RNA–Protein interactions for RNA: ENST00000404284.6

TOM1-203, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1, Length 2,622 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-203ENST00000404284 CALN1Q9BXU9 219 aa16.37■□□□□ 0.21
TOM1-203ENST00000404284 RPF1Q9H9Y2 349 aaKnown RBP16.37■□□□□ 0.21
TOM1-203ENST00000404284 NPHS2Q9NP85 383 aa16.37■□□□□ 0.21
TOM1-203ENST00000404284 ENDOD1O94919 500 aa16.37■□□□□ 0.21
TOM1-203ENST00000404284 IL18RAPO95256 599 aa16.37■□□□□ 0.21
TOM1-203ENST00000404284 CBX6O95503 412 aa16.37■□□□□ 0.21
TOM1-203ENST00000404284 ROR2Q01974 943 aaKnown RBP16.37■□□□□ 0.21
TOM1-203ENST00000404284 ACAP1Q15027 740 aa16.37■□□□□ 0.21
TOM1-203ENST00000404284 NOMO1Q15155 1222 aa16.37■□□□□ 0.21
TOM1-203ENST00000404284 SLC45A4Q5BKX6 768 aa16.37■□□□□ 0.21
TOM1-203ENST00000404284 TRNP1Q6NT89 227 aa16.37■□□□□ 0.21
TOM1-203ENST00000404284 NPNTQ6UXI9 565 aa16.37■□□□□ 0.21
TOM1-203ENST00000404284 PLPPR4Q7Z2D5 763 aa16.37■□□□□ 0.21
TOM1-203ENST00000404284 FBXO41Q8TF61 875 aa16.37■□□□□ 0.21
TOM1-203ENST00000404284 ALKBH8Q96BT7 664 aaKnown RBP16.37■□□□□ 0.21
TOM1-203ENST00000404284 FGD4Q96M96 766 aa16.37■□□□□ 0.21
TOM1-203ENST00000404284 TNFSF13BQ9Y275 285 aa16.37■□□□□ 0.21
TOM1-203ENST00000404284 A0A1B0GVG6 124 aa16.36■□□□□ 0.21
TOM1-203ENST00000404284 WDR91A4D1P6 747 aa16.36■□□□□ 0.21
TOM1-203ENST00000404284 M0QYV0 167 aa16.36■□□□□ 0.21
TOM1-203ENST00000404284 GPR25O00155 361 aa16.36■□□□□ 0.21
TOM1-203ENST00000404284 RNF8O76064 485 aa16.36■□□□□ 0.21
TOM1-203ENST00000404284 ELK3P41970 407 aa16.36■□□□□ 0.21
TOM1-203ENST00000404284 GPD2P43304 727 aa16.36■□□□□ 0.21
TOM1-203ENST00000404284 CLCN3P51790 818 aa16.36■□□□□ 0.21
TOM1-203ENST00000404284 VGLL4Q14135 290 aa16.36■□□□□ 0.21
TOM1-203ENST00000404284 RAB6CQ53S08 254 aa16.36■□□□□ 0.21
TOM1-203ENST00000404284 CELF3Q5SZQ8 465 aaKnown RBP16.36■□□□□ 0.21
TOM1-203ENST00000404284 SH3PXD2AQ5TCZ1 1133 aa16.36■□□□□ 0.21
TOM1-203ENST00000404284 ZNF449Q6P9G9 518 aa16.36■□□□□ 0.21
TOM1-203ENST00000404284 DEFB132Q7Z7B7 95 aa16.36■□□□□ 0.21
TOM1-203ENST00000404284 EXOC8Q8IYI6 725 aa16.36■□□□□ 0.21
TOM1-203ENST00000404284 ZNF398Q8TD17 642 aa16.36■□□□□ 0.21
TOM1-203ENST00000404284 PTPRN2Q92932 1015 aa16.36■□□□□ 0.21
TOM1-203ENST00000404284 TMEM176AQ96HP8 235 aa16.36■□□□□ 0.21
TOM1-203ENST00000404284 RAB6CQ9H0N0 254 aa16.36■□□□□ 0.21
TOM1-203ENST00000404284 RSAD1Q9HA92 442 aa16.36■□□□□ 0.21
TOM1-203ENST00000404284 LTBP3Q9NS15 1303 aa16.36■□□□□ 0.21
TOM1-203ENST00000404284 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.36■□□□□ 0.21
TOM1-203ENST00000404284 DPPA5A6NC42 116 aa16.36■□□□□ 0.21
TOM1-203ENST00000404284 LIN7AO14910 233 aaPredicted RBP16.36■□□□□ 0.21
TOM1-203ENST00000404284 USP2O75604 605 aaPredicted RBP16.36■□□□□ 0.21
TOM1-203ENST00000404284 ITGB3P05106 788 aa16.36■□□□□ 0.21
TOM1-203ENST00000404284 PCK1P35558 622 aa16.36■□□□□ 0.21
TOM1-203ENST00000404284 KCNJ11Q14654 390 aa16.36■□□□□ 0.21
TOM1-203ENST00000404284 TMEM132AQ24JP5 1023 aa16.36■□□□□ 0.21
TOM1-203ENST00000404284 TAF1BQ53T94 588 aaPredicted RBP16.36■□□□□ 0.21
TOM1-203ENST00000404284 FAM102AQ5T9C2 384 aaPredicted RBP16.36■□□□□ 0.21
TOM1-203ENST00000404284 JADE1Q6IE81 842 aa16.36■□□□□ 0.21
TOM1-203ENST00000404284 CYTH2Q99418 400 aa16.36■□□□□ 0.21
TOM1-203ENST00000404284 VPS11Q9H270 941 aa16.36■□□□□ 0.21
TOM1-203ENST00000404284 PIDD1Q9HB75 910 aa16.36■□□□□ 0.21
TOM1-203ENST00000404284 TCRBV9S1A1TA0A576 114 aa16.35■□□□□ 0.21
TOM1-203ENST00000404284 LACTBL1A8MY62 500 aa16.35■□□□□ 0.21
TOM1-203ENST00000404284 NOP56O00567 594 aaKnown RBP16.35■□□□□ 0.21
TOM1-203ENST00000404284 TRAFD1O14545 582 aaPredicted RBP16.35■□□□□ 0.21
TOM1-203ENST00000404284 DHRS4L1P0CG22 281 aa16.35■□□□□ 0.21
TOM1-203ENST00000404284 ZNF143P52747 638 aaPredicted RBP16.35■□□□□ 0.21
TOM1-203ENST00000404284 ROR1Q01973 937 aa16.35■□□□□ 0.21
TOM1-203ENST00000404284 CTC1Q2NKJ3 1217 aa16.35■□□□□ 0.21
TOM1-203ENST00000404284 FYB2Q5VWT5 728 aa16.35■□□□□ 0.21
TOM1-203ENST00000404284 TRIM68Q6AZZ1 485 aa16.35■□□□□ 0.21
TOM1-203ENST00000404284 RFWD2Q8NHY2 731 aa16.35■□□□□ 0.21
TOM1-203ENST00000404284 ADPGKQ9BRR6 497 aa16.35■□□□□ 0.21
TOM1-203ENST00000404284 TBC1D10AQ9BXI6 508 aa16.35■□□□□ 0.21
TOM1-203ENST00000404284 PPP2R3BQ9Y5P8 575 aa16.35■□□□□ 0.21
TOM1-203ENST00000404284 TEX264Q9Y6I9 313 aa16.35■□□□□ 0.21
TOM1-203ENST00000404284 UTRNP46939 3433 aa16.35■□□□□ 0.21
TOM1-203ENST00000404284 KBTBD13C9JR72 458 aa16.35■□□□□ 0.21
TOM1-203ENST00000404284 PYGBP11216 843 aa16.35■□□□□ 0.21
TOM1-203ENST00000404284 ATP2A2P16615 1042 aaKnown RBP16.35■□□□□ 0.21
TOM1-203ENST00000404284 ETV4P43268 484 aa16.35■□□□□ 0.21
TOM1-203ENST00000404284 ANKRD20A2Q5SQ80 823 aa16.35■□□□□ 0.21
TOM1-203ENST00000404284 ANKRD20A1Q5TYW2 823 aa16.35■□□□□ 0.21
TOM1-203ENST00000404284 ANKRD20A3Q5VUR7 823 aa16.35■□□□□ 0.21
TOM1-203ENST00000404284 SH2D5Q6ZV89 423 aa16.35■□□□□ 0.21
TOM1-203ENST00000404284 ZC3H18Q86VM9 953 aaKnown RBP16.35■□□□□ 0.21
TOM1-203ENST00000404284 FAM13CQ8NE31 585 aa16.35■□□□□ 0.21
TOM1-203ENST00000404284 SLC44A1Q8WWI5 657 aa16.35■□□□□ 0.21
TOM1-203ENST00000404284 EVPLQ92817 2033 aa16.35■□□□□ 0.21
TOM1-203ENST00000404284 PIWIL1Q96J94 861 aaKnown RBP16.35■□□□□ 0.21
TOM1-203ENST00000404284 SERAC1Q96JX3 654 aa16.35■□□□□ 0.21
TOM1-203ENST00000404284 ASCC2Q9H1I8 757 aaPredicted RBP16.35■□□□□ 0.21
TOM1-203ENST00000404284 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.35■□□□□ 0.21
TOM1-203ENST00000404284 ASNSD1Q9NWL6 643 aa16.35■□□□□ 0.21
TOM1-203ENST00000404284 CHCHD3Q9NX63 227 aaKnown RBP16.35■□□□□ 0.21
TOM1-203ENST00000404284 ZFP69BQ9UJL9 534 aa16.35■□□□□ 0.21
TOM1-203ENST00000404284 COQ9O75208 318 aa16.34■□□□□ 0.21
TOM1-203ENST00000404284 GM2AP17900 193 aa16.34■□□□□ 0.21
TOM1-203ENST00000404284 NEK3P51956 506 aa16.34■□□□□ 0.21
TOM1-203ENST00000404284 CDH6P55285 790 aa16.34■□□□□ 0.21
TOM1-203ENST00000404284 OVGP1Q12889 678 aa16.34■□□□□ 0.21
TOM1-203ENST00000404284 PTK7Q13308 1070 aa16.34■□□□□ 0.21
TOM1-203ENST00000404284 SEPT7Q16181 437 aaKnown RBP16.34■□□□□ 0.21
TOM1-203ENST00000404284 KBTBD12Q3ZCT8 623 aa16.34■□□□□ 0.21
TOM1-203ENST00000404284 FAM182AQ5T1J6 154 aa16.34■□□□□ 0.21
TOM1-203ENST00000404284 CLNKQ7Z7G1 428 aa16.34■□□□□ 0.21
TOM1-203ENST00000404284 KCNV2Q8TDN2 545 aa16.34■□□□□ 0.21
TOM1-203ENST00000404284 MANSC1Q9H8J5 431 aa16.34■□□□□ 0.21
TOM1-203ENST00000404284 VRTNQ9H8Y1 702 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms