RNA–Protein interactions for RNA: ENST00000403542.6

RBM39-206, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-206ENST00000403542 NFICP08651 508 aa12.49□□□□□ -0.41
RBM39-206ENST00000403542 KRT7P08729 469 aa12.49□□□□□ -0.41
RBM39-206ENST00000403542 DLDP09622 509 aaKnown RBP12.49□□□□□ -0.41
RBM39-206ENST00000403542 GRIA1P42261 906 aa12.49□□□□□ -0.41
RBM39-206ENST00000403542 CLCN3P51790 818 aa12.49□□□□□ -0.41
RBM39-206ENST00000403542 LAMTOR4Q0VGL1 99 aa12.49□□□□□ -0.41
RBM39-206ENST00000403542 CHI3L2Q15782 390 aa12.49□□□□□ -0.41
RBM39-206ENST00000403542 CCDC142Q17RM4 750 aa12.49□□□□□ -0.41
RBM39-206ENST00000403542 LRRC38Q5VT99 294 aa12.49□□□□□ -0.41
RBM39-206ENST00000403542 CIAPIN1Q6FI81 312 aa12.49□□□□□ -0.41
RBM39-206ENST00000403542 OR6B2Q6IFH4 312 aa12.49□□□□□ -0.41
RBM39-206ENST00000403542 TRMT10BQ6PF06 316 aaKnown RBP12.49□□□□□ -0.41
RBM39-206ENST00000403542 TREML1Q86YW5 311 aa12.49□□□□□ -0.41
RBM39-206ENST00000403542 RTKN2Q8IZC4 609 aa12.49□□□□□ -0.41
RBM39-206ENST00000403542 SPDYE1Q8NFV5 336 aaPredicted RBP12.49□□□□□ -0.41
RBM39-206ENST00000403542 STMN2Q93045 179 aa12.49□□□□□ -0.41
RBM39-206ENST00000403542 TTC1Q99614 292 aa12.49□□□□□ -0.41
RBM39-206ENST00000403542 TEX13BQ9BXU2 312 aa12.49□□□□□ -0.41
RBM39-206ENST00000403542 MAFBQ9Y5Q3 323 aaPredicted RBP12.49□□□□□ -0.41
RBM39-206ENST00000403542 NFASCO94856 1347 aa12.49□□□□□ -0.41
RBM39-206ENST00000403542 USP1O94782 785 aa12.48□□□□□ -0.41
RBM39-206ENST00000403542 RBL1P28749 1068 aa12.48□□□□□ -0.41
RBM39-206ENST00000403542 PGM1P36871 562 aa12.48□□□□□ -0.41
RBM39-206ENST00000403542 GHRHRQ02643 423 aa12.48□□□□□ -0.41
RBM39-206ENST00000403542 BST1Q10588 318 aa12.48□□□□□ -0.41
RBM39-206ENST00000403542 TSNAXIP1Q2TAA8 658 aa12.48□□□□□ -0.41
RBM39-206ENST00000403542 C16orf46Q6P387 395 aa12.48□□□□□ -0.41
RBM39-206ENST00000403542 ISLR2Q6UXK2 745 aa12.48□□□□□ -0.41
RBM39-206ENST00000403542 PCGF5Q86SE9 256 aa12.48□□□□□ -0.41
RBM39-206ENST00000403542 XYLT1Q86Y38 959 aa12.48□□□□□ -0.41
RBM39-206ENST00000403542 WDR49Q8IV35 697 aa12.48□□□□□ -0.41
RBM39-206ENST00000403542 LMNTD2Q8IXW0 634 aa12.48□□□□□ -0.41
RBM39-206ENST00000403542 EFCAB3Q8N7B9 438 aa12.48□□□□□ -0.41
RBM39-206ENST00000403542 HIPK4Q8NE63 616 aa12.48□□□□□ -0.41
RBM39-206ENST00000403542 OXNAD1Q96HP4 312 aaPredicted RBP12.48□□□□□ -0.41
RBM39-206ENST00000403542 MRPL4Q9BYD3 311 aaKnown RBP12.48□□□□□ -0.41
RBM39-206ENST00000403542 C20orf27Q9GZN8 174 aa12.48□□□□□ -0.41
RBM39-206ENST00000403542 XYLT2Q9H1B5 865 aa12.48□□□□□ -0.41
RBM39-206ENST00000403542 DCLRE1BQ9H816 532 aa12.48□□□□□ -0.41
RBM39-206ENST00000403542 LRRC42Q9Y546 428 aa12.48□□□□□ -0.41
RBM39-206ENST00000403542 MYO18AQ92614 2054 aaKnown RBP12.48□□□□□ -0.41
RBM39-206ENST00000403542 IQANK1A0A1B0GTG1 560 aa12.48□□□□□ -0.41
RBM39-206ENST00000403542 SIGLEC16A6NMB1 481 aa12.48□□□□□ -0.41
RBM39-206ENST00000403542 MAFGO15525 162 aa12.48□□□□□ -0.41
RBM39-206ENST00000403542 SMIM24O75264 130 aa12.48□□□□□ -0.41
RBM39-206ENST00000403542 WFS1O76024 890 aa12.48□□□□□ -0.41
RBM39-206ENST00000403542 HMGCRP04035 888 aa12.48□□□□□ -0.41
RBM39-206ENST00000403542 HOXC6P09630 235 aa12.48□□□□□ -0.41
RBM39-206ENST00000403542 UBTFL6P0CB48 400 aaPredicted RBP12.48□□□□□ -0.41
RBM39-206ENST00000403542 PDGFRAP16234 1089 aa12.48□□□□□ -0.41
RBM39-206ENST00000403542 PTPRAP18433 802 aa12.48□□□□□ -0.41
RBM39-206ENST00000403542 ATP6V1C1P21283 382 aa12.48□□□□□ -0.41
RBM39-206ENST00000403542 EIF4BP23588 611 aaKnown RBP12.48□□□□□ -0.41
RBM39-206ENST00000403542 CDK16Q00536 496 aa12.48□□□□□ -0.41
RBM39-206ENST00000403542 UBAP2LQ14157 1087 aaKnown RBP12.48□□□□□ -0.41
RBM39-206ENST00000403542 KRT81Q14533 505 aa12.48□□□□□ -0.41
RBM39-206ENST00000403542 FKBP1CQ5VVH2 108 aa12.48□□□□□ -0.41
RBM39-206ENST00000403542 MICALL2Q8IY33 904 aa12.48□□□□□ -0.41
RBM39-206ENST00000403542 MPP5Q8N3R9 675 aa12.48□□□□□ -0.41
RBM39-206ENST00000403542 CNKSR2Q8WXI2 1034 aa12.48□□□□□ -0.41
RBM39-206ENST00000403542 PTCD3Q96EY7 689 aaKnown RBP12.48□□□□□ -0.41
RBM39-206ENST00000403542 LPIN3Q9BQK8 851 aa12.48□□□□□ -0.41
RBM39-206ENST00000403542 THTPAQ9BU02 230 aa12.48□□□□□ -0.41
RBM39-206ENST00000403542 CEP41Q9BYV8 373 aa12.48□□□□□ -0.41
RBM39-206ENST00000403542 MINDY3Q9H8M7 445 aa12.48□□□□□ -0.41
RBM39-206ENST00000403542 ZC3H7BQ9UGR2 993 aaKnown RBP12.48□□□□□ -0.41
RBM39-206ENST00000403542 MAGED2Q9UNF1 606 aaPredicted RBP12.48□□□□□ -0.41
RBM39-206ENST00000403542 PLSCR1O15162 318 aa12.48□□□□□ -0.41
RBM39-206ENST00000403542 FAM189A1O60320 539 aa12.48□□□□□ -0.41
RBM39-206ENST00000403542 LUC7L3O95232 432 aaKnown RBP12.48□□□□□ -0.41
RBM39-206ENST00000403542 LSM8O95777 96 aaKnown RBP12.48□□□□□ -0.41
RBM39-206ENST00000403542 ZCCHC18P0CG32 403 aa12.48□□□□□ -0.41
RBM39-206ENST00000403542 POLR2BP30876 1174 aaKnown RBP12.48□□□□□ -0.41
RBM39-206ENST00000403542 ATXN1P54253 815 aaKnown RBP12.48□□□□□ -0.41
RBM39-206ENST00000403542 AQP5P55064 265 aa12.48□□□□□ -0.41
RBM39-206ENST00000403542 MCCD1P59942 119 aaPredicted RBP12.48□□□□□ -0.41
RBM39-206ENST00000403542 YWHAEP62258 255 aaKnown RBP12.48□□□□□ -0.41
RBM39-206ENST00000403542 HSDL1Q3SXM5 330 aa12.48□□□□□ -0.41
RBM39-206ENST00000403542 WDR78Q5VTH9 848 aa12.48□□□□□ -0.41
RBM39-206ENST00000403542 TRNP1Q6NT89 227 aa12.48□□□□□ -0.41
RBM39-206ENST00000403542 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.48□□□□□ -0.416e-6■■■□□ 15.3
RBM39-206ENST00000403542 UBR7Q8N806 425 aa12.48□□□□□ -0.41
RBM39-206ENST00000403542 PHC3Q8NDX5 983 aa12.48□□□□□ -0.41
RBM39-206ENST00000403542 REPS2Q8NFH8 660 aa12.48□□□□□ -0.41
RBM39-206ENST00000403542 JDP2Q8WYK2 163 aa12.48□□□□□ -0.41
RBM39-206ENST00000403542 USP6NLQ92738 828 aa12.48□□□□□ -0.41
RBM39-206ENST00000403542 APOPT1Q96IL0 206 aa12.48□□□□□ -0.41
RBM39-206ENST00000403542 CDHR1Q96JP9 859 aa12.48□□□□□ -0.41
RBM39-206ENST00000403542 ACO2Q99798 780 aaKnown RBP12.48□□□□□ -0.41
RBM39-206ENST00000403542 EBF4Q9BQW3 602 aa12.48□□□□□ -0.41
RBM39-206ENST00000403542 VPS11Q9H270 941 aa12.48□□□□□ -0.41
RBM39-206ENST00000403542 SMYD2Q9NRG4 433 aa12.48□□□□□ -0.41
RBM39-206ENST00000403542 MAP3K20Q9NYL2 800 aaKnown RBP12.48□□□□□ -0.41
RBM39-206ENST00000403542 APOC4-APOC2K7ER74 178 aa12.47□□□□□ -0.41
RBM39-206ENST00000403542 OGTO15294 1046 aa12.47□□□□□ -0.41
RBM39-206ENST00000403542 TM9SF1O15321 606 aa12.47□□□□□ -0.41
RBM39-206ENST00000403542 MICAL2O94851 1124 aa12.47□□□□□ -0.41
RBM39-206ENST00000403542 TNNC2P02585 160 aa12.47□□□□□ -0.41
RBM39-206ENST00000403542 APOC2P02655 101 aa12.47□□□□□ -0.41
RBM39-206ENST00000403542 PGK2P07205 417 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms