RNA–Protein interactions for RNA: ENST00000402989.5

SMC6-203, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMC6, Length 3,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-203ENST00000402989 FGD4Q96M96 766 aa4.55□□□□□ -1.68
SMC6-203ENST00000402989 TMEM109Q9BVC6 243 aa4.55□□□□□ -1.68
SMC6-203ENST00000402989 EIF2AQ9BY44 585 aaKnown RBP4.55□□□□□ -1.68
SMC6-203ENST00000402989 ZNF395Q9H8N7 513 aaPredicted RBP4.55□□□□□ -1.68
SMC6-203ENST00000402989 CDHR5Q9HBB8 845 aa4.55□□□□□ -1.68
SMC6-203ENST00000402989 PRMT7Q9NVM4 692 aaPredicted RBP4.55□□□□□ -1.68
SMC6-203ENST00000402989 HESX1Q9UBX0 185 aa4.55□□□□□ -1.68
SMC6-203ENST00000402989 RLFQ13129 1914 aa4.55□□□□□ -1.68
SMC6-203ENST00000402989 PDE4DIPQ5VU43 2346 aa4.55□□□□□ -1.68
SMC6-203ENST00000402989 PARP14Q460N5 1801 aa4.55□□□□□ -1.68
SMC6-203ENST00000402989 CFAP69A5D8W1 941 aa4.55□□□□□ -1.68
SMC6-203ENST00000402989 H3BRB1 525 aa4.55□□□□□ -1.68
SMC6-203ENST00000402989 CREB3O43889 395 aa4.55□□□□□ -1.68
SMC6-203ENST00000402989 CILPO75339 1184 aa4.55□□□□□ -1.68
SMC6-203ENST00000402989 C22orf31O95567 290 aa4.55□□□□□ -1.68
SMC6-203ENST00000402989 TRUB2O95900 331 aaKnown RBP4.55□□□□□ -1.68
SMC6-203ENST00000402989 FGFR1P11362 822 aa4.55□□□□□ -1.68
SMC6-203ENST00000402989 P4HA1P13674 534 aa4.55□□□□□ -1.68
SMC6-203ENST00000402989 SDC4P31431 198 aa4.55□□□□□ -1.68
SMC6-203ENST00000402989 GRIA1P42261 906 aa4.55□□□□□ -1.68
SMC6-203ENST00000402989 ABCG1P45844 678 aa4.55□□□□□ -1.68
SMC6-203ENST00000402989 AP3M2P53677 418 aa4.55□□□□□ -1.68
SMC6-203ENST00000402989 SESN2P58004 480 aaPredicted RBP4.55□□□□□ -1.68
SMC6-203ENST00000402989 NME3Q13232 169 aa4.55□□□□□ -1.68
SMC6-203ENST00000402989 DPYSL3Q14195 570 aa4.55□□□□□ -1.68
SMC6-203ENST00000402989 SURF1Q15526 300 aa4.55□□□□□ -1.68
SMC6-203ENST00000402989 ZNF618Q5T7W0 954 aa4.55□□□□□ -1.68
SMC6-203ENST00000402989 MROH9Q5TGP6 573 aa4.55□□□□□ -1.68
SMC6-203ENST00000402989 CES3Q6UWW8 571 aa4.55□□□□□ -1.68
SMC6-203ENST00000402989 ZCCHC23Q6ZST2 131 aa4.55□□□□□ -1.68
SMC6-203ENST00000402989 TSHZ1Q6ZSZ6 1077 aa4.55□□□□□ -1.68
SMC6-203ENST00000402989 ILDR2Q71H61 639 aa4.55□□□□□ -1.68
SMC6-203ENST00000402989 MTDHQ86UE4 582 aaKnown RBP4.55□□□□□ -1.68
SMC6-203ENST00000402989 HACE1Q8IYU2 909 aa4.55□□□□□ -1.68
SMC6-203ENST00000402989 ANKRD13AQ8IZ07 590 aa4.55□□□□□ -1.68
SMC6-203ENST00000402989 UNC5BQ8IZJ1 945 aa4.55□□□□□ -1.68
SMC6-203ENST00000402989 PYROXD2Q8N2H3 581 aa4.55□□□□□ -1.68
SMC6-203ENST00000402989 NME8Q8N427 588 aa4.55□□□□□ -1.68
SMC6-203ENST00000402989 CCNYQ8ND76 341 aa4.55□□□□□ -1.68
SMC6-203ENST00000402989 RFWD2Q8NHY2 731 aa4.55□□□□□ -1.68
SMC6-203ENST00000402989 AGAP11Q8TF27 550 aa4.55□□□□□ -1.68
SMC6-203ENST00000402989 SLC10A4Q96EP9 437 aa4.55□□□□□ -1.68
SMC6-203ENST00000402989 TTC25Q96NG3 672 aa4.55□□□□□ -1.68
SMC6-203ENST00000402989 LRRC37BQ96QE4 947 aa4.55□□□□□ -1.68
SMC6-203ENST00000402989 NT5C1AQ9BXI3 368 aa4.55□□□□□ -1.68
SMC6-203ENST00000402989 NXF3Q9H4D5 531 aaKnown RBP4.55□□□□□ -1.68
SMC6-203ENST00000402989 TUT1Q9H6E5 874 aaKnown RBP4.55□□□□□ -1.68
SMC6-203ENST00000402989 IFT122Q9HBG6 1241 aa4.55□□□□□ -1.68
SMC6-203ENST00000402989 PCMTD2Q9NV79 361 aa4.55□□□□□ -1.68
SMC6-203ENST00000402989 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.55□□□□□ -1.68
SMC6-203ENST00000402989 LAMA2P24043 3122 aaKnown RBP4.54□□□□□ -1.68
SMC6-203ENST00000402989 TRIM49D1C9J1S8 452 aa4.54□□□□□ -1.68
SMC6-203ENST00000402989 CLDN5O00501 218 aa4.54□□□□□ -1.68
SMC6-203ENST00000402989 ABLIM1O14639 778 aa4.54□□□□□ -1.68
SMC6-203ENST00000402989 DIAPH2O60879 1101 aa4.54□□□□□ -1.68
SMC6-203ENST00000402989 TGFB3P10600 412 aa4.54□□□□□ -1.68
SMC6-203ENST00000402989 ATP2A2P16615 1042 aaKnown RBP4.54□□□□□ -1.68
SMC6-203ENST00000402989 EPHB2P29323 1055 aa4.54□□□□□ -1.68
SMC6-203ENST00000402989 ZNF200P98182 395 aaPredicted RBP4.54□□□□□ -1.68
SMC6-203ENST00000402989 GBE1Q04446 702 aa4.54□□□□□ -1.68
SMC6-203ENST00000402989 TAF1BQ53T94 588 aaPredicted RBP4.54□□□□□ -1.68
SMC6-203ENST00000402989 C9orf131Q5VYM1 1079 aa4.54□□□□□ -1.68
SMC6-203ENST00000402989 CDCA2Q69YH5 1023 aaPredicted RBP4.54□□□□□ -1.68
SMC6-203ENST00000402989 DENND5BQ6ZUT9 1274 aa4.54□□□□□ -1.68
SMC6-203ENST00000402989 BBS12Q6ZW61 710 aa4.54□□□□□ -1.68
SMC6-203ENST00000402989 UBR7Q8N806 425 aa4.54□□□□□ -1.68
SMC6-203ENST00000402989 OR6J1Q8NGC5 347 aa4.54□□□□□ -1.68
SMC6-203ENST00000402989 SLC35B2Q8TB61 432 aa4.54□□□□□ -1.68
SMC6-203ENST00000402989 CCHCR1Q8TD31 782 aa4.54□□□□□ -1.68
SMC6-203ENST00000402989 TMEM174Q8WUU8 243 aa4.54□□□□□ -1.68
SMC6-203ENST00000402989 ZNF75CPQ92670 426 aaPredicted RBP4.54□□□□□ -1.68
SMC6-203ENST00000402989 AGAP3Q96P47 875 aa4.54□□□□□ -1.68
SMC6-203ENST00000402989 WDR83Q9BRX9 315 aaKnown RBP4.54□□□□□ -1.68
SMC6-203ENST00000402989 FAM167BQ9BTA0 163 aa4.54□□□□□ -1.68
SMC6-203ENST00000402989 SNRNP25Q9BV90 132 aaKnown RBP4.54□□□□□ -1.68
SMC6-203ENST00000402989 FZD8Q9H461 694 aa4.54□□□□□ -1.68
SMC6-203ENST00000402989 ACSS2Q9NR19 701 aa4.54□□□□□ -1.68
SMC6-203ENST00000402989 FBXO6Q9NRD1 293 aaPredicted RBP4.54□□□□□ -1.68
SMC6-203ENST00000402989 ADARB2Q9NS39 739 aaKnown RBP4.54□□□□□ -1.68
SMC6-203ENST00000402989 ARMCX1Q9P291 453 aa4.54□□□□□ -1.68
SMC6-203ENST00000402989 RABGEF1Q9UJ41 708 aa4.54□□□□□ -1.68
SMC6-203ENST00000402989 SHOC2Q9UQ13 582 aa4.54□□□□□ -1.68
SMC6-203ENST00000402989 PIN4Q9Y237 131 aaKnown RBP4.54□□□□□ -1.68
SMC6-203ENST00000402989 TIMM13Q9Y5L4 95 aaPredicted RBP4.54□□□□□ -1.68
SMC6-203ENST00000402989 MGAMO43451 1857 aa4.54□□□□□ -1.68
SMC6-203ENST00000402989 LCTP09848 1927 aa4.54□□□□□ -1.68
SMC6-203ENST00000402989 SCN1AP35498 2009 aa4.54□□□□□ -1.68
SMC6-203ENST00000402989 A6NJR5 290 aa4.54□□□□□ -1.68
SMC6-203ENST00000402989 C3orf70A6NLC5 250 aaPredicted RBP4.54□□□□□ -1.68
SMC6-203ENST00000402989 SRRM3A6NNA2 597 aaPredicted RBP4.54□□□□□ -1.68
SMC6-203ENST00000402989 APOL1O14791 398 aa4.54□□□□□ -1.68
SMC6-203ENST00000402989 ALOX15BO15296 676 aa4.54□□□□□ -1.68
SMC6-203ENST00000402989 B4GALT4O60513 344 aa4.54□□□□□ -1.68
SMC6-203ENST00000402989 UPP2O95045 317 aa4.54□□□□□ -1.68
SMC6-203ENST00000402989 IL18RAPO95256 599 aa4.54□□□□□ -1.68
SMC6-203ENST00000402989 ITGAVP06756 1048 aa4.54□□□□□ -1.68
SMC6-203ENST00000402989 RARBP10826 455 aa4.54□□□□□ -1.68
SMC6-203ENST00000402989 SAT1P21673 171 aa4.54□□□□□ -1.68
SMC6-203ENST00000402989 AMPD1P23109 780 aa4.54□□□□□ -1.68
SMC6-203ENST00000402989 EDNRBP24530 442 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms