RNA–Protein interactions for RNA: ENST00000402667.1

DNMT3A-205, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene DNMT3A, Length 2,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-205ENST00000402667 SCN4AP35499 1836 aa17.7■□□□□ 0.42
DNMT3A-205ENST00000402667 A6NJR5 290 aa17.7■□□□□ 0.42
DNMT3A-205ENST00000402667 SPAG7O75391 227 aa17.7■□□□□ 0.42
DNMT3A-205ENST00000402667 SETSIPP0DME0 302 aa17.7■□□□□ 0.42
DNMT3A-205ENST00000402667 KRT15P19012 456 aa17.7■□□□□ 0.42
DNMT3A-205ENST00000402667 IL4RP24394 825 aa17.7■□□□□ 0.42
DNMT3A-205ENST00000402667 WDR4P57081 412 aaKnown RBP17.7■□□□□ 0.42
DNMT3A-205ENST00000402667 KRT81Q14533 505 aa17.7■□□□□ 0.42
DNMT3A-205ENST00000402667 RASA2Q15283 850 aa17.7■□□□□ 0.42
DNMT3A-205ENST00000402667 SOWAHAQ2M3V2 549 aa17.7■□□□□ 0.42
DNMT3A-205ENST00000402667 BOLA3Q53S33 107 aa17.7■□□□□ 0.42
DNMT3A-205ENST00000402667 FAM47CQ5HY64 1035 aa17.7■□□□□ 0.42
DNMT3A-205ENST00000402667 OR6B3Q8NGW1 331 aa17.7■□□□□ 0.42
DNMT3A-205ENST00000402667 PARK7Q99497 189 aaKnown RBP17.7■□□□□ 0.42
DNMT3A-205ENST00000402667 LPIN3Q9BQK8 851 aa17.7■□□□□ 0.42
DNMT3A-205ENST00000402667 NXF3Q9H4D5 531 aaKnown RBP17.7■□□□□ 0.42
DNMT3A-205ENST00000402667 TRABDQ9H4I3 376 aa17.7■□□□□ 0.42
DNMT3A-205ENST00000402667 HESX1Q9UBX0 185 aa17.7■□□□□ 0.42
DNMT3A-205ENST00000402667 XPO7Q9UIA9 1087 aaKnown RBP17.7■□□□□ 0.42
DNMT3A-205ENST00000402667 GJD2Q9UKL4 321 aa17.7■□□□□ 0.42
DNMT3A-205ENST00000402667 USP15Q9Y4E8 981 aaPredicted RBP17.7■□□□□ 0.42
DNMT3A-205ENST00000402667 SMAPO00193 183 aa17.7■□□□□ 0.42
DNMT3A-205ENST00000402667 PAPSS1O43252 624 aaPredicted RBP17.7■□□□□ 0.42
DNMT3A-205ENST00000402667 RECQL4O94761 1208 aa17.7■□□□□ 0.42
DNMT3A-205ENST00000402667 F2P00734 622 aa17.7■□□□□ 0.42
DNMT3A-205ENST00000402667 CYP2C9P11712 490 aa17.7■□□□□ 0.42
DNMT3A-205ENST00000402667 DARSP14868 501 aaKnown RBP17.7■□□□□ 0.42
DNMT3A-205ENST00000402667 SDC4P31431 198 aa17.7■□□□□ 0.42
DNMT3A-205ENST00000402667 BASP1P80723 227 aaKnown RBP17.7■□□□□ 0.42
DNMT3A-205ENST00000402667 ZC3H12AQ5D1E8 599 aaKnown RBP17.7■□□□□ 0.42
DNMT3A-205ENST00000402667 EFHC2Q5JST6 749 aa17.7■□□□□ 0.42
DNMT3A-205ENST00000402667 C9orf57Q5W0N0 161 aa17.7■□□□□ 0.42
DNMT3A-205ENST00000402667 C1orf228Q6PIY5 440 aa17.7■□□□□ 0.42
DNMT3A-205ENST00000402667 C3orf62Q6ZUJ4 267 aa17.7■□□□□ 0.42
DNMT3A-205ENST00000402667 MAP7D3Q8IWC1 876 aa17.7■□□□□ 0.42
DNMT3A-205ENST00000402667 ATP11CQ8NB49 1132 aa17.7■□□□□ 0.42
DNMT3A-205ENST00000402667 FAM172AQ8WUF8 416 aa17.7■□□□□ 0.42
DNMT3A-205ENST00000402667 B3GNT5Q9BYG0 378 aa17.7■□□□□ 0.42
DNMT3A-205ENST00000402667 DPEP3Q9H4B8 488 aa17.7■□□□□ 0.42
DNMT3A-205ENST00000402667 KIF9Q9HAQ2 790 aa17.7■□□□□ 0.42
DNMT3A-205ENST00000402667 GPATCH2LQ9NWQ4 482 aa17.7■□□□□ 0.42
DNMT3A-205ENST00000402667 CNTN3Q9P232 1028 aa17.7■□□□□ 0.42
DNMT3A-205ENST00000402667 SMIM35A0A1B0GVV1 85 aa17.69■□□□□ 0.42
DNMT3A-205ENST00000402667 AKAP5P24588 427 aa17.69■□□□□ 0.42
DNMT3A-205ENST00000402667 PHBP35232 272 aa17.69■□□□□ 0.42
DNMT3A-205ENST00000402667 GEMIN4P57678 1058 aaKnown RBP17.69■□□□□ 0.42
DNMT3A-205ENST00000402667 MTM1Q13496 603 aa17.69■□□□□ 0.42
DNMT3A-205ENST00000402667 PDK2Q15119 407 aa17.69■□□□□ 0.42
DNMT3A-205ENST00000402667 TRPM8Q7Z2W7 1104 aa17.69■□□□□ 0.42
DNMT3A-205ENST00000402667 SESTD1Q86VW0 696 aa17.69■□□□□ 0.42
DNMT3A-205ENST00000402667 UNC93AQ86WB7 457 aa17.69■□□□□ 0.42
DNMT3A-205ENST00000402667 FBXO36Q8NEA4 188 aa17.69■□□□□ 0.42
DNMT3A-205ENST00000402667 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.69■□□□□ 0.42
DNMT3A-205ENST00000402667 APOL6Q9BWW8 343 aa17.69■□□□□ 0.42
DNMT3A-205ENST00000402667 TRIM6Q9C030 488 aaPredicted RBP17.69■□□□□ 0.42
DNMT3A-205ENST00000402667 PSMC3IPQ9P2W1 217 aaPredicted RBP17.69■□□□□ 0.42
DNMT3A-205ENST00000402667 PCNTO95613 3336 aa17.69■□□□□ 0.42
DNMT3A-205ENST00000402667 RALGAPA2Q2PPJ7 1873 aa17.69■□□□□ 0.42
DNMT3A-205ENST00000402667 MBLAC1A4D2B0 266 aaPredicted RBP17.69■□□□□ 0.42
DNMT3A-205ENST00000402667 SLC15A5A6NIM6 579 aa17.69■□□□□ 0.42
DNMT3A-205ENST00000402667 PRPF4O43172 522 aaKnown RBP eCLIP17.69■□□□□ 0.421e-6■■■■□ 22
DNMT3A-205ENST00000402667 HCRTO43612 131 aa17.69■□□□□ 0.42
DNMT3A-205ENST00000402667 ECM2O94769 699 aaPredicted RBP17.69■□□□□ 0.42
DNMT3A-205ENST00000402667 FOXN2P32314 431 aa17.69■□□□□ 0.42
DNMT3A-205ENST00000402667 IL9RQ01113 521 aa17.69■□□□□ 0.42
DNMT3A-205ENST00000402667 HIC1Q14526 733 aa17.69■□□□□ 0.42
DNMT3A-205ENST00000402667 BBS9Q3SYG4 887 aa17.69■□□□□ 0.42
DNMT3A-205ENST00000402667 PDIK1LQ8N165 341 aa17.69■□□□□ 0.42
DNMT3A-205ENST00000402667 PLD5Q8N7P1 536 aa17.69■□□□□ 0.42
DNMT3A-205ENST00000402667 DENND1AQ8TEH3 1009 aa17.69■□□□□ 0.42
DNMT3A-205ENST00000402667 STK32AQ8WU08 396 aa17.69■□□□□ 0.42
DNMT3A-205ENST00000402667 ADAM33Q9BZ11 813 aa17.69■□□□□ 0.42
DNMT3A-205ENST00000402667 SENP1Q9P0U3 644 aa17.69■□□□□ 0.42
DNMT3A-205ENST00000402667 GNEQ9Y223 722 aaKnown RBP17.69■□□□□ 0.42
DNMT3A-205ENST00000402667 A8MXQ7 604 aa17.68■□□□□ 0.42
DNMT3A-205ENST00000402667 H7C0C1 242 aa17.68■□□□□ 0.42
DNMT3A-205ENST00000402667 ASMTLO95671 621 aa17.68■□□□□ 0.42
DNMT3A-205ENST00000402667 TAC1P20366 129 aa17.68■□□□□ 0.42
DNMT3A-205ENST00000402667 HNRNPH1P31943 449 aaKnown RBP17.68■□□□□ 0.42
DNMT3A-205ENST00000402667 ATP5OP48047 213 aa17.68■□□□□ 0.42
DNMT3A-205ENST00000402667 SLC18A1P54219 525 aa17.68■□□□□ 0.42
DNMT3A-205ENST00000402667 PCBP1Q15365 356 aaKnown RBP eCLIP17.68■□□□□ 0.42
DNMT3A-205ENST00000402667 ZKSCAN8Q15776 578 aaPredicted RBP17.68■□□□□ 0.42
DNMT3A-205ENST00000402667 SPRYD7Q5W111 196 aa17.68■□□□□ 0.42
DNMT3A-205ENST00000402667 ARHGAP17Q68EM7 881 aa17.68■□□□□ 0.42
DNMT3A-205ENST00000402667 C4orf33Q8N1A6 199 aa17.68■□□□□ 0.42
DNMT3A-205ENST00000402667 PQLC3Q8N755 202 aa17.68■□□□□ 0.42
DNMT3A-205ENST00000402667 C7orf31Q8N865 590 aa17.68■□□□□ 0.42
DNMT3A-205ENST00000402667 TEKT4Q8WW24 435 aa17.68■□□□□ 0.42
DNMT3A-205ENST00000402667 SMC6Q96SB8 1091 aa17.68■□□□□ 0.42
DNMT3A-205ENST00000402667 USP29Q9HBJ7 922 aa17.68■□□□□ 0.42
DNMT3A-205ENST00000402667 PCDH18Q9HCL0 1135 aa17.68■□□□□ 0.42
DNMT3A-205ENST00000402667 FETUBQ9UGM5 382 aa17.68■□□□□ 0.42
DNMT3A-205ENST00000402667 UBQLN1Q9UMX0 589 aaKnown RBP17.68■□□□□ 0.42
DNMT3A-205ENST00000402667 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.67■□□□□ 0.42
DNMT3A-205ENST00000402667 A0A1W2PPM1 405 aa17.67■□□□□ 0.42
DNMT3A-205ENST00000402667 RNASELQ05823 741 aaKnown RBP17.67■□□□□ 0.42
DNMT3A-205ENST00000402667 EFTUD2Q15029 972 aaKnown RBP eCLIP17.67■□□□□ 0.424e-7■■■■■ 27.4
DNMT3A-205ENST00000402667 CA9Q16790 459 aa17.67■□□□□ 0.42
DNMT3A-205ENST00000402667 PALM2Q8IXS6 379 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms