RNA–Protein interactions for RNA: ENST00000402434.6

RTN4-207, Transcript of reticulon 4, humanhuman

TSL 5 BASIC

Gene RTN4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-207ENST00000402434 YAF2Q8IY57 180 aa20.26■□□□□ 0.83
RTN4-207ENST00000402434 SHC3Q92529 594 aa20.26■□□□□ 0.83
RTN4-207ENST00000402434 GMIPQ9P107 970 aa20.26■□□□□ 0.83
RTN4-207ENST00000402434 HESX1Q9UBX0 185 aa20.26■□□□□ 0.83
RTN4-207ENST00000402434 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.26■□□□□ 0.832e-6■□□□□ 10
RTN4-207ENST00000402434 BECN2A8MW95 431 aa20.25■□□□□ 0.83
RTN4-207ENST00000402434 XPO1O14980 1071 aaKnown RBP20.25■□□□□ 0.83
RTN4-207ENST00000402434 PGFP49763 221 aa20.25■□□□□ 0.83
RTN4-207ENST00000402434 PLCB2Q00722 1185 aa20.25■□□□□ 0.83
RTN4-207ENST00000402434 PRKCQQ04759 706 aa20.25■□□□□ 0.83
RTN4-207ENST00000402434 PDE4CQ08493 712 aa20.25■□□□□ 0.83
RTN4-207ENST00000402434 BST2Q10589 180 aaKnown RBP20.25■□□□□ 0.83
RTN4-207ENST00000402434 MLF2Q15773 248 aaPredicted RBP20.25■□□□□ 0.83
RTN4-207ENST00000402434 SKOR2Q2VWA4 1001 aaPredicted RBP20.25■□□□□ 0.83
RTN4-207ENST00000402434 CCDC186Q7Z3E2 898 aa20.25■□□□□ 0.83
RTN4-207ENST00000402434 AOPEPQ8N6M6 819 aa20.25■□□□□ 0.83
RTN4-207ENST00000402434 RIN3Q8TB24 985 aa20.25■□□□□ 0.83
RTN4-207ENST00000402434 SHDQ96IW2 340 aa20.25■□□□□ 0.83
RTN4-207ENST00000402434 DDX23Q9BUQ8 820 aaKnown RBP20.25■□□□□ 0.83
RTN4-207ENST00000402434 MFSD1Q9H3U5 465 aa20.25■□□□□ 0.83
RTN4-207ENST00000402434 TLR8Q9NR97 1041 aaKnown RBP20.25■□□□□ 0.83
RTN4-207ENST00000402434 THG1LQ9NWX6 298 aaKnown RBP20.25■□□□□ 0.83
RTN4-207ENST00000402434 LIMA1Q9UHB6 759 aaKnown RBP20.25■□□□□ 0.83
RTN4-207ENST00000402434 PES1O00541 588 aaKnown RBP20.24■□□□□ 0.83
RTN4-207ENST00000402434 SETSIPP0DME0 302 aa20.24■□□□□ 0.83
RTN4-207ENST00000402434 KRT5P13647 590 aa20.24■□□□□ 0.83
RTN4-207ENST00000402434 CLCN5P51795 746 aa20.24■□□□□ 0.83
RTN4-207ENST00000402434 ZXDBP98169 803 aa20.24■□□□□ 0.83
RTN4-207ENST00000402434 HECTD3Q5T447 861 aa20.24■□□□□ 0.83
RTN4-207ENST00000402434 SUGP1Q8IWZ8 645 aaKnown RBP20.24■□□□□ 0.83
RTN4-207ENST00000402434 FAM83CQ9BQN1 747 aa20.24■□□□□ 0.83
RTN4-207ENST00000402434 VPS16Q9H269 839 aa20.24■□□□□ 0.83
RTN4-207ENST00000402434 HEBP1Q9NRV9 189 aa20.24■□□□□ 0.83
RTN4-207ENST00000402434 DNAJC12Q9UKB3 198 aa20.24■□□□□ 0.83
RTN4-207ENST00000402434 SYCE3A1L190 88 aa20.24■□□□□ 0.83
RTN4-207ENST00000402434 TULP2O00295 520 aa20.24■□□□□ 0.83
RTN4-207ENST00000402434 CYP26A1O43174 497 aa20.24■□□□□ 0.83
RTN4-207ENST00000402434 COCHO43405 550 aa20.24■□□□□ 0.83
RTN4-207ENST00000402434 CALCAP01258 141 aa20.24■□□□□ 0.83
RTN4-207ENST00000402434 BRD2P25440 801 aaKnown RBP20.24■□□□□ 0.83
RTN4-207ENST00000402434 PLA2G4AP47712 749 aa20.24■□□□□ 0.83
RTN4-207ENST00000402434 ZNF165P49910 485 aa20.24■□□□□ 0.83
RTN4-207ENST00000402434 MLLT6P55198 1093 aaPredicted RBP20.24■□□□□ 0.83
RTN4-207ENST00000402434 USP4Q13107 963 aa20.24■□□□□ 0.83
RTN4-207ENST00000402434 ZNF77Q15935 545 aa20.24■□□□□ 0.83
RTN4-207ENST00000402434 ARHGAP44Q17R89 818 aa20.24■□□□□ 0.83
RTN4-207ENST00000402434 KLHDC7AQ5VTJ3 777 aa20.24■□□□□ 0.83
RTN4-207ENST00000402434 CWF19L1Q69YN2 538 aaKnown RBP20.24■□□□□ 0.83
RTN4-207ENST00000402434 DHX40Q8IX18 779 aaKnown RBP20.24■□□□□ 0.83
RTN4-207ENST00000402434 KIAA1958Q8N8K9 716 aa20.24■□□□□ 0.83
RTN4-207ENST00000402434 UBA3Q8TBC4 463 aa20.24■□□□□ 0.83
RTN4-207ENST00000402434 SLC35F5Q8WV83 523 aa20.24■□□□□ 0.83
RTN4-207ENST00000402434 KCTD13Q8WZ19 329 aa20.24■□□□□ 0.83
RTN4-207ENST00000402434 TBC1D17Q9HA65 648 aa20.24■□□□□ 0.83
RTN4-207ENST00000402434 CYLDQ9NQC7 956 aa20.24■□□□□ 0.83
RTN4-207ENST00000402434 GKN1Q9NS71 199 aa20.24■□□□□ 0.83
RTN4-207ENST00000402434 AJAP1Q9UKB5 411 aaPredicted RBP20.24■□□□□ 0.83
RTN4-207ENST00000402434 SHISA7A6NL88 538 aa20.23■□□□□ 0.83
RTN4-207ENST00000402434 TPM2P07951 284 aa20.23■□□□□ 0.83
RTN4-207ENST00000402434 GLULP15104 373 aa20.23■□□□□ 0.83
RTN4-207ENST00000402434 COPB1P53618 953 aaKnown RBP20.23■□□□□ 0.83
RTN4-207ENST00000402434 MEA1Q16626 185 aa20.23■□□□□ 0.83
RTN4-207ENST00000402434 PM20D1Q6GTS8 502 aa20.23■□□□□ 0.83
RTN4-207ENST00000402434 ASTLQ6HA08 431 aaPredicted RBP20.23■□□□□ 0.83
RTN4-207ENST00000402434 APTXQ7Z2E3 356 aaKnown RBP20.23■□□□□ 0.83
RTN4-207ENST00000402434 ZNF276Q8N554 614 aa20.23■□□□□ 0.83
RTN4-207ENST00000402434 ANKRD20A12PQ8NF67 263 aa20.23■□□□□ 0.83
RTN4-207ENST00000402434 FLCNQ8NFG4 579 aa20.23■□□□□ 0.83
RTN4-207ENST00000402434 SH3RF2Q8TEC5 729 aa20.23■□□□□ 0.83
RTN4-207ENST00000402434 ZFYVE19Q96K21 471 aa20.23■□□□□ 0.83
RTN4-207ENST00000402434 CCSER2Q9H7U1 834 aa20.23■□□□□ 0.83
RTN4-207ENST00000402434 NMUR1Q9HB89 426 aa20.23■□□□□ 0.83
RTN4-207ENST00000402434 PLCB1Q9NQ66 1216 aa20.23■□□□□ 0.83
RTN4-207ENST00000402434 OSER1Q9NX31 292 aa20.23■□□□□ 0.83
RTN4-207ENST00000402434 KIF26AQ9ULI4 1882 aaPredicted RBP20.23■□□□□ 0.83
RTN4-207ENST00000402434 COL4A2P08572 1712 aa20.22■□□□□ 0.83
RTN4-207ENST00000402434 SMTNL1A8MU46 457 aa20.22■□□□□ 0.83
RTN4-207ENST00000402434 AOC1P19801 751 aa20.22■□□□□ 0.83
RTN4-207ENST00000402434 CDK11BP21127 795 aaKnown RBP20.22■□□□□ 0.83
RTN4-207ENST00000402434 RFX1P22670 979 aa20.22■□□□□ 0.83
RTN4-207ENST00000402434 AVPR2P30518 371 aa20.22■□□□□ 0.83
RTN4-207ENST00000402434 PSEN1P49768 467 aa20.22■□□□□ 0.83
RTN4-207ENST00000402434 TKTL1P51854 596 aa20.22■□□□□ 0.83
RTN4-207ENST00000402434 MTF1Q14872 753 aa20.22■□□□□ 0.83
RTN4-207ENST00000402434 SCD5Q86SK9 330 aa20.22■□□□□ 0.83
RTN4-207ENST00000402434 ZNF606Q8WXB4 792 aa20.22■□□□□ 0.83
RTN4-207ENST00000402434 NAA15Q9BXJ9 866 aaKnown RBP20.22■□□□□ 0.83
RTN4-207ENST00000402434 ACP6Q9NPH0 428 aa20.22■□□□□ 0.83
RTN4-207ENST00000402434 CLIC5Q9NZA1 410 aa20.22■□□□□ 0.83
RTN4-207ENST00000402434 LEFTY2O00292 366 aa20.21■□□□□ 0.83
RTN4-207ENST00000402434 FOXN3O00409 490 aaPredicted RBP20.21■□□□□ 0.83
RTN4-207ENST00000402434 TLR5O60602 858 aa20.21■□□□□ 0.83
RTN4-207ENST00000402434 ZBED1O96006 694 aa20.21■□□□□ 0.83
RTN4-207ENST00000402434 UCHL3P15374 230 aa20.21■□□□□ 0.83
RTN4-207ENST00000402434 IQCB1Q15051 598 aa20.21■□□□□ 0.83
RTN4-207ENST00000402434 FKBP15Q5T1M5 1219 aa20.21■□□□□ 0.83
RTN4-207ENST00000402434 PMF1Q6P1K2 205 aa20.21■□□□□ 0.83
RTN4-207ENST00000402434 KLHDC10Q6PID8 442 aa20.21■□□□□ 0.83
RTN4-207ENST00000402434 FAM71AQ8IYT1 594 aa20.21■□□□□ 0.83
RTN4-207ENST00000402434 ZFRQ96KR1 1074 aaKnown RBP20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms