RNA–Protein interactions for RNA: ENST00000402105.7

HPS4-203, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best) BASIC

Gene HPS4, Length 3,562 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-203ENST00000402105 ADPGKQ9BRR6 497 aa9.55□□□□□ -0.88
HPS4-203ENST00000402105 TUBB6Q9BUF5 446 aa9.55□□□□□ -0.88
HPS4-203ENST00000402105 ASCC2Q9H1I8 757 aaPredicted RBP9.55□□□□□ -0.88
HPS4-203ENST00000402105 EBF3Q9H4W6 596 aa9.55□□□□□ -0.88
HPS4-203ENST00000402105 RPAP3Q9H6T3 665 aaPredicted RBP9.55□□□□□ -0.88
HPS4-203ENST00000402105 MAN1C1Q9NR34 630 aa9.55□□□□□ -0.88
HPS4-203ENST00000402105 RNF19AQ9NV58 838 aa9.55□□□□□ -0.88
HPS4-203ENST00000402105 CLIC5Q9NZA1 410 aa9.55□□□□□ -0.88
HPS4-203ENST00000402105 SEPT10Q9P0V9 454 aa9.55□□□□□ -0.88
HPS4-203ENST00000402105 ZNF536O15090 1300 aa9.55□□□□□ -0.88
HPS4-203ENST00000402105 MAST2Q6P0Q8 1798 aa9.55□□□□□ -0.88
HPS4-203ENST00000402105 INO80B-WBP1J3KQ70 363 aa9.55□□□□□ -0.88
HPS4-203ENST00000402105 DGKIO75912 1065 aa9.55□□□□□ -0.88
HPS4-203ENST00000402105 PROCP04070 461 aa9.55□□□□□ -0.88
HPS4-203ENST00000402105 ITGAVP06756 1048 aa9.55□□□□□ -0.88
HPS4-203ENST00000402105 LYNP07948 512 aa9.55□□□□□ -0.88
HPS4-203ENST00000402105 ASNSP08243 561 aa9.55□□□□□ -0.88
HPS4-203ENST00000402105 GARTP22102 1010 aa9.55□□□□□ -0.88
HPS4-203ENST00000402105 TBXAS1P24557 533 aaPredicted RBP9.55□□□□□ -0.88
HPS4-203ENST00000402105 ABCG1P45844 678 aa9.55□□□□□ -0.88
HPS4-203ENST00000402105 CCNG1P51959 295 aa9.55□□□□□ -0.88
HPS4-203ENST00000402105 SESN2P58004 480 aaPredicted RBP9.55□□□□□ -0.88
HPS4-203ENST00000402105 PDE1BQ01064 536 aa9.55□□□□□ -0.88
HPS4-203ENST00000402105 MCL1Q07820 350 aa9.55□□□□□ -0.88
HPS4-203ENST00000402105 STX3Q13277 289 aa9.55□□□□□ -0.88
HPS4-203ENST00000402105 HIC1Q14526 733 aa9.55□□□□□ -0.88
HPS4-203ENST00000402105 FOXB2Q5VYV0 432 aa9.55□□□□□ -0.88
HPS4-203ENST00000402105 CES3Q6UWW8 571 aa9.55□□□□□ -0.88
HPS4-203ENST00000402105 RAPH1Q70E73 1250 aa9.55□□□□□ -0.88
HPS4-203ENST00000402105 TDRPQ86YL5 185 aa9.55□□□□□ -0.88
HPS4-203ENST00000402105 KIAA0319LQ8IZA0 1049 aa9.55□□□□□ -0.88
HPS4-203ENST00000402105 PANX3Q96QZ0 392 aa9.55□□□□□ -0.88
HPS4-203ENST00000402105 INO80BQ9C086 356 aaPredicted RBP9.55□□□□□ -0.88
HPS4-203ENST00000402105 DDX56Q9NY93 547 aaKnown RBP9.55□□□□□ -0.88
HPS4-203ENST00000402105 SLC7A8Q9UHI5 535 aa9.55□□□□□ -0.88
HPS4-203ENST00000402105 SPDYE2BA6NHP3 402 aa9.54□□□□□ -0.88
HPS4-203ENST00000402105 M0QYV0 167 aa9.54□□□□□ -0.88
HPS4-203ENST00000402105 SPDYE6P0CI01 402 aa9.54□□□□□ -0.88
HPS4-203ENST00000402105 HSD17B4P51659 736 aa9.54□□□□□ -0.88
HPS4-203ENST00000402105 CUL3Q13618 768 aa9.54□□□□□ -0.88
HPS4-203ENST00000402105 PTPN20Q4JDL3 420 aa9.54□□□□□ -0.88
HPS4-203ENST00000402105 LGSNQ5TDP6 509 aa9.54□□□□□ -0.88
HPS4-203ENST00000402105 TRMT10BQ6PF06 316 aaKnown RBP9.54□□□□□ -0.88
HPS4-203ENST00000402105 SDCCAG8Q86SQ7 713 aaPredicted RBP9.54□□□□□ -0.88
HPS4-203ENST00000402105 TMPRSS6Q8IU80 811 aa9.54□□□□□ -0.88
HPS4-203ENST00000402105 NAT8LQ8N9F0 302 aa9.54□□□□□ -0.88
HPS4-203ENST00000402105 PHACTR1Q9C0D0 580 aa9.54□□□□□ -0.88
HPS4-203ENST00000402105 MIS12Q9H081 205 aa9.54□□□□□ -0.88
HPS4-203ENST00000402105 WDR35Q9P2L0 1181 aa9.54□□□□□ -0.88
HPS4-203ENST00000402105 STX18Q9P2W9 335 aaKnown RBP9.54□□□□□ -0.88
HPS4-203ENST00000402105 PPP1R1BQ9UD71 204 aaPredicted RBP9.54□□□□□ -0.88
HPS4-203ENST00000402105 GINS2Q9Y248 185 aa9.54□□□□□ -0.88
HPS4-203ENST00000402105 DNAJC16Q9Y2G8 782 aa9.54□□□□□ -0.88
HPS4-203ENST00000402105 SNCAIPQ9Y6H5 919 aa9.54□□□□□ -0.88
HPS4-203ENST00000402105 ABCA3Q99758 1704 aa9.54□□□□□ -0.88
HPS4-203ENST00000402105 YDJCA8MPS7 323 aa9.54□□□□□ -0.88
HPS4-203ENST00000402105 NEMP1O14524 444 aa9.54□□□□□ -0.88
HPS4-203ENST00000402105 KRT7P08729 469 aa9.54□□□□□ -0.88
HPS4-203ENST00000402105 SNRPAP09012 282 aaKnown RBP9.54□□□□□ -0.88
HPS4-203ENST00000402105 RBL1P28749 1068 aa9.54□□□□□ -0.88
HPS4-203ENST00000402105 POLR2BP30876 1174 aaKnown RBP9.54□□□□□ -0.88
HPS4-203ENST00000402105 RTP1P59025 263 aa9.54□□□□□ -0.88
HPS4-203ENST00000402105 IGBP1P78318 339 aa9.54□□□□□ -0.88
HPS4-203ENST00000402105 PRKD1Q15139 912 aaPredicted RBP9.54□□□□□ -0.88
HPS4-203ENST00000402105 MMEL1Q495T6 779 aa9.54□□□□□ -0.88
HPS4-203ENST00000402105 ATG16L1Q676U5 607 aa9.54□□□□□ -0.88
HPS4-203ENST00000402105 CIAPIN1Q6FI81 312 aa9.54□□□□□ -0.88
HPS4-203ENST00000402105 PGBD4Q96DM1 585 aa9.54□□□□□ -0.88
HPS4-203ENST00000402105 MOCOSQ96EN8 888 aa9.54□□□□□ -0.88
HPS4-203ENST00000402105 PGLYRP2Q96PD5 576 aa9.54□□□□□ -0.88
HPS4-203ENST00000402105 WWP1Q9H0M0 922 aa9.54□□□□□ -0.88
HPS4-203ENST00000402105 LNPEPQ9UIQ6 1025 aa9.54□□□□□ -0.88
HPS4-203ENST00000402105 DRG1Q9Y295 367 aaKnown RBP9.54□□□□□ -0.88
HPS4-203ENST00000402105 A6NJR5 290 aa9.54□□□□□ -0.88
HPS4-203ENST00000402105 RGL2O15211 777 aa9.54□□□□□ -0.88
HPS4-203ENST00000402105 ZC3H11AO75152 810 aaKnown RBP eCLIP9.54□□□□□ -0.88
HPS4-203ENST00000402105 NPTXRO95502 500 aa9.54□□□□□ -0.88
HPS4-203ENST00000402105 RARBP10826 455 aa9.54□□□□□ -0.88
HPS4-203ENST00000402105 PDGFRAP16234 1089 aa9.54□□□□□ -0.88
HPS4-203ENST00000402105 TCN1P20061 433 aaPredicted RBP9.54□□□□□ -0.88
HPS4-203ENST00000402105 CCND2P30279 289 aa9.54□□□□□ -0.88
HPS4-203ENST00000402105 CCNFP41002 786 aa9.54□□□□□ -0.88
HPS4-203ENST00000402105 GRIA1P42261 906 aa9.54□□□□□ -0.88
HPS4-203ENST00000402105 DEUP1Q05D60 604 aa9.54□□□□□ -0.88
HPS4-203ENST00000402105 WDR78Q5VTH9 848 aa9.54□□□□□ -0.88
HPS4-203ENST00000402105 OR52E8Q6IFG1 317 aa9.54□□□□□ -0.88
HPS4-203ENST00000402105 FAM151AQ8WW52 585 aa9.54□□□□□ -0.88
HPS4-203ENST00000402105 ALKBH8Q96BT7 664 aaKnown RBP9.54□□□□□ -0.88
HPS4-203ENST00000402105 GCNAQ96QF7 691 aa9.54□□□□□ -0.88
HPS4-203ENST00000402105 CPXM1Q96SM3 734 aa9.54□□□□□ -0.88
HPS4-203ENST00000402105 CYLDQ9NQC7 956 aa9.54□□□□□ -0.88
HPS4-203ENST00000402105 USP18Q9UMW8 372 aa9.54□□□□□ -0.88
HPS4-203ENST00000402105 GOLGA8QA0A0J9YX86 632 aa9.53□□□□□ -0.88
HPS4-203ENST00000402105 GOLGA8OA6NCC3 632 aa9.53□□□□□ -0.88
HPS4-203ENST00000402105 GOLGA8NF8WBI6 632 aa9.53□□□□□ -0.88
HPS4-203ENST00000402105 PRPSAP2O60256 369 aa9.53□□□□□ -0.88
HPS4-203ENST00000402105 OSBPP22059 807 aa9.53□□□□□ -0.88
HPS4-203ENST00000402105 INHBEP58166 350 aa9.53□□□□□ -0.88
HPS4-203ENST00000402105 PTP4A2Q12974 167 aa9.53□□□□□ -0.88
HPS4-203ENST00000402105 ZC3H12AQ5D1E8 599 aaKnown RBP9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms