RNA–Protein interactions for RNA: ENST00000400771.7

ATG4B-202, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 663 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-202ENST00000400771 MRPS17Q9Y2R5 130 aaKnown RBP16.35■□□□□ 0.21
ATG4B-202ENST00000400771 WNT6Q9Y6F9 365 aa16.35■□□□□ 0.21
ATG4B-202ENST00000400771 EP300Q09472 2414 aaPredicted RBP16.35■□□□□ 0.21
ATG4B-202ENST00000400771 TDGF1P13385 188 aa16.34■□□□□ 0.21
ATG4B-202ENST00000400771 HDCP19113 662 aa16.34■□□□□ 0.21
ATG4B-202ENST00000400771 KPNA1P52294 538 aaPredicted RBP16.34■□□□□ 0.21
ATG4B-202ENST00000400771 RUNX3Q13761 415 aa16.34■□□□□ 0.21
ATG4B-202ENST00000400771 CCINQ13939 588 aa16.34■□□□□ 0.21
ATG4B-202ENST00000400771 GAB4Q2WGN9 574 aa16.34■□□□□ 0.21
ATG4B-202ENST00000400771 IRF2BP1Q8IU81 584 aa16.34■□□□□ 0.21
ATG4B-202ENST00000400771 PDZD8Q8NEN9 1154 aa16.34■□□□□ 0.21
ATG4B-202ENST00000400771 OSCP1Q8WVF1 389 aa16.34■□□□□ 0.21
ATG4B-202ENST00000400771 KAT5Q92993 513 aa16.34■□□□□ 0.21
ATG4B-202ENST00000400771 NELL2Q99435 816 aa16.34■□□□□ 0.21
ATG4B-202ENST00000400771 IRF2BPLQ9H1B7 796 aa16.34■□□□□ 0.21
ATG4B-202ENST00000400771 CCSER2Q9H7U1 834 aa16.34■□□□□ 0.21
ATG4B-202ENST00000400771 RBM12Q9NTZ6 932 aaKnown RBP16.34■□□□□ 0.21
ATG4B-202ENST00000400771 THG1LQ9NWX6 298 aaKnown RBP16.34■□□□□ 0.21
ATG4B-202ENST00000400771 OSER1Q9NX31 292 aa16.34■□□□□ 0.21
ATG4B-202ENST00000400771 RWDD2AQ9UIY3 292 aa16.34■□□□□ 0.21
ATG4B-202ENST00000400771 CPQQ9Y646 472 aa16.34■□□□□ 0.21
ATG4B-202ENST00000400771 MYO18AQ92614 2054 aaKnown RBP16.34■□□□□ 0.21
ATG4B-202ENST00000400771 LEFTY2O00292 366 aa16.33■□□□□ 0.2
ATG4B-202ENST00000400771 CYP26A1O43174 497 aa16.33■□□□□ 0.2
ATG4B-202ENST00000400771 COCHO43405 550 aa16.33■□□□□ 0.2
ATG4B-202ENST00000400771 SP9P0CG40 484 aa16.33■□□□□ 0.2
ATG4B-202ENST00000400771 ACO1P21399 889 aaKnown RBP16.33■□□□□ 0.2
ATG4B-202ENST00000400771 TUBP50607 506 aa16.33■□□□□ 0.2
ATG4B-202ENST00000400771 PDE6CP51160 858 aa16.33■□□□□ 0.2
ATG4B-202ENST00000400771 LRMPQ12912 555 aa16.33■□□□□ 0.2
ATG4B-202ENST00000400771 MTAPQ13126 283 aa16.33■□□□□ 0.2
ATG4B-202ENST00000400771 PON2Q15165 354 aa16.33■□□□□ 0.2
ATG4B-202ENST00000400771 PDGFRLQ15198 375 aa16.33■□□□□ 0.2
ATG4B-202ENST00000400771 DPCR1Q3MIW9 517 aa16.33■□□□□ 0.2
ATG4B-202ENST00000400771 ARHGAP17Q68EM7 881 aa16.33■□□□□ 0.2
ATG4B-202ENST00000400771 Q6ZS52 159 aa16.33■□□□□ 0.2
ATG4B-202ENST00000400771 ALYREFQ86V81 257 aaKnown RBP16.33■□□□□ 0.2
ATG4B-202ENST00000400771 TTC30AQ86WT1 665 aa16.33■□□□□ 0.2
ATG4B-202ENST00000400771 ARHGEF19Q8IW93 802 aa16.33■□□□□ 0.2
ATG4B-202ENST00000400771 TTC39CQ8N584 583 aa16.33■□□□□ 0.2
ATG4B-202ENST00000400771 JAKMIP2Q96AA8 810 aa16.33■□□□□ 0.2
ATG4B-202ENST00000400771 TMEM176AQ96HP8 235 aa16.33■□□□□ 0.2
ATG4B-202ENST00000400771 SRRTQ9BXP5 876 aaKnown RBP16.33■□□□□ 0.2
ATG4B-202ENST00000400771 COMMD8Q9NX08 183 aa16.33■□□□□ 0.2
ATG4B-202ENST00000400771 P4HA2O15460 535 aa16.32■□□□□ 0.2
ATG4B-202ENST00000400771 KCNH2Q12809 1159 aa16.32■□□□□ 0.2
ATG4B-202ENST00000400771 C1orf228Q6PIY5 440 aa16.32■□□□□ 0.2
ATG4B-202ENST00000400771 EZH1Q92800 747 aaPredicted RBP16.32■□□□□ 0.2
ATG4B-202ENST00000400771 NELL1Q92832 810 aa16.32■□□□□ 0.2
ATG4B-202ENST00000400771 WBP2Q969T9 261 aa16.32■□□□□ 0.2
ATG4B-202ENST00000400771 CNOT6LQ96LI5 555 aaKnown RBP16.32■□□□□ 0.2
ATG4B-202ENST00000400771 DUSP16Q9BY84 665 aa16.32■□□□□ 0.2
ATG4B-202ENST00000400771 SPTBN4Q9H254 2564 aa16.32■□□□□ 0.2
ATG4B-202ENST00000400771 ECT2Q9H8V3 914 aa16.32■□□□□ 0.2
ATG4B-202ENST00000400771 NMUR1Q9HB89 426 aa16.32■□□□□ 0.2
ATG4B-202ENST00000400771 SPATA6Q9NWH7 488 aaPredicted RBP16.32■□□□□ 0.2
ATG4B-202ENST00000400771 SMPD4Q9NXE4 827 aa16.32■□□□□ 0.2
ATG4B-202ENST00000400771 TULP2O00295 520 aa16.31■□□□□ 0.2
ATG4B-202ENST00000400771 SCAMP3O14828 347 aaKnown RBP16.31■□□□□ 0.2
ATG4B-202ENST00000400771 GNA14O95837 355 aa16.31■□□□□ 0.2
ATG4B-202ENST00000400771 TBXAS1P24557 533 aaPredicted RBP16.31■□□□□ 0.2
ATG4B-202ENST00000400771 GJA4P35212 333 aa16.31■□□□□ 0.2
ATG4B-202ENST00000400771 KIF11P52732 1056 aa16.31■□□□□ 0.2
ATG4B-202ENST00000400771 TMEM196Q5HYL7 178 aa16.31■□□□□ 0.2
ATG4B-202ENST00000400771 FSTL4Q6MZW2 842 aa16.31■□□□□ 0.2
ATG4B-202ENST00000400771 BHLHA9Q7RTU4 235 aa16.31■□□□□ 0.2
ATG4B-202ENST00000400771 KIAA1958Q8N8K9 716 aa16.31■□□□□ 0.2
ATG4B-202ENST00000400771 GPT2Q8TD30 523 aa16.31■□□□□ 0.2
ATG4B-202ENST00000400771 KREMEN1Q96MU8 473 aa16.31■□□□□ 0.2
ATG4B-202ENST00000400771 NT5C1BQ96P26 610 aa16.31■□□□□ 0.2
ATG4B-202ENST00000400771 ZSWIM1Q9BR11 485 aa16.31■□□□□ 0.2
ATG4B-202ENST00000400771 IER2Q9BTL4 223 aa16.31■□□□□ 0.2
ATG4B-202ENST00000400771 NUP62CLQ9H1M0 184 aa16.31■□□□□ 0.2
ATG4B-202ENST00000400771 LINC00597Q9H2U6 94 aa16.31■□□□□ 0.2
ATG4B-202ENST00000400771 LMAN1LQ9HAT1 526 aa16.31■□□□□ 0.2
ATG4B-202ENST00000400771 CYLDQ9NQC7 956 aa16.31■□□□□ 0.2
ATG4B-202ENST00000400771 C2orf42Q9NWW7 574 aa16.31■□□□□ 0.2
ATG4B-202ENST00000400771 DUS2Q9NX74 493 aaKnown RBP16.31■□□□□ 0.2
ATG4B-202ENST00000400771 CHORDC1Q9UHD1 332 aaPredicted RBP16.31■□□□□ 0.2
ATG4B-202ENST00000400771 SCML2Q9UQR0 700 aa16.31■□□□□ 0.2
ATG4B-202ENST00000400771 USP3Q9Y6I4 520 aa16.31■□□□□ 0.2
ATG4B-202ENST00000400771 PRR23AA6NEV1 266 aa16.3■□□□□ 0.2
ATG4B-202ENST00000400771 O00370 1275 aa16.3■□□□□ 0.2
ATG4B-202ENST00000400771 TRDMT1O14717 391 aaKnown RBP16.3■□□□□ 0.2
ATG4B-202ENST00000400771 NCAM2O15394 837 aa16.3■□□□□ 0.2
ATG4B-202ENST00000400771 GREM1O60565 184 aa16.3■□□□□ 0.2
ATG4B-202ENST00000400771 ABL1P00519 1130 aa16.3■□□□□ 0.2
ATG4B-202ENST00000400771 AFPP02771 609 aaKnown RBP16.3■□□□□ 0.2
ATG4B-202ENST00000400771 CYP17A1P05093 508 aa16.3■□□□□ 0.2
ATG4B-202ENST00000400771 MBL2P11226 248 aaPredicted RBP16.3■□□□□ 0.2
ATG4B-202ENST00000400771 IFNAR2P48551 515 aa16.3■□□□□ 0.2
ATG4B-202ENST00000400771 ZNF132P52740 706 aa16.3■□□□□ 0.2
ATG4B-202ENST00000400771 GOLGA7BQ2TAP0 167 aa16.3■□□□□ 0.2
ATG4B-202ENST00000400771 PKDCCQ504Y2 493 aa16.3■□□□□ 0.2
ATG4B-202ENST00000400771 RAB41Q5JT25 222 aa16.3■□□□□ 0.2
ATG4B-202ENST00000400771 HECTD3Q5T447 861 aa16.3■□□□□ 0.2
ATG4B-202ENST00000400771 CC2D1AQ6P1N0 951 aaPredicted RBP16.3■□□□□ 0.2
ATG4B-202ENST00000400771 PKN3Q6P5Z2 889 aa16.3■□□□□ 0.2
ATG4B-202ENST00000400771 MAMSTRQ6ZN01 415 aa16.3■□□□□ 0.2
ATG4B-202ENST00000400771 ASCL5Q7RTU5 278 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms