RNA–Protein interactions for RNA: ENST00000399982.6

CHD8-201, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD8, Length 8,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-201ENST00000399982 MYO10Q9HD67 2058 aa8.65□□□□□ -1.03
CHD8-201ENST00000399982 USP42Q9H9J4 1324 aaKnown RBP8.65□□□□□ -1.03
CHD8-201ENST00000399982 PLB1Q6P1J6 1458 aa8.65□□□□□ -1.03
CHD8-201ENST00000399982 LARGE1O95461 756 aa8.65□□□□□ -1.03
CHD8-201ENST00000399982 GYPCP04921 128 aa8.65□□□□□ -1.03
CHD8-201ENST00000399982 RFC5P40937 340 aa8.65□□□□□ -1.03
CHD8-201ENST00000399982 EIF3EP60228 445 aaKnown RBP8.65□□□□□ -1.03
CHD8-201ENST00000399982 EFHC2Q5JST6 749 aa8.65□□□□□ -1.03
CHD8-201ENST00000399982 ULK2Q8IYT8 1036 aa8.65□□□□□ -1.03
CHD8-201ENST00000399982 SLC35G2Q8TBE7 412 aa8.65□□□□□ -1.03
CHD8-201ENST00000399982 TEX13BQ9BXU2 312 aa8.65□□□□□ -1.03
CHD8-201ENST00000399982 NOL6Q9H6R4 1146 aaKnown RBP8.65□□□□□ -1.03
CHD8-201ENST00000399982 ALG13Q9NP73 1137 aaKnown RBP8.65□□□□□ -1.03
CHD8-201ENST00000399982 KCNK4Q9NYG8 393 aa8.65□□□□□ -1.03
CHD8-201ENST00000399982 SNX6Q9UNH7 406 aa8.65□□□□□ -1.03
CHD8-201ENST00000399982 ZBTB1Q9Y2K1 713 aa8.65□□□□□ -1.03
CHD8-201ENST00000399982 RAD54BQ9Y620 910 aa8.65□□□□□ -1.03
CHD8-201ENST00000399982 H3BQF6 201 aa8.65□□□□□ -1.03
CHD8-201ENST00000399982 ECDO95905 644 aaPredicted RBP8.65□□□□□ -1.03
CHD8-201ENST00000399982 CCNA2P20248 432 aa8.65□□□□□ -1.03
CHD8-201ENST00000399982 FDFT1P37268 417 aa8.65□□□□□ -1.03
CHD8-201ENST00000399982 CRKP46108 304 aa8.65□□□□□ -1.03
CHD8-201ENST00000399982 AP1S1P61966 158 aa8.65□□□□□ -1.03
CHD8-201ENST00000399982 PTK6Q13882 451 aa8.65□□□□□ -1.03
CHD8-201ENST00000399982 KCNT1Q5JUK3 1230 aa8.65□□□□□ -1.03
CHD8-201ENST00000399982 R3HCC1LQ7Z5L2 792 aaKnown RBP8.65□□□□□ -1.03
CHD8-201ENST00000399982 DCLK3Q9C098 648 aa8.65□□□□□ -1.03
CHD8-201ENST00000399982 PNPLA3Q9NST1 481 aa8.65□□□□□ -1.03
CHD8-201ENST00000399982 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.65□□□□□ -1.033e-7■■■□□ 17.5
CHD8-201ENST00000399982 HEATR9A2RTY3 570 aa8.64□□□□□ -1.03
CHD8-201ENST00000399982 POTEMA6NI47 508 aa8.64□□□□□ -1.03
CHD8-201ENST00000399982 LSM1O15116 133 aaKnown RBP8.64□□□□□ -1.03
CHD8-201ENST00000399982 UNC5CO95185 931 aa8.64□□□□□ -1.03
CHD8-201ENST00000399982 EPN2O95208 641 aa8.64□□□□□ -1.03
CHD8-201ENST00000399982 PSAPP07602 524 aa8.64□□□□□ -1.03
CHD8-201ENST00000399982 RALAP11233 206 aa8.64□□□□□ -1.03
CHD8-201ENST00000399982 ADSLP30566 484 aaPredicted RBP8.64□□□□□ -1.03
CHD8-201ENST00000399982 SLFN13Q68D06 897 aa8.64□□□□□ -1.03
CHD8-201ENST00000399982 POTEHQ6S545 545 aa8.64□□□□□ -1.03
CHD8-201ENST00000399982 POTEGQ6S5H5 508 aa8.64□□□□□ -1.03
CHD8-201ENST00000399982 LINC00523Q86TU6 105 aa8.64□□□□□ -1.03
CHD8-201ENST00000399982 AKAP14Q86UN6 197 aa8.64□□□□□ -1.03
CHD8-201ENST00000399982 CCDC185Q8N715 623 aa8.64□□□□□ -1.03
CHD8-201ENST00000399982 APEX2Q9UBZ4 518 aa8.64□□□□□ -1.03
CHD8-201ENST00000399982 PRR12Q9ULL5 1215 aa8.64□□□□□ -1.03
CHD8-201ENST00000399982 SIK3Q9Y2K2 1263 aa8.64□□□□□ -1.03
CHD8-201ENST00000399982 SPACA6W5XKT8 324 aa8.64□□□□□ -1.03
CHD8-201ENST00000399982 TNRQ92752 1358 aa8.64□□□□□ -1.03
CHD8-201ENST00000399982 HUS1O60921 280 aa8.64□□□□□ -1.03
CHD8-201ENST00000399982 NDUFS3O75489 264 aa8.64□□□□□ -1.03
CHD8-201ENST00000399982 NUDT14O95848 222 aa8.64□□□□□ -1.03
CHD8-201ENST00000399982 ALADP13716 330 aa8.64□□□□□ -1.03
CHD8-201ENST00000399982 LCP1P13796 627 aa8.64□□□□□ -1.03
CHD8-201ENST00000399982 OTUD4Q01804 1114 aaKnown RBP8.64□□□□□ -1.03
CHD8-201ENST00000399982 KCNMA1Q12791 1236 aa8.64□□□□□ -1.03
CHD8-201ENST00000399982 DDX39BQ13838 428 aaKnown RBP8.64□□□□□ -1.03
CHD8-201ENST00000399982 CHI3L2Q15782 390 aa8.64□□□□□ -1.03
CHD8-201ENST00000399982 ABCB5Q2M3G0 1257 aa8.64□□□□□ -1.03
CHD8-201ENST00000399982 PDXDC2PQ6P474 469 aa8.64□□□□□ -1.03
CHD8-201ENST00000399982 C3orf62Q6ZUJ4 267 aa8.64□□□□□ -1.03
CHD8-201ENST00000399982 ZNF589Q86UQ0 364 aaPredicted RBP8.64□□□□□ -1.03
CHD8-201ENST00000399982 CLVS1Q8IUQ0 354 aaPredicted RBP8.64□□□□□ -1.03
CHD8-201ENST00000399982 SCAIQ8N9R8 606 aa8.64□□□□□ -1.03
CHD8-201ENST00000399982 CASKIN2Q8WXE0 1202 aa8.64□□□□□ -1.03
CHD8-201ENST00000399982 RHOBTB2Q9BYZ6 727 aa8.64□□□□□ -1.03
CHD8-201ENST00000399982 CCNB1IP1Q9NPC3 277 aa8.64□□□□□ -1.03
CHD8-201ENST00000399982 PCP4L1A6NKN8 68 aa8.64□□□□□ -1.03
CHD8-201ENST00000399982 VPS4BO75351 444 aa8.64□□□□□ -1.03
CHD8-201ENST00000399982 ZNF23P17027 643 aa8.64□□□□□ -1.03
CHD8-201ENST00000399982 S100GP29377 79 aa8.64□□□□□ -1.03
CHD8-201ENST00000399982 CDK7P50613 346 aa8.64□□□□□ -1.03
CHD8-201ENST00000399982 TYSND1Q2T9J0 566 aa8.64□□□□□ -1.03
CHD8-201ENST00000399982 SAMD4BQ5PRF9 694 aaKnown RBP8.64□□□□□ -1.03
CHD8-201ENST00000399982 MFSD14BQ5SR56 506 aa8.64□□□□□ -1.03
CHD8-201ENST00000399982 OTOAQ7RTW8 1153 aa8.64□□□□□ -1.03
CHD8-201ENST00000399982 TATDN2Q93075 761 aa8.64□□□□□ -1.03
CHD8-201ENST00000399982 COX4I2Q96KJ9 171 aa8.64□□□□□ -1.03
CHD8-201ENST00000399982 LRMDAQ9H2I8 198 aa8.64□□□□□ -1.03
CHD8-201ENST00000399982 ERBB3P21860 1342 aa8.64□□□□□ -1.03
CHD8-201ENST00000399982 AGRPO00253 132 aa8.64□□□□□ -1.03
CHD8-201ENST00000399982 POU1F1P28069 291 aa8.64□□□□□ -1.03
CHD8-201ENST00000399982 STARP49675 285 aa8.64□□□□□ -1.03
CHD8-201ENST00000399982 CDC73Q6P1J9 531 aa8.64□□□□□ -1.03
CHD8-201ENST00000399982 SHC4Q6S5L8 630 aa8.64□□□□□ -1.03
CHD8-201ENST00000399982 CATSPER4Q7RTX7 472 aa8.64□□□□□ -1.03
CHD8-201ENST00000399982 UNC5CLQ8IV45 518 aa8.64□□□□□ -1.03
CHD8-201ENST00000399982 PM20D2Q8IYS1 436 aa8.64□□□□□ -1.03
CHD8-201ENST00000399982 NACC2Q96BF6 587 aa8.64□□□□□ -1.03
CHD8-201ENST00000399982 OSBPL11Q9BXB4 747 aa8.64□□□□□ -1.03
CHD8-201ENST00000399982 RMND5AQ9H871 391 aa8.64□□□□□ -1.03
CHD8-201ENST00000399982 ANKZF1Q9H8Y5 726 aa8.64□□□□□ -1.03
CHD8-201ENST00000399982 ELL3Q9HB65 397 aaPredicted RBP8.64□□□□□ -1.03
CHD8-201ENST00000399982 E2F8A0AVK6 867 aa8.64□□□□□ -1.03
CHD8-201ENST00000399982 CCDC162PA2VCL2 907 aa8.64□□□□□ -1.03
CHD8-201ENST00000399982 TCEA3O75764 348 aa8.64□□□□□ -1.03
CHD8-201ENST00000399982 RTN3O95197 1032 aaPredicted RBP8.64□□□□□ -1.03
CHD8-201ENST00000399982 PARNO95453 639 aaKnown RBP8.64□□□□□ -1.03
CHD8-201ENST00000399982 HLA-DQA2P01906 255 aa8.64□□□□□ -1.03
CHD8-201ENST00000399982 S100A6P06703 90 aa8.64□□□□□ -1.03
CHD8-201ENST00000399982 GPC1P35052 558 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms