RNA–Protein interactions for RNA: ENST00000399753.2

MSRB1-202, Transcript of methionine sulfoxide reductase B1, humanhuman

TSL 3 BASIC

Gene MSRB1, Length 847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB1-202ENST00000399753 PCNX2A6NKB5 2137 aa18.2■□□□□ 0.5
MSRB1-202ENST00000399753 TCRBV21S2A2A0A5A6 115 aa18.2■□□□□ 0.5
MSRB1-202ENST00000399753 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.2■□□□□ 0.5
MSRB1-202ENST00000399753 TACC1O75410 805 aa18.2■□□□□ 0.5
MSRB1-202ENST00000399753 MBL2P11226 248 aaPredicted RBP18.2■□□□□ 0.5
MSRB1-202ENST00000399753 HOXB3P14651 431 aaPredicted RBP18.2■□□□□ 0.5
MSRB1-202ENST00000399753 ITPKAP23677 461 aa18.2■□□□□ 0.5
MSRB1-202ENST00000399753 HOXD12P35452 270 aa18.2■□□□□ 0.5
MSRB1-202ENST00000399753 SEMA3BQ13214 749 aa18.2■□□□□ 0.5
MSRB1-202ENST00000399753 LY6G5CQ5SRR4 150 aa18.2■□□□□ 0.5
MSRB1-202ENST00000399753 PEAR1Q5VY43 1037 aaPredicted RBP18.2■□□□□ 0.5
MSRB1-202ENST00000399753 TRAPPC11Q7Z392 1133 aa18.2■□□□□ 0.5
MSRB1-202ENST00000399753 WDR49Q8IV35 697 aa18.2■□□□□ 0.5
MSRB1-202ENST00000399753 PGBD3Q8N328 593 aa18.2■□□□□ 0.5
MSRB1-202ENST00000399753 ZCCHC14Q8WYQ9 949 aaKnown RBP18.2■□□□□ 0.5
MSRB1-202ENST00000399753 ATXN2Q99700 1313 aaKnown RBP18.2■□□□□ 0.5
MSRB1-202ENST00000399753 DMXL2Q8TDJ6 3036 aa18.2■□□□□ 0.5
MSRB1-202ENST00000399753 E2F8A0AVK6 867 aa18.19■□□□□ 0.5
MSRB1-202ENST00000399753 VPS37CA5D8V6 355 aaPredicted RBP18.19■□□□□ 0.5
MSRB1-202ENST00000399753 UPK3BL1B0FP48 263 aa18.19■□□□□ 0.5
MSRB1-202ENST00000399753 UPK3BL2E5RIL1 263 aa18.19■□□□□ 0.5
MSRB1-202ENST00000399753 CST3P01034 146 aaPredicted RBP18.19■□□□□ 0.5
MSRB1-202ENST00000399753 CFIP05156 583 aa18.19■□□□□ 0.5
MSRB1-202ENST00000399753 FAM163BP0C2L3 166 aa18.19■□□□□ 0.5
MSRB1-202ENST00000399753 PTPN1P18031 435 aaKnown RBP18.19■□□□□ 0.5
MSRB1-202ENST00000399753 STAT6P42226 847 aa18.19■□□□□ 0.5
MSRB1-202ENST00000399753 GLIS3Q8NEA6 775 aa18.19■□□□□ 0.5
MSRB1-202ENST00000399753 OR6B3Q8NGW1 331 aa18.19■□□□□ 0.5
MSRB1-202ENST00000399753 PANK2Q9BZ23 570 aa18.19■□□□□ 0.5
MSRB1-202ENST00000399753 ZNF518BQ9C0D4 1074 aa18.19■□□□□ 0.5
MSRB1-202ENST00000399753 ELOVL4Q9GZR5 314 aa18.19■□□□□ 0.5
MSRB1-202ENST00000399753 HSPBP1Q9NZL4 362 aa18.19■□□□□ 0.5
MSRB1-202ENST00000399753 SLC6A14Q9UN76 642 aa18.19■□□□□ 0.5
MSRB1-202ENST00000399753 MSRB2Q9Y3D2 182 aa18.19■□□□□ 0.5
MSRB1-202ENST00000399753 PI4KAP42356 2102 aa18.19■□□□□ 0.5
MSRB1-202ENST00000399753 TNRC6BQ9UPQ9 1833 aaKnown RBP18.19■□□□□ 0.5
MSRB1-202ENST00000399753 MYOFQ9NZM1 2061 aa18.18■□□□□ 0.5
MSRB1-202ENST00000399753 A0A087X0B3 334 aa18.18■□□□□ 0.5
MSRB1-202ENST00000399753 SPAARA0A1B0GVQ0 90 aa18.18■□□□□ 0.5
MSRB1-202ENST00000399753 TBC1D3BA6NDS4 549 aa18.18■□□□□ 0.5
MSRB1-202ENST00000399753 YWHAQP27348 245 aa18.18■□□□□ 0.5
MSRB1-202ENST00000399753 SIM1P81133 766 aaPredicted RBP18.18■□□□□ 0.5
MSRB1-202ENST00000399753 GAD2Q05329 585 aa18.18■□□□□ 0.5
MSRB1-202ENST00000399753 IFRD2Q12894 506 aaPredicted RBP18.18■□□□□ 0.5
MSRB1-202ENST00000399753 DUOXA1Q1HG43 343 aa18.18■□□□□ 0.5
MSRB1-202ENST00000399753 STXBP4Q6ZWJ1 553 aa18.18■□□□□ 0.5
MSRB1-202ENST00000399753 ETFBKMTQ8IXQ9 262 aa18.18■□□□□ 0.5
MSRB1-202ENST00000399753 CCDC65Q8IXS2 484 aa18.18■□□□□ 0.5
MSRB1-202ENST00000399753 CEP76Q8TAP6 659 aa18.18■□□□□ 0.5
MSRB1-202ENST00000399753 KCNV2Q8TDN2 545 aa18.18■□□□□ 0.5
MSRB1-202ENST00000399753 OTUB2Q96DC9 234 aa18.18■□□□□ 0.5
MSRB1-202ENST00000399753 ZFRQ96KR1 1074 aaKnown RBP18.18■□□□□ 0.5
MSRB1-202ENST00000399753 DPEP3Q9H4B8 488 aa18.18■□□□□ 0.5
MSRB1-202ENST00000399753 KIAA1586Q9HCI6 787 aa18.18■□□□□ 0.5
MSRB1-202ENST00000399753 FSCN3Q9NQT6 498 aa18.18■□□□□ 0.5
MSRB1-202ENST00000399753 KLK13Q9UKR3 277 aa18.18■□□□□ 0.5
MSRB1-202ENST00000399753 CLDN5O00501 218 aa18.17■□□□□ 0.5
MSRB1-202ENST00000399753 HOXC11O43248 304 aaPredicted RBP18.17■□□□□ 0.5
MSRB1-202ENST00000399753 AP5Z1O43299 807 aa18.17■□□□□ 0.5
MSRB1-202ENST00000399753 COCHO43405 550 aa18.17■□□□□ 0.5
MSRB1-202ENST00000399753 HOXD13P35453 343 aa18.17■□□□□ 0.5
MSRB1-202ENST00000399753 ATXN3P54252 364 aaPredicted RBP18.17■□□□□ 0.5
MSRB1-202ENST00000399753 RPL6Q02878 288 aaKnown RBP18.17■□□□□ 0.5
MSRB1-202ENST00000399753 GFPT1Q06210 699 aaPredicted RBP18.17■□□□□ 0.5
MSRB1-202ENST00000399753 WDR72Q3MJ13 1102 aa18.17■□□□□ 0.5
MSRB1-202ENST00000399753 BTBD8Q5XKL5 378 aa18.17■□□□□ 0.5
MSRB1-202ENST00000399753 TRMT11Q7Z4G4 463 aaKnown RBP18.17■□□□□ 0.5
MSRB1-202ENST00000399753 NUP93Q8N1F7 819 aa18.17■□□□□ 0.5
MSRB1-202ENST00000399753 HDDC3Q8N4P3 179 aa18.17■□□□□ 0.5
MSRB1-202ENST00000399753 ZNF513Q8N8E2 541 aaPredicted RBP18.17■□□□□ 0.5
MSRB1-202ENST00000399753 NAT16Q8N8M0 369 aa18.17■□□□□ 0.5
MSRB1-202ENST00000399753 PDZD8Q8NEN9 1154 aa18.17■□□□□ 0.5
MSRB1-202ENST00000399753 OVCA2Q8WZ82 227 aa18.17■□□□□ 0.5
MSRB1-202ENST00000399753 HPS3Q969F9 1004 aa18.17■□□□□ 0.5
MSRB1-202ENST00000399753 GTPBP2Q9BX10 602 aaKnown RBP18.17■□□□□ 0.5
MSRB1-202ENST00000399753 B3GNT5Q9BYG0 378 aa18.17■□□□□ 0.5
MSRB1-202ENST00000399753 CAPN10Q9HC96 672 aa18.17■□□□□ 0.5
MSRB1-202ENST00000399753 DSPP15924 2871 aaKnown RBP18.17■□□□□ 0.5
MSRB1-202ENST00000399753 PLXND1Q9Y4D7 1925 aa18.17■□□□□ 0.5
MSRB1-202ENST00000399753 MYO18AQ92614 2054 aaKnown RBP18.16■□□□□ 0.5
MSRB1-202ENST00000399753 TULP3O75386 442 aa18.16■□□□□ 0.5
MSRB1-202ENST00000399753 RTN3O95197 1032 aaPredicted RBP18.16■□□□□ 0.5
MSRB1-202ENST00000399753 SERPINF2P08697 491 aa18.16■□□□□ 0.5
MSRB1-202ENST00000399753 DLATP10515 647 aaKnown RBP18.16■□□□□ 0.5
MSRB1-202ENST00000399753 GABRG2P18507 467 aa18.16■□□□□ 0.5
MSRB1-202ENST00000399753 TNNI1P19237 187 aa18.16■□□□□ 0.5
MSRB1-202ENST00000399753 TNNC1P63316 161 aa18.16■□□□□ 0.5
MSRB1-202ENST00000399753 CEBPZQ03701 1054 aaKnown RBP18.16■□□□□ 0.5
MSRB1-202ENST00000399753 SNRNP35Q16560 246 aaKnown RBP18.16■□□□□ 0.5
MSRB1-202ENST00000399753 PREPLQ4J6C6 727 aaPredicted RBP18.16■□□□□ 0.5
MSRB1-202ENST00000399753 HECTD3Q5T447 861 aa18.16■□□□□ 0.5
MSRB1-202ENST00000399753 FAM173BQ6P4H8 233 aa18.16■□□□□ 0.5
MSRB1-202ENST00000399753 SLC36A4Q6YBV0 504 aa18.16■□□□□ 0.5
MSRB1-202ENST00000399753 DEFB119Q8N690 84 aa18.16■□□□□ 0.5
MSRB1-202ENST00000399753 B3GALNT2Q8NCR0 500 aa18.16■□□□□ 0.5
MSRB1-202ENST00000399753 FBXO32Q969P5 355 aa18.16■□□□□ 0.5
MSRB1-202ENST00000399753 DEC1Q9P2X7 70 aa18.16■□□□□ 0.5
MSRB1-202ENST00000399753 CHORDC1Q9UHD1 332 aaPredicted RBP18.16■□□□□ 0.5
MSRB1-202ENST00000399753 A8MXQ7 604 aa18.15■□□□□ 0.5
MSRB1-202ENST00000399753 H0Y626 953 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms