RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 AOX1Q06278 1338 aa8.85□□□□□ -0.99
CACNA1C-220ENST00000399655 ERBINQ96RT1 1412 aa8.85□□□□□ -0.99
CACNA1C-220ENST00000399655 CLRN2A0PK11 232 aa8.85□□□□□ -0.99
CACNA1C-220ENST00000399655 CDH16O75309 829 aa8.85□□□□□ -0.99
CACNA1C-220ENST00000399655 IFNA7P01567 189 aa8.85□□□□□ -0.99
CACNA1C-220ENST00000399655 GRK5P34947 590 aa8.85□□□□□ -0.99
CACNA1C-220ENST00000399655 TBC1D25Q3MII6 688 aa8.85□□□□□ -0.99
CACNA1C-220ENST00000399655 MDH1BQ5I0G3 518 aa8.85□□□□□ -0.99
CACNA1C-220ENST00000399655 CHCHD4Q8N4Q1 142 aa8.85□□□□□ -0.99
CACNA1C-220ENST00000399655 C12orf50Q8NA57 414 aaPredicted RBP8.85□□□□□ -0.99
CACNA1C-220ENST00000399655 SPERTQ8NA61 448 aa8.85□□□□□ -0.99
CACNA1C-220ENST00000399655 SCFD2Q8WU76 684 aa8.85□□□□□ -0.99
CACNA1C-220ENST00000399655 NXNL1Q96CM4 212 aa8.85□□□□□ -0.99
CACNA1C-220ENST00000399655 PGAP3Q96FM1 320 aaPredicted RBP8.85□□□□□ -0.99
CACNA1C-220ENST00000399655 CITED4Q96RK1 184 aa8.85□□□□□ -0.99
CACNA1C-220ENST00000399655 SNRKQ9NRH2 765 aa8.85□□□□□ -0.99
CACNA1C-220ENST00000399655 GMIPQ9P107 970 aa8.85□□□□□ -0.99
CACNA1C-220ENST00000399655 C3orf70A6NLC5 250 aaPredicted RBP8.84□□□□□ -0.99
CACNA1C-220ENST00000399655 DENND5AQ6IQ26 1287 aa8.84□□□□□ -0.99
CACNA1C-220ENST00000399655 BHLHB9Q6PI77 547 aa8.84□□□□□ -0.99
CACNA1C-220ENST00000399655 ZNF605Q86T29 641 aa8.84□□□□□ -0.99
CACNA1C-220ENST00000399655 WDR49Q8IV35 697 aa8.84□□□□□ -0.99
CACNA1C-220ENST00000399655 APOL2Q9BQE5 337 aa8.84□□□□□ -0.99
CACNA1C-220ENST00000399655 TOPORSQ9NS56 1045 aaPredicted RBP8.84□□□□□ -0.99
CACNA1C-220ENST00000399655 CD274Q9NZQ7 290 aa8.84□□□□□ -0.99
CACNA1C-220ENST00000399655 TELO2Q9Y4R8 837 aa8.84□□□□□ -0.99
CACNA1C-220ENST00000399655 A0A088AWK7 358 aa8.84□□□□□ -0.99
CACNA1C-220ENST00000399655 FAM187AA6NFU0 413 aa8.84□□□□□ -0.99
CACNA1C-220ENST00000399655 TMEM114B3SHH9 223 aa8.84□□□□□ -0.99
CACNA1C-220ENST00000399655 ZNF10P21506 573 aaPredicted RBP8.84□□□□□ -0.99
CACNA1C-220ENST00000399655 TMC4Q7Z404 712 aa8.84□□□□□ -0.99
CACNA1C-220ENST00000399655 GIPC3Q8TF64 312 aa8.84□□□□□ -0.99
CACNA1C-220ENST00000399655 CNOT6LQ96LI5 555 aaKnown RBP8.84□□□□□ -0.99
CACNA1C-220ENST00000399655 DCLRE1BQ9H816 532 aa8.84□□□□□ -0.99
CACNA1C-220ENST00000399655 UBQLN1Q9UMX0 589 aaKnown RBP8.84□□□□□ -0.99
CACNA1C-220ENST00000399655 H7C2Y5 167 aa8.84□□□□□ -0.99
CACNA1C-220ENST00000399655 PNMA6AP0CW24 399 aaPredicted RBP8.84□□□□□ -0.99
CACNA1C-220ENST00000399655 POU5F1Q01860 360 aaKnown RBP8.84□□□□□ -0.99
CACNA1C-220ENST00000399655 GNA12Q03113 381 aa8.84□□□□□ -0.99
CACNA1C-220ENST00000399655 BARGINQ6ZT62 677 aa8.84□□□□□ -0.99
CACNA1C-220ENST00000399655 KLHL23Q8NBE8 558 aa8.84□□□□□ -0.99
CACNA1C-220ENST00000399655 TNFAIP8L1Q8WVP5 186 aa8.84□□□□□ -0.99
CACNA1C-220ENST00000399655 TUT1Q9H6E5 874 aaKnown RBP8.84□□□□□ -0.99
CACNA1C-220ENST00000399655 PCDHGA10Q9Y5H3 936 aa8.84□□□□□ -0.99
CACNA1C-220ENST00000399655 ARHGAP31Q2M1Z3 1444 aa8.84□□□□□ -0.99
CACNA1C-220ENST00000399655 SLC16A8O95907 504 aa8.84□□□□□ -0.99
CACNA1C-220ENST00000399655 F8A1P23610 371 aa8.84□□□□□ -0.99
CACNA1C-220ENST00000399655 OASLQ15646 514 aaKnown RBP8.84□□□□□ -0.99
CACNA1C-220ENST00000399655 TRMT5Q32P41 509 aaKnown RBP8.84□□□□□ -0.99
CACNA1C-220ENST00000399655 WNT8AQ9H1J5 351 aa8.84□□□□□ -0.99
CACNA1C-220ENST00000399655 SUGCTQ9HAC7 445 aa8.84□□□□□ -0.99
CACNA1C-220ENST00000399655 TBC1D30Q9Y2I9 924 aa8.84□□□□□ -0.99
CACNA1C-220ENST00000399655 ABCA1O95477 2261 aa8.84□□□□□ -0.99
CACNA1C-220ENST00000399655 BORCS7-ASMTA0A0B4J1R7 106 aa8.84□□□□□ -0.99
CACNA1C-220ENST00000399655 HS6ST1O60243 411 aa8.84□□□□□ -0.99
CACNA1C-220ENST00000399655 RPL13AP40429 203 aaKnown RBP8.84□□□□□ -0.99
CACNA1C-220ENST00000399655 EIF6P56537 245 aaKnown RBP8.84□□□□□ -0.99
CACNA1C-220ENST00000399655 GPS1Q13098 491 aa8.84□□□□□ -0.99
CACNA1C-220ENST00000399655 CWF19L1Q69YN2 538 aaKnown RBP8.84□□□□□ -0.99
CACNA1C-220ENST00000399655 MIGA2Q7L4E1 593 aa8.84□□□□□ -0.99
CACNA1C-220ENST00000399655 MOB1BQ7L9L4 216 aa8.84□□□□□ -0.99
CACNA1C-220ENST00000399655 RAD54LQ92698 747 aa8.84□□□□□ -0.99
CACNA1C-220ENST00000399655 BORCS7Q96B45 105 aa8.84□□□□□ -0.99
CACNA1C-220ENST00000399655 RBM17Q96I25 401 aaKnown RBP8.84□□□□□ -0.99
CACNA1C-220ENST00000399655 SLC38A2Q96QD8 506 aa8.84□□□□□ -0.99
CACNA1C-220ENST00000399655 RTKNQ9BST9 563 aa8.84□□□□□ -0.99
CACNA1C-220ENST00000399655 HPS4Q9NQG7 708 aa8.84□□□□□ -0.99
CACNA1C-220ENST00000399655 FAM47DPA6NHR8 397 aa8.84□□□□□ -0.99
CACNA1C-220ENST00000399655 CFBP00751 764 aa8.84□□□□□ -0.99
CACNA1C-220ENST00000399655 TRIP13Q15645 432 aaPredicted RBP8.84□□□□□ -0.99
CACNA1C-220ENST00000399655 ACCSLQ4AC99 568 aa8.84□□□□□ -0.99
CACNA1C-220ENST00000399655 INO80DQ53TQ3 878 aaPredicted RBP8.84□□□□□ -0.99
CACNA1C-220ENST00000399655 AGMOQ6ZNB7 445 aa8.84□□□□□ -0.99
CACNA1C-220ENST00000399655 CYFIP1Q7L576 1253 aa8.84□□□□□ -0.99
CACNA1C-220ENST00000399655 METTL6Q8TCB7 284 aa8.84□□□□□ -0.99
CACNA1C-220ENST00000399655 ELMO1Q92556 727 aa8.84□□□□□ -0.99
CACNA1C-220ENST00000399655 NECTIN3Q9NQS3 549 aa8.84□□□□□ -0.99
CACNA1C-220ENST00000399655 UHRF1BP1Q6BDS2 1440 aa8.84□□□□□ -0.99
CACNA1C-220ENST00000399655 NTRK1P04629 796 aa8.84□□□□□ -0.99
CACNA1C-220ENST00000399655 GEMIN4P57678 1058 aaKnown RBP8.84□□□□□ -0.99
CACNA1C-220ENST00000399655 SQLEQ14534 574 aa8.84□□□□□ -0.99
CACNA1C-220ENST00000399655 WDR59Q6PJI9 974 aa8.84□□□□□ -0.99
CACNA1C-220ENST00000399655 DNAAF5Q86Y56 855 aa8.84□□□□□ -0.99
CACNA1C-220ENST00000399655 C9orf16Q9BUW7 83 aa8.84□□□□□ -0.99
CACNA1C-220ENST00000399655 NR5A2O00482 541 aa8.84□□□□□ -0.99
CACNA1C-220ENST00000399655 PRG2P13727 222 aa8.84□□□□□ -0.99
CACNA1C-220ENST00000399655 CC2D1AQ6P1N0 951 aaPredicted RBP8.84□□□□□ -0.99
CACNA1C-220ENST00000399655 BNC2Q6ZN30 1099 aaPredicted RBP8.84□□□□□ -0.99
CACNA1C-220ENST00000399655 THEMISQ8N1K5 641 aaPredicted RBP8.84□□□□□ -0.99
CACNA1C-220ENST00000399655 REXO5Q96IC2 774 aaKnown RBP8.84□□□□□ -0.99
CACNA1C-220ENST00000399655 NPAS2Q99743 824 aa8.84□□□□□ -0.99
CACNA1C-220ENST00000399655 CYLDQ9NQC7 956 aa8.84□□□□□ -0.99
CACNA1C-220ENST00000399655 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.84□□□□□ -0.99
CACNA1C-220ENST00000399655 HBS1LQ9Y450 684 aaKnown RBP8.84□□□□□ -0.99
CACNA1C-220ENST00000399655 POGZQ7Z3K3 1410 aa8.84□□□□□ -0.99
CACNA1C-220ENST00000399655 SLC35F4A4IF30 521 aa8.84□□□□□ -0.99
CACNA1C-220ENST00000399655 PVALBP20472 110 aaPredicted RBP8.84□□□□□ -0.99
CACNA1C-220ENST00000399655 RPL9P32969 192 aaKnown RBP8.84□□□□□ -0.99
CACNA1C-220ENST00000399655 UGT1A5P35504 534 aa8.84□□□□□ -0.99
CACNA1C-220ENST00000399655 COPZ1P61923 177 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms