RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 MDM2Q00987 491 aaPredicted RBP11.34□□□□□ -0.59
CACNA1C-216ENST00000399638 BEX3Q00994 111 aa11.34□□□□□ -0.59
CACNA1C-216ENST00000399638 ARID5BQ14865 1188 aa11.34□□□□□ -0.59
CACNA1C-216ENST00000399638 ZNF484Q5JVG2 852 aa11.34□□□□□ -0.59
CACNA1C-216ENST00000399638 MARK2Q7KZI7 788 aaKnown RBP11.34□□□□□ -0.59
CACNA1C-216ENST00000399638 KRT73Q86Y46 540 aa11.34□□□□□ -0.59
CACNA1C-216ENST00000399638 ATL2Q8NHH9 583 aa11.34□□□□□ -0.59
CACNA1C-216ENST00000399638 OSMRQ99650 979 aa11.34□□□□□ -0.59
CACNA1C-216ENST00000399638 GMEB2Q9UKD1 530 aa11.34□□□□□ -0.59
CACNA1C-216ENST00000399638 RPTORQ8N122 1335 aa11.34□□□□□ -0.59
CACNA1C-216ENST00000399638 STK36Q9NRP7 1315 aa11.34□□□□□ -0.59
CACNA1C-216ENST00000399638 TRAV19A0A0A6YYK7 116 aa11.34□□□□□ -0.59
CACNA1C-216ENST00000399638 A0A1B0GW55 424 aa11.34□□□□□ -0.59
CACNA1C-216ENST00000399638 PALMO75781 387 aa11.34□□□□□ -0.59
CACNA1C-216ENST00000399638 SRP72O76094 671 aaKnown RBP11.34□□□□□ -0.59
CACNA1C-216ENST00000399638 FAM107AO95990 144 aa11.34□□□□□ -0.59
CACNA1C-216ENST00000399638 DUX4L2P0CJ85 424 aa11.34□□□□□ -0.59
CACNA1C-216ENST00000399638 DUX4L3P0CJ86 424 aa11.34□□□□□ -0.59
CACNA1C-216ENST00000399638 DUX4L4P0CJ87 422 aa11.34□□□□□ -0.59
CACNA1C-216ENST00000399638 DUX4L5P0CJ88 424 aa11.34□□□□□ -0.59
CACNA1C-216ENST00000399638 DUX4L6P0CJ89 424 aa11.34□□□□□ -0.59
CACNA1C-216ENST00000399638 DUX4L7P0CJ90 424 aa11.34□□□□□ -0.59
CACNA1C-216ENST00000399638 EIF3BP55884 814 aaKnown RBP11.34□□□□□ -0.59
CACNA1C-216ENST00000399638 USP10Q14694 798 aaKnown RBP11.34□□□□□ -0.59
CACNA1C-216ENST00000399638 RESP18Q5W5W9 173 aa11.34□□□□□ -0.59
CACNA1C-216ENST00000399638 DUX4Q9UBX2 424 aa11.34□□□□□ -0.59
CACNA1C-216ENST00000399638 NCF1BA6NI72 391 aaPredicted RBP11.34□□□□□ -0.59
CACNA1C-216ENST00000399638 NCF1CA8MVU1 366 aaPredicted RBP11.34□□□□□ -0.59
CACNA1C-216ENST00000399638 NFIBO00712 420 aa11.34□□□□□ -0.59
CACNA1C-216ENST00000399638 WEE2P0C1S8 567 aa11.34□□□□□ -0.59
CACNA1C-216ENST00000399638 NCF1P14598 390 aaPredicted RBP11.34□□□□□ -0.59
CACNA1C-216ENST00000399638 CEBPGP53567 150 aa11.34□□□□□ -0.59
CACNA1C-216ENST00000399638 CYP24A1Q07973 514 aa11.34□□□□□ -0.59
CACNA1C-216ENST00000399638 EFHC1Q5JVL4 640 aa11.34□□□□□ -0.59
CACNA1C-216ENST00000399638 ZYG11AQ6WRX3 759 aa11.34□□□□□ -0.59
CACNA1C-216ENST00000399638 CLEC10AQ8IUN9 316 aa11.34□□□□□ -0.59
CACNA1C-216ENST00000399638 SLC20A1Q8WUM9 679 aa11.34□□□□□ -0.59
CACNA1C-216ENST00000399638 PAGE5Q96GU1 130 aa11.34□□□□□ -0.59
CACNA1C-216ENST00000399638 PCDHB5Q9Y5E4 795 aa11.34□□□□□ -0.59
CACNA1C-216ENST00000399638 NCAPD2Q15021 1401 aa11.34□□□□□ -0.59
CACNA1C-216ENST00000399638 ANGPT2O15123 496 aa11.34□□□□□ -0.59
CACNA1C-216ENST00000399638 INPP4BO15327 924 aa11.34□□□□□ -0.59
CACNA1C-216ENST00000399638 TRIM3O75382 744 aaPredicted RBP11.34□□□□□ -0.59
CACNA1C-216ENST00000399638 TRIM49P0CI25 452 aa11.34□□□□□ -0.59
CACNA1C-216ENST00000399638 TRIM49CP0CI26 452 aa11.34□□□□□ -0.59
CACNA1C-216ENST00000399638 PLA2G4AP47712 749 aa11.34□□□□□ -0.59
CACNA1C-216ENST00000399638 POU4F1Q01851 419 aa11.34□□□□□ -0.59
CACNA1C-216ENST00000399638 AGMOQ6ZNB7 445 aa11.34□□□□□ -0.59
CACNA1C-216ENST00000399638 RDM1Q8NG50 284 aa11.34□□□□□ -0.59
CACNA1C-216ENST00000399638 TFB1MQ8WVM0 346 aaKnown RBP11.34□□□□□ -0.59
CACNA1C-216ENST00000399638 STRBPQ96SI9 672 aaKnown RBP11.34□□□□□ -0.59
CACNA1C-216ENST00000399638 DDIT4Q9NX09 232 aa11.34□□□□□ -0.59
CACNA1C-216ENST00000399638 A8MX80 341 aa11.34□□□□□ -0.59
CACNA1C-216ENST00000399638 PARNO95453 639 aaKnown RBP11.34□□□□□ -0.59
CACNA1C-216ENST00000399638 TDP2O95551 362 aa11.34□□□□□ -0.59
CACNA1C-216ENST00000399638 ADORA2AP29274 412 aa11.34□□□□□ -0.59
CACNA1C-216ENST00000399638 PFKFB3Q16875 520 aaPredicted RBP11.34□□□□□ -0.59
CACNA1C-216ENST00000399638 INSCQ1MX18 579 aa11.34□□□□□ -0.59
CACNA1C-216ENST00000399638 KAT2BQ92831 832 aa11.34□□□□□ -0.59
CACNA1C-216ENST00000399638 CXorf40BQ96DE9 158 aa11.34□□□□□ -0.59
CACNA1C-216ENST00000399638 BTBD9Q96Q07 612 aa11.34□□□□□ -0.59
CACNA1C-216ENST00000399638 SPRTNQ9H040 489 aaPredicted RBP11.34□□□□□ -0.59
CACNA1C-216ENST00000399638 EPN3Q9H201 632 aa11.34□□□□□ -0.59
CACNA1C-216ENST00000399638 ASAH2Q9NR71 780 aa11.34□□□□□ -0.59
CACNA1C-216ENST00000399638 TRPC4Q9UBN4 977 aa11.34□□□□□ -0.59
CACNA1C-216ENST00000399638 SNX8Q9Y5X2 465 aa11.34□□□□□ -0.59
CACNA1C-216ENST00000399638 PMPCBO75439 489 aa11.33□□□□□ -0.59
CACNA1C-216ENST00000399638 OR6A2O95222 327 aa11.33□□□□□ -0.59
CACNA1C-216ENST00000399638 ANXA5P08758 320 aa11.33□□□□□ -0.59
CACNA1C-216ENST00000399638 CLCN3P51790 818 aa11.33□□□□□ -0.59
CACNA1C-216ENST00000399638 IRX1P78414 480 aaPredicted RBP11.33□□□□□ -0.59
CACNA1C-216ENST00000399638 PPIL2Q13356 520 aa11.33□□□□□ -0.59
CACNA1C-216ENST00000399638 ULK3Q6PHR2 472 aa11.33□□□□□ -0.59
CACNA1C-216ENST00000399638 RNF19BQ6ZMZ0 732 aa11.33□□□□□ -0.59
CACNA1C-216ENST00000399638 NT5DC3Q86UY8 548 aa11.33□□□□□ -0.59
CACNA1C-216ENST00000399638 PPP1R2P1Q96PQ5 205 aa11.33□□□□□ -0.59
CACNA1C-216ENST00000399638 CAMKK2Q96RR4 588 aa11.33□□□□□ -0.59
CACNA1C-216ENST00000399638 ZDHHC6Q9H6R6 413 aa11.33□□□□□ -0.59
CACNA1C-216ENST00000399638 MLXIPLQ9NP71 852 aa11.33□□□□□ -0.59
CACNA1C-216ENST00000399638 CXCL14O95715 111 aa11.33□□□□□ -0.6
CACNA1C-216ENST00000399638 FGBP02675 491 aa11.33□□□□□ -0.6
CACNA1C-216ENST00000399638 INHBEP58166 350 aa11.33□□□□□ -0.6
CACNA1C-216ENST00000399638 ABCE1P61221 599 aaKnown RBP11.33□□□□□ -0.6
CACNA1C-216ENST00000399638 ITGADQ13349 1161 aa11.33□□□□□ -0.6
CACNA1C-216ENST00000399638 KLHL38Q2WGJ6 581 aa11.33□□□□□ -0.6
CACNA1C-216ENST00000399638 APLFQ8IW19 511 aaPredicted RBP11.33□□□□□ -0.6
CACNA1C-216ENST00000399638 USP7Q93009 1102 aa11.33□□□□□ -0.6
CACNA1C-216ENST00000399638 ZFATQ9P243 1243 aa11.33□□□□□ -0.6
CACNA1C-216ENST00000399638 VPS51Q9UID3 782 aa11.33□□□□□ -0.6
CACNA1C-216ENST00000399638 MRPS17Q9Y2R5 130 aaKnown RBP11.33□□□□□ -0.6
CACNA1C-216ENST00000399638 ARIH1Q9Y4X5 557 aaPredicted RBP11.33□□□□□ -0.6
CACNA1C-216ENST00000399638 ADGRG1Q9Y653 693 aa11.33□□□□□ -0.6
CACNA1C-216ENST00000399638 MYO3AQ8NEV4 1616 aa11.33□□□□□ -0.6
CACNA1C-216ENST00000399638 GRSF1Q12849 480 aaKnown RBP eCLIP11.33□□□□□ -0.6
CACNA1C-216ENST00000399638 PDIA2Q13087 525 aaKnown RBP11.33□□□□□ -0.6
CACNA1C-216ENST00000399638 SETMARQ53H47 684 aaPredicted RBP11.33□□□□□ -0.6
CACNA1C-216ENST00000399638 ZNHIT2Q9UHR6 403 aa11.33□□□□□ -0.6
CACNA1C-216ENST00000399638 FGGP02679 453 aa11.33□□□□□ -0.6
CACNA1C-216ENST00000399638 NMT1P30419 496 aaKnown RBP11.33□□□□□ -0.6
CACNA1C-216ENST00000399638 NPEPPSP55786 919 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms