RNA–Protein interactions for RNA: ENST00000399523.5

UFD1-202, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best) BASIC

Gene UFD1, Length 1,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-202ENST00000399523 SCARA3Q6AZY7 606 aa19.27■□□□□ 0.68
UFD1-202ENST00000399523 DDX42Q86XP3 938 aaKnown RBP eCLIP19.27■□□□□ 0.68
UFD1-202ENST00000399523 ADGRF2Q8IZF7 708 aa19.27■□□□□ 0.68
UFD1-202ENST00000399523 ST6GALNAC4Q9H4F1 302 aa19.27■□□□□ 0.68
UFD1-202ENST00000399523 EHD2Q9NZN4 543 aa19.27■□□□□ 0.68
UFD1-202ENST00000399523 STARD13Q9Y3M8 1113 aa19.27■□□□□ 0.68
UFD1-202ENST00000399523 SNX9Q9Y5X1 595 aa19.27■□□□□ 0.68
UFD1-202ENST00000399523 ATP2C2O75185 946 aa19.26■□□□□ 0.67
UFD1-202ENST00000399523 NTSR1P30989 418 aa19.26■□□□□ 0.67
UFD1-202ENST00000399523 NOP14P78316 857 aaKnown RBP19.26■□□□□ 0.67
UFD1-202ENST00000399523 HMGN5P82970 282 aaKnown RBP19.26■□□□□ 0.67
UFD1-202ENST00000399523 TFAMQ00059 246 aaKnown RBP19.26■□□□□ 0.67
UFD1-202ENST00000399523 SOWAHAQ2M3V2 549 aa19.26■□□□□ 0.67
UFD1-202ENST00000399523 PREPLQ4J6C6 727 aaPredicted RBP19.26■□□□□ 0.67
UFD1-202ENST00000399523 SYCP2LQ5T4T6 812 aa19.26■□□□□ 0.67
UFD1-202ENST00000399523 MIB1Q86YT6 1006 aa19.26■□□□□ 0.67
UFD1-202ENST00000399523 CCDC83Q8IWF9 413 aa19.26■□□□□ 0.67
UFD1-202ENST00000399523 SCUBE3Q8IX30 993 aa19.26■□□□□ 0.67
UFD1-202ENST00000399523 RGL4Q8IZJ4 473 aa19.26■□□□□ 0.67
UFD1-202ENST00000399523 OTUB2Q96DC9 234 aa19.26■□□□□ 0.67
UFD1-202ENST00000399523 CYP8B1Q9UNU6 501 aa19.26■□□□□ 0.67
UFD1-202ENST00000399523 ZNF462Q96JM2 2506 aa19.26■□□□□ 0.67
UFD1-202ENST00000399523 E2F8A0AVK6 867 aa19.25■□□□□ 0.67
UFD1-202ENST00000399523 ZBTB24O43167 697 aaPredicted RBP19.25■□□□□ 0.67
UFD1-202ENST00000399523 HOXC11O43248 304 aaPredicted RBP19.25■□□□□ 0.67
UFD1-202ENST00000399523 SLC26A4O43511 780 aa19.25■□□□□ 0.67
UFD1-202ENST00000399523 TULP3O75386 442 aa19.25■□□□□ 0.67
UFD1-202ENST00000399523 PLCG1P19174 1290 aa19.25■□□□□ 0.67
UFD1-202ENST00000399523 NDUFV2P19404 249 aa19.25■□□□□ 0.67
UFD1-202ENST00000399523 BDNFP23560 247 aa19.25■□□□□ 0.67
UFD1-202ENST00000399523 GRIK1P39086 918 aa19.25■□□□□ 0.67
UFD1-202ENST00000399523 POSTNQ15063 836 aa19.25■□□□□ 0.67
UFD1-202ENST00000399523 NUDT18Q6ZVK8 323 aa19.25■□□□□ 0.67
UFD1-202ENST00000399523 LIMS2Q7Z4I7 341 aa19.25■□□□□ 0.67
UFD1-202ENST00000399523 TERB1Q8NA31 727 aa19.25■□□□□ 0.67
UFD1-202ENST00000399523 BAHD1Q8TBE0 780 aaPredicted RBP19.25■□□□□ 0.67
UFD1-202ENST00000399523 CACTINQ8WUQ7 758 aaKnown RBP19.25■□□□□ 0.67
UFD1-202ENST00000399523 POMGNT1Q8WZA1 660 aa19.25■□□□□ 0.67
UFD1-202ENST00000399523 FOXJ1Q92949 421 aa19.25■□□□□ 0.67
UFD1-202ENST00000399523 MYLPFQ96A32 169 aa19.25■□□□□ 0.67
UFD1-202ENST00000399523 UBL7Q96S82 380 aaPredicted RBP19.25■□□□□ 0.67
UFD1-202ENST00000399523 SYT15Q9BQS2 421 aa19.25■□□□□ 0.67
UFD1-202ENST00000399523 IKZF4Q9H2S9 585 aa19.25■□□□□ 0.67
UFD1-202ENST00000399523 CRTAC1Q9NQ79 661 aa19.25■□□□□ 0.67
UFD1-202ENST00000399523 TOR4AQ9NXH8 423 aa19.25■□□□□ 0.67
UFD1-202ENST00000399523 DEC1Q9P2X7 70 aa19.25■□□□□ 0.67
UFD1-202ENST00000399523 ITGA11Q9UKX5 1188 aa19.25■□□□□ 0.67
UFD1-202ENST00000399523 CDH9Q9ULB4 789 aa19.25■□□□□ 0.67
UFD1-202ENST00000399523 PTPRQQ9UMZ3 2332 aa19.25■□□□□ 0.67
UFD1-202ENST00000399523 VWA3AA6NCI4 1184 aa19.24■□□□□ 0.67
UFD1-202ENST00000399523 TK2O00142 265 aa19.24■□□□□ 0.67
UFD1-202ENST00000399523 NDUFS2O75306 463 aa19.24■□□□□ 0.67
UFD1-202ENST00000399523 ZNF883P0CG24 379 aa19.24■□□□□ 0.67
UFD1-202ENST00000399523 ANXA13P27216 316 aa19.24■□□□□ 0.67
UFD1-202ENST00000399523 CYP4F3Q08477 520 aa19.24■□□□□ 0.67
UFD1-202ENST00000399523 MAPRE1Q15691 268 aaKnown RBP19.24■□□□□ 0.67
UFD1-202ENST00000399523 WDR45BQ5MNZ6 344 aa19.24■□□□□ 0.67
UFD1-202ENST00000399523 C10orf76Q5T2E6 689 aa19.24■□□□□ 0.67
UFD1-202ENST00000399523 BTBD8Q5XKL5 378 aa19.24■□□□□ 0.67
UFD1-202ENST00000399523 DPH6Q7L8W6 267 aa19.24■□□□□ 0.67
UFD1-202ENST00000399523 CSGALNACT2Q8N6G5 542 aa19.24■□□□□ 0.67
UFD1-202ENST00000399523 NAT16Q8N8M0 369 aa19.24■□□□□ 0.67
UFD1-202ENST00000399523 IPO4Q8TEX9 1081 aaKnown RBP19.24■□□□□ 0.67
UFD1-202ENST00000399523 CRELD1Q96HD1 420 aa19.24■□□□□ 0.67
UFD1-202ENST00000399523 DUSP9Q99956 384 aaKnown RBP19.24■□□□□ 0.67
UFD1-202ENST00000399523 ZHX3Q9H4I2 956 aa19.24■□□□□ 0.67
UFD1-202ENST00000399523 BLOC1S4Q9NUP1 217 aa19.24■□□□□ 0.67
UFD1-202ENST00000399523 SIX4Q9UIU6 781 aa19.24■□□□□ 0.67
UFD1-202ENST00000399523 LIMCH1Q9UPQ0 1083 aa19.24■□□□□ 0.67
UFD1-202ENST00000399523 NFE2L3Q9Y4A8 694 aa19.24■□□□□ 0.67
UFD1-202ENST00000399523 TRABD2BA6NFA1 517 aa19.23■□□□□ 0.67
UFD1-202ENST00000399523 TRIM66O15016 1216 aa19.23■□□□□ 0.67
UFD1-202ENST00000399523 LMO2P25791 158 aa19.23■□□□□ 0.67
UFD1-202ENST00000399523 MAOBP27338 520 aa19.23■□□□□ 0.67
UFD1-202ENST00000399523 WASP42768 502 aa19.23■□□□□ 0.67
UFD1-202ENST00000399523 PSMC1P62191 440 aaKnown RBP19.23■□□□□ 0.67
UFD1-202ENST00000399523 RBP5P82980 135 aa19.23■□□□□ 0.67
UFD1-202ENST00000399523 TAF10Q12962 218 aa19.23■□□□□ 0.67
UFD1-202ENST00000399523 CAMK2BQ13554 666 aa19.23■□□□□ 0.67
UFD1-202ENST00000399523 DHX8Q14562 1220 aaKnown RBP19.23■□□□□ 0.67
UFD1-202ENST00000399523 DBX2Q6ZNG2 339 aa19.23■□□□□ 0.67
UFD1-202ENST00000399523 BRSK2Q8IWQ3 736 aa19.23■□□□□ 0.67
UFD1-202ENST00000399523 FAM184AQ8NB25 1140 aa19.23■□□□□ 0.67
UFD1-202ENST00000399523 SETD7Q8WTS6 366 aaKnown RBP19.23■□□□□ 0.67
UFD1-202ENST00000399523 KBTBD7Q8WVZ9 684 aa19.23■□□□□ 0.67
UFD1-202ENST00000399523 DNASE2BQ8WZ79 361 aa19.23■□□□□ 0.67
UFD1-202ENST00000399523 ZFRQ96KR1 1074 aaKnown RBP19.23■□□□□ 0.67
UFD1-202ENST00000399523 C8orf48Q96LL4 319 aa19.23■□□□□ 0.67
UFD1-202ENST00000399523 TENM4Q6N022 2769 aa19.22■□□□□ 0.67
UFD1-202ENST00000399523 A0A1B0GTW7 788 aa19.22■□□□□ 0.67
UFD1-202ENST00000399523 TBCAO75347 108 aaKnown RBP19.22■□□□□ 0.67
UFD1-202ENST00000399523 C1QL1O75973 258 aa19.22■□□□□ 0.67
UFD1-202ENST00000399523 ABL1P00519 1130 aa19.22■□□□□ 0.67
UFD1-202ENST00000399523 PRB1P04280 392 aa19.22■□□□□ 0.67
UFD1-202ENST00000399523 KRT18P05783 430 aaKnown RBP19.22■□□□□ 0.67
UFD1-202ENST00000399523 MBL2P11226 248 aaPredicted RBP19.22■□□□□ 0.67
UFD1-202ENST00000399523 EGFLAMQ63HQ2 1017 aa19.22■□□□□ 0.67
UFD1-202ENST00000399523 ARL6IP4Q66PJ3 421 aaKnown RBP19.22■□□□□ 0.67
UFD1-202ENST00000399523 ZNF720Q7Z2F6 126 aa19.22■□□□□ 0.67
UFD1-202ENST00000399523 MRGPRX1Q96LB2 322 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms