RNA–Protein interactions for RNA: ENST00000399306.6

CTNS-203, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3 BASIC

Gene CTNS, Length 803 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-203ENST00000399306 ECI2O75521 394 aa18.61■□□□□ 0.57
CTNS-203ENST00000399306 FBXO21O94952 628 aa18.61■□□□□ 0.57
CTNS-203ENST00000399306 OLFM2O95897 454 aa18.61■□□□□ 0.57
CTNS-203ENST00000399306 HTR4Q13639 388 aa18.61■□□□□ 0.57
CTNS-203ENST00000399306 TRIM14Q14142 442 aa18.61■□□□□ 0.57
CTNS-203ENST00000399306 ZNF268Q14587 947 aaPredicted RBP18.61■□□□□ 0.57
CTNS-203ENST00000399306 GPR158Q5T848 1215 aa18.61■□□□□ 0.57
CTNS-203ENST00000399306 GPRIN1Q7Z2K8 1008 aa18.61■□□□□ 0.57
CTNS-203ENST00000399306 UBA3Q8TBC4 463 aa18.61■□□□□ 0.57
CTNS-203ENST00000399306 ING5Q8WYH8 240 aa18.61■□□□□ 0.57
CTNS-203ENST00000399306 IRGQQ8WZA9 623 aa18.61■□□□□ 0.57
CTNS-203ENST00000399306 SYN2Q92777 582 aaPredicted RBP18.61■□□□□ 0.57
CTNS-203ENST00000399306 ELSPBP1Q96BH3 223 aa18.61■□□□□ 0.57
CTNS-203ENST00000399306 MCRS1Q96EZ8 462 aa18.61■□□□□ 0.57
CTNS-203ENST00000399306 NOX5Q96PH1 765 aa18.61■□□□□ 0.57
CTNS-203ENST00000399306 SLC4A5Q9BY07 1137 aa18.61■□□□□ 0.57
CTNS-203ENST00000399306 RBSNQ9H1K0 784 aa18.61■□□□□ 0.57
CTNS-203ENST00000399306 KIF9Q9HAQ2 790 aa18.61■□□□□ 0.57
CTNS-203ENST00000399306 CLIC5Q9NZA1 410 aa18.61■□□□□ 0.57
CTNS-203ENST00000399306 AIPL1Q9NZN9 384 aa18.61■□□□□ 0.57
CTNS-203ENST00000399306 MYO16Q9Y6X6 1858 aa18.6■□□□□ 0.57
CTNS-203ENST00000399306 NRG2O14511 850 aaPredicted RBP18.6■□□□□ 0.57
CTNS-203ENST00000399306 SART1O43290 800 aaKnown RBP18.6■□□□□ 0.57
CTNS-203ENST00000399306 GFPT2O94808 682 aa18.6■□□□□ 0.57
CTNS-203ENST00000399306 ZBED1O96006 694 aa18.6■□□□□ 0.57
CTNS-203ENST00000399306 OAS1P00973 400 aaKnown RBP18.6■□□□□ 0.57
CTNS-203ENST00000399306 PNMA6AP0CW24 399 aaPredicted RBP18.6■□□□□ 0.57
CTNS-203ENST00000399306 TCF3P15923 654 aa18.6■□□□□ 0.57
CTNS-203ENST00000399306 TKTL1P51854 596 aa18.6■□□□□ 0.57
CTNS-203ENST00000399306 PMF1Q6P1K2 205 aa18.6■□□□□ 0.57
CTNS-203ENST00000399306 KLHDC10Q6PID8 442 aa18.6■□□□□ 0.57
CTNS-203ENST00000399306 TRIM72Q6ZMU5 477 aa18.6■□□□□ 0.57
CTNS-203ENST00000399306 TMEM110Q86TL2 294 aa18.6■□□□□ 0.57
CTNS-203ENST00000399306 GAS2L3Q86XJ1 694 aa18.6■□□□□ 0.57
CTNS-203ENST00000399306 CMTM8Q8IZV2 173 aa18.6■□□□□ 0.57
CTNS-203ENST00000399306 ZNF397Q8NF99 534 aaPredicted RBP18.6■□□□□ 0.57
CTNS-203ENST00000399306 ZSCAN18Q8TBC5 510 aaPredicted RBP18.6■□□□□ 0.57
CTNS-203ENST00000399306 CDK5RAP1Q96SZ6 601 aaKnown RBP18.6■□□□□ 0.57
CTNS-203ENST00000399306 SLC46A2Q9BY10 475 aa18.6■□□□□ 0.57
CTNS-203ENST00000399306 SLITRK6Q9H5Y7 841 aa18.6■□□□□ 0.57
CTNS-203ENST00000399306 ZFP14Q9HCL3 533 aa18.6■□□□□ 0.57
CTNS-203ENST00000399306 ACP6Q9NPH0 428 aa18.6■□□□□ 0.57
CTNS-203ENST00000399306 NOCTQ9UK39 431 aaKnown RBP18.6■□□□□ 0.57
CTNS-203ENST00000399306 CAPN11Q9UMQ6 739 aa18.6■□□□□ 0.57
CTNS-203ENST00000399306 VCANP13611 3396 aa18.59■□□□□ 0.57
CTNS-203ENST00000399306 TRAV19A0A0A6YYK7 116 aa18.59■□□□□ 0.57
CTNS-203ENST00000399306 TULP2O00295 520 aa18.59■□□□□ 0.57
CTNS-203ENST00000399306 USP17L7P0C7H9 530 aa18.59■□□□□ 0.57
CTNS-203ENST00000399306 GJA1P17302 382 aa18.59■□□□□ 0.57
CTNS-203ENST00000399306 SSTR3P32745 418 aaPredicted RBP18.59■□□□□ 0.57
CTNS-203ENST00000399306 ZBED6P86452 979 aa18.59■□□□□ 0.57
CTNS-203ENST00000399306 CYP4F8P98187 520 aa18.59■□□□□ 0.57
CTNS-203ENST00000399306 CDR2Q01850 454 aa18.59■□□□□ 0.57
CTNS-203ENST00000399306 FAM78AQ5JUQ0 283 aa18.59■□□□□ 0.57
CTNS-203ENST00000399306 SPECC1LQ69YQ0 1117 aa18.59■□□□□ 0.57
CTNS-203ENST00000399306 DENND1BQ6P3S1 775 aa18.59■□□□□ 0.57
CTNS-203ENST00000399306 POTEHQ6S545 545 aa18.59■□□□□ 0.57
CTNS-203ENST00000399306 TADA2BQ86TJ2 420 aa18.59■□□□□ 0.57
CTNS-203ENST00000399306 NOP9Q86U38 636 aaKnown RBP18.59■□□□□ 0.57
CTNS-203ENST00000399306 SIX6OS1Q8N1H7 587 aa18.59■□□□□ 0.57
CTNS-203ENST00000399306 TMEM35BQ8NCS4 154 aa18.59■□□□□ 0.57
CTNS-203ENST00000399306 DEPDC1BQ8WUY9 529 aa18.59■□□□□ 0.57
CTNS-203ENST00000399306 MIS12Q9H081 205 aa18.59■□□□□ 0.57
CTNS-203ENST00000399306 KCNK12Q9HB15 430 aa18.59■□□□□ 0.57
CTNS-203ENST00000399306 LIMD1Q9UGP4 676 aa18.59■□□□□ 0.57
CTNS-203ENST00000399306 CALCAP01258 141 aa18.58■□□□□ 0.56
CTNS-203ENST00000399306 FCARP24071 287 aa18.58■□□□□ 0.56
CTNS-203ENST00000399306 AVPR1AP37288 418 aa18.58■□□□□ 0.56
CTNS-203ENST00000399306 PRKCIP41743 596 aa18.58■□□□□ 0.56
CTNS-203ENST00000399306 SLC7A9P82251 487 aa18.58■□□□□ 0.56
CTNS-203ENST00000399306 HECTD3Q5T447 861 aa18.58■□□□□ 0.56
CTNS-203ENST00000399306 TXNDC8Q6A555 127 aa18.58■□□□□ 0.56
CTNS-203ENST00000399306 BEND5Q7L4P6 421 aa18.58■□□□□ 0.56
CTNS-203ENST00000399306 IRF2BP2Q7Z5L9 587 aa18.58■□□□□ 0.56
CTNS-203ENST00000399306 RNF135Q8IUD6 432 aa18.58■□□□□ 0.56
CTNS-203ENST00000399306 ARID3BQ8IVW6 561 aaPredicted RBP18.58■□□□□ 0.56
CTNS-203ENST00000399306 VSTM4Q8IW00 320 aa18.58■□□□□ 0.56
CTNS-203ENST00000399306 ZSWIM3Q96MP5 696 aa18.58■□□□□ 0.56
CTNS-203ENST00000399306 TRIM62Q9BVG3 475 aa18.58■□□□□ 0.56
CTNS-203ENST00000399306 GMIPQ9P107 970 aa18.58■□□□□ 0.56
CTNS-203ENST00000399306 ARHGAP26Q9UNA1 814 aa18.58■□□□□ 0.56
CTNS-203ENST00000399306 SORCS3Q9UPU3 1222 aa18.58■□□□□ 0.56
CTNS-203ENST00000399306 HELZP42694 1942 aaKnown RBP18.57■□□□□ 0.56
CTNS-203ENST00000399306 LRRC53A6NM62 1247 aa18.57■□□□□ 0.56
CTNS-203ENST00000399306 HDCP19113 662 aa18.57■□□□□ 0.56
CTNS-203ENST00000399306 DAOAP59103 153 aa18.57■□□□□ 0.56
CTNS-203ENST00000399306 ADIGQ0VDE8 80 aa18.57■□□□□ 0.56
CTNS-203ENST00000399306 IFRD2Q12894 506 aaPredicted RBP18.57■□□□□ 0.56
CTNS-203ENST00000399306 PDCLQ13371 301 aa18.57■□□□□ 0.56
CTNS-203ENST00000399306 TDGQ13569 410 aa18.57■□□□□ 0.56
CTNS-203ENST00000399306 PTPN21Q16825 1174 aa18.57■□□□□ 0.56
CTNS-203ENST00000399306 STXBP5Q5T5C0 1151 aa18.57■□□□□ 0.56
CTNS-203ENST00000399306 SFMBT2Q5VUG0 894 aa18.57■□□□□ 0.56
CTNS-203ENST00000399306 PPP1R2P3Q6NXS1 205 aa18.57■□□□□ 0.56
CTNS-203ENST00000399306 ZDHHC17Q8IUH5 632 aa18.57■□□□□ 0.56
CTNS-203ENST00000399306 WDTC1Q8N5D0 677 aa18.57■□□□□ 0.56
CTNS-203ENST00000399306 CELF5Q8N6W0 485 aaKnown RBP18.57■□□□□ 0.56
CTNS-203ENST00000399306 MAB21L3Q8N8X9 362 aa18.57■□□□□ 0.56
CTNS-203ENST00000399306 MSANTD4Q8NCY6 345 aa18.57■□□□□ 0.56
CTNS-203ENST00000399306 ULBP1Q9BZM6 244 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms