RNA–Protein interactions for RNA: ENST00000398661.6

HMGCLL1-205, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 2,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-205ENST00000398661 RRM1P23921 792 aa10.57□□□□□ -0.72
HMGCLL1-205ENST00000398661 VARSP26640 1264 aaKnown RBP10.57□□□□□ -0.72
HMGCLL1-205ENST00000398661 CPA2P48052 419 aa10.57□□□□□ -0.72
HMGCLL1-205ENST00000398661 CD97P48960 835 aa10.57□□□□□ -0.72
HMGCLL1-205ENST00000398661 STAT5BP51692 787 aa10.57□□□□□ -0.72
HMGCLL1-205ENST00000398661 APLP1P51693 650 aa10.57□□□□□ -0.72
HMGCLL1-205ENST00000398661 EMP3P54852 163 aa10.57□□□□□ -0.72
HMGCLL1-205ENST00000398661 ACTR3P61158 418 aa10.57□□□□□ -0.72
HMGCLL1-205ENST00000398661 ARHGAP44Q17R89 818 aa10.57□□□□□ -0.72
HMGCLL1-205ENST00000398661 CELF3Q5SZQ8 465 aaKnown RBP10.57□□□□□ -0.72
HMGCLL1-205ENST00000398661 TMCO4Q5TGY1 634 aa10.57□□□□□ -0.72
HMGCLL1-205ENST00000398661 NCCRP1Q6ZVX7 275 aaPredicted RBP10.57□□□□□ -0.72
HMGCLL1-205ENST00000398661 NIPA1Q7RTP0 329 aa10.57□□□□□ -0.72
HMGCLL1-205ENST00000398661 SLC20A1Q8WUM9 679 aa10.57□□□□□ -0.72
HMGCLL1-205ENST00000398661 PRICKLE1Q96MT3 831 aaPredicted RBP10.57□□□□□ -0.72
HMGCLL1-205ENST00000398661 GPR20Q99678 358 aa10.57□□□□□ -0.72
HMGCLL1-205ENST00000398661 KATNBL1Q9H079 304 aa10.57□□□□□ -0.72
HMGCLL1-205ENST00000398661 PCIF1Q9H4Z3 704 aa10.57□□□□□ -0.72
HMGCLL1-205ENST00000398661 TIMMDC1Q9NPL8 285 aa10.57□□□□□ -0.72
HMGCLL1-205ENST00000398661 GJD2Q9UKL4 321 aa10.57□□□□□ -0.72
HMGCLL1-205ENST00000398661 GINS2Q9Y248 185 aa10.57□□□□□ -0.72
HMGCLL1-205ENST00000398661 PLXNB2O15031 1838 aa10.57□□□□□ -0.72
HMGCLL1-205ENST00000398661 TTLL13PA6NNM8 815 aa10.56□□□□□ -0.72
HMGCLL1-205ENST00000398661 CA12O43570 354 aa10.56□□□□□ -0.72
HMGCLL1-205ENST00000398661 MTA2O94776 668 aa10.56□□□□□ -0.72
HMGCLL1-205ENST00000398661 PGM3O95394 542 aa10.56□□□□□ -0.72
HMGCLL1-205ENST00000398661 PGK1P00558 417 aa10.56□□□□□ -0.72
HMGCLL1-205ENST00000398661 PSAPP07602 524 aa10.56□□□□□ -0.72
HMGCLL1-205ENST00000398661 ZNF24P17028 368 aa10.56□□□□□ -0.72
HMGCLL1-205ENST00000398661 GTF2H1P32780 548 aa10.56□□□□□ -0.72
HMGCLL1-205ENST00000398661 BTG3Q14201 252 aaPredicted RBP10.56□□□□□ -0.72
HMGCLL1-205ENST00000398661 SLC44A4Q53GD3 710 aa10.56□□□□□ -0.72
HMGCLL1-205ENST00000398661 SFT2D3Q587I9 215 aa10.56□□□□□ -0.72
HMGCLL1-205ENST00000398661 METTL7BQ6UX53 244 aa10.56□□□□□ -0.72
HMGCLL1-205ENST00000398661 TMPRSS6Q8IU80 811 aa10.56□□□□□ -0.72
HMGCLL1-205ENST00000398661 BBOF1Q8ND07 529 aa10.56□□□□□ -0.72
HMGCLL1-205ENST00000398661 PIP4K2CQ8TBX8 421 aa10.56□□□□□ -0.72
HMGCLL1-205ENST00000398661 CD99L2Q8TCZ2 262 aa10.56□□□□□ -0.72
HMGCLL1-205ENST00000398661 GAB3Q8WWW8 586 aa10.56□□□□□ -0.72
HMGCLL1-205ENST00000398661 PSPC1Q8WXF1 523 aaKnown RBP10.56□□□□□ -0.72
HMGCLL1-205ENST00000398661 BTBD6Q96KE9 485 aa10.56□□□□□ -0.72
HMGCLL1-205ENST00000398661 KCNK13Q9HB14 408 aa10.56□□□□□ -0.72
HMGCLL1-205ENST00000398661 USP29Q9HBJ7 922 aa10.56□□□□□ -0.72
HMGCLL1-205ENST00000398661 XPNPEP1Q9NQW7 623 aa10.56□□□□□ -0.72
HMGCLL1-205ENST00000398661 DDX18Q9NVP1 670 aaKnown RBP10.56□□□□□ -0.72
HMGCLL1-205ENST00000398661 MYADML2A6NDP7 307 aa10.56□□□□□ -0.72
HMGCLL1-205ENST00000398661 FCHO1O14526 889 aa10.56□□□□□ -0.72
HMGCLL1-205ENST00000398661 FKBP6O75344 327 aa10.56□□□□□ -0.72
HMGCLL1-205ENST00000398661 TM7SF2O76062 418 aa10.56□□□□□ -0.72
HMGCLL1-205ENST00000398661 SMIM18P0DKX4 95 aa10.56□□□□□ -0.72
HMGCLL1-205ENST00000398661 PLS3P13797 630 aa10.56□□□□□ -0.72
HMGCLL1-205ENST00000398661 FUT4P22083 530 aa10.56□□□□□ -0.72
HMGCLL1-205ENST00000398661 ADRA1DP25100 572 aa10.56□□□□□ -0.72
HMGCLL1-205ENST00000398661 MAPK4P31152 587 aa10.56□□□□□ -0.72
HMGCLL1-205ENST00000398661 TM4SF4P48230 202 aa10.56□□□□□ -0.72
HMGCLL1-205ENST00000398661 CHN2P52757 468 aa10.56□□□□□ -0.72
HMGCLL1-205ENST00000398661 ARHGAP1Q07960 439 aa10.56□□□□□ -0.72
HMGCLL1-205ENST00000398661 TBL3Q12788 808 aaKnown RBP10.56□□□□□ -0.72
HMGCLL1-205ENST00000398661 MAP2K5Q13163 448 aa10.56□□□□□ -0.72
HMGCLL1-205ENST00000398661 MSLNQ13421 630 aaPredicted RBP10.56□□□□□ -0.72
HMGCLL1-205ENST00000398661 DCTN2Q13561 401 aaKnown RBP10.56□□□□□ -0.72
HMGCLL1-205ENST00000398661 PDK3Q15120 406 aa10.56□□□□□ -0.72
HMGCLL1-205ENST00000398661 MORN1Q5T089 497 aa10.56□□□□□ -0.72
HMGCLL1-205ENST00000398661 IZUMO3Q5VZ72 239 aa10.56□□□□□ -0.72
HMGCLL1-205ENST00000398661 ZNF746Q6NUN9 644 aaPredicted RBP10.56□□□□□ -0.72
HMGCLL1-205ENST00000398661 KLHDC10Q6PID8 442 aa10.56□□□□□ -0.72
HMGCLL1-205ENST00000398661 C1orf228Q6PIY5 440 aa10.56□□□□□ -0.72
HMGCLL1-205ENST00000398661 ADGRG6Q86SQ4 1221 aa10.56□□□□□ -0.72
HMGCLL1-205ENST00000398661 TTC7BQ86TV6 843 aa10.56□□□□□ -0.72
HMGCLL1-205ENST00000398661 TRIB2Q92519 343 aa10.56□□□□□ -0.72
HMGCLL1-205ENST00000398661 EVPLQ92817 2033 aa10.56□□□□□ -0.72
HMGCLL1-205ENST00000398661 FIZ1Q96SL8 496 aa10.56□□□□□ -0.72
HMGCLL1-205ENST00000398661 RBM15Q96T37 977 aaKnown RBP eCLIP10.56□□□□□ -0.72
HMGCLL1-205ENST00000398661 MAK16Q9BXY0 300 aaKnown RBP10.56□□□□□ -0.72
HMGCLL1-205ENST00000398661 INTS2Q9H0H0 1204 aaKnown RBP10.56□□□□□ -0.72
HMGCLL1-205ENST00000398661 ARHGEF38Q9NXL2 777 aa10.56□□□□□ -0.72
HMGCLL1-205ENST00000398661 SLC45A1Q9Y2W3 748 aa10.56□□□□□ -0.72
HMGCLL1-205ENST00000398661 CHD7Q9P2D1 2997 aa10.55□□□□□ -0.72
HMGCLL1-205ENST00000398661 UNCXA6NJT0 531 aa10.55□□□□□ -0.72
HMGCLL1-205ENST00000398661 H3BRJ5 948 aa10.55□□□□□ -0.72
HMGCLL1-205ENST00000398661 FOXN3O00409 490 aaPredicted RBP10.55□□□□□ -0.72
HMGCLL1-205ENST00000398661 ATMINO43313 823 aaPredicted RBP10.55□□□□□ -0.72
HMGCLL1-205ENST00000398661 STRNO43815 780 aa10.55□□□□□ -0.72
HMGCLL1-205ENST00000398661 ZFXP17010 805 aaPredicted RBP10.55□□□□□ -0.72
HMGCLL1-205ENST00000398661 VCLP18206 1134 aa10.55□□□□□ -0.72
HMGCLL1-205ENST00000398661 FMO5P49326 533 aa10.55□□□□□ -0.72
HMGCLL1-205ENST00000398661 SREBF2Q12772 1141 aa10.55□□□□□ -0.72
HMGCLL1-205ENST00000398661 NOGQ13253 232 aa10.55□□□□□ -0.72
HMGCLL1-205ENST00000398661 SEPT7Q16181 437 aaKnown RBP10.55□□□□□ -0.72
HMGCLL1-205ENST00000398661 SEZ6Q53EL9 994 aa10.55□□□□□ -0.72
HMGCLL1-205ENST00000398661 FAM178BQ8IXR5 827 aa10.55□□□□□ -0.72
HMGCLL1-205ENST00000398661 ULK2Q8IYT8 1036 aa10.55□□□□□ -0.72
HMGCLL1-205ENST00000398661 TMEM130Q8N3G9 435 aa10.55□□□□□ -0.72
HMGCLL1-205ENST00000398661 ZNF276Q8N554 614 aa10.55□□□□□ -0.72
HMGCLL1-205ENST00000398661 SHCBP1Q8NEM2 672 aa10.55□□□□□ -0.72
HMGCLL1-205ENST00000398661 TRPV1Q8NER1 839 aa10.55□□□□□ -0.72
HMGCLL1-205ENST00000398661 FAM172AQ8WUF8 416 aa10.55□□□□□ -0.72
HMGCLL1-205ENST00000398661 SPIRE2Q8WWL2 714 aa10.55□□□□□ -0.72
HMGCLL1-205ENST00000398661 RSPH1Q8WYR4 309 aa10.55□□□□□ -0.72
HMGCLL1-205ENST00000398661 CCDC97Q96F63 343 aaPredicted RBP10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms