RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 PPP1R9BQ96SB3 815 aa3.29□□□□□ -1.88
CD47-203ENST00000398258 SMOQ99835 787 aa3.29□□□□□ -1.88
CD47-203ENST00000398258 WACQ9BTA9 647 aa3.29□□□□□ -1.88
CD47-203ENST00000398258 MS4A7Q9GZW8 240 aaPredicted RBP3.29□□□□□ -1.88
CD47-203ENST00000398258 PPCSQ9HAB8 311 aa3.29□□□□□ -1.88
CD47-203ENST00000398258 GJB4Q9NTQ9 266 aa3.29□□□□□ -1.88
CD47-203ENST00000398258 DNMT3BQ9UBC3 853 aaKnown RBP3.29□□□□□ -1.88
CD47-203ENST00000398258 ZNF212Q9UDV6 495 aa3.29□□□□□ -1.88
CD47-203ENST00000398258 MID2Q9UJV3 735 aa3.29□□□□□ -1.88
CD47-203ENST00000398258 SHOC2Q9UQ13 582 aa3.29□□□□□ -1.88
CD47-203ENST00000398258 MAN2B2Q9Y2E5 1009 aa3.29□□□□□ -1.88
CD47-203ENST00000398258 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.29□□□□□ -1.88
CD47-203ENST00000398258 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.28□□□□□ -1.88
CD47-203ENST00000398258 PRAMEF33A0A0G2JMD5 474 aa3.28□□□□□ -1.88
CD47-203ENST00000398258 hCG_1642624A0A1W2PR95 340 aa3.28□□□□□ -1.88
CD47-203ENST00000398258 OR2W5A6NFC9 320 aa3.28□□□□□ -1.88
CD47-203ENST00000398258 NPC1O15118 1278 aa3.28□□□□□ -1.88
CD47-203ENST00000398258 TLR5O60602 858 aa3.28□□□□□ -1.88
CD47-203ENST00000398258 PRAMEF10O60809 474 aa3.28□□□□□ -1.88
CD47-203ENST00000398258 CSTBP04080 98 aaKnown RBP3.28□□□□□ -1.88
CD47-203ENST00000398258 EGR1P18146 543 aa3.28□□□□□ -1.88
CD47-203ENST00000398258 PPIFP30405 207 aaKnown RBP3.28□□□□□ -1.88
CD47-203ENST00000398258 LRPAP1P30533 357 aa3.28□□□□□ -1.88
CD47-203ENST00000398258 SLC5A2P31639 672 aa3.28□□□□□ -1.88
CD47-203ENST00000398258 GCLCP48506 637 aaPredicted RBP3.28□□□□□ -1.88
CD47-203ENST00000398258 CPT1AP50416 773 aa3.28□□□□□ -1.88
CD47-203ENST00000398258 DGKEP52429 567 aa3.28□□□□□ -1.88
CD47-203ENST00000398258 ZNF134P52741 427 aa3.28□□□□□ -1.88
CD47-203ENST00000398258 MAPK10P53779 464 aa3.28□□□□□ -1.88
CD47-203ENST00000398258 LOXL3P58215 753 aa3.28□□□□□ -1.88
CD47-203ENST00000398258 DYRK1AQ13627 763 aa3.28□□□□□ -1.88
CD47-203ENST00000398258 FHL1Q13642 323 aa3.28□□□□□ -1.88
CD47-203ENST00000398258 BLMHQ13867 455 aa3.28□□□□□ -1.88
CD47-203ENST00000398258 KLF9Q13886 244 aaPredicted RBP3.28□□□□□ -1.88
CD47-203ENST00000398258 ARHGEF7Q14155 803 aa3.28□□□□□ -1.88
CD47-203ENST00000398258 PTK2BQ14289 1009 aa3.28□□□□□ -1.88
CD47-203ENST00000398258 SLC29A2Q14542 456 aa3.28□□□□□ -1.88
CD47-203ENST00000398258 HLXQ14774 488 aaPredicted RBP3.28□□□□□ -1.88
CD47-203ENST00000398258 STARD3Q14849 445 aa3.28□□□□□ -1.88
CD47-203ENST00000398258 PDCD2Q16342 344 aaPredicted RBP3.28□□□□□ -1.88
CD47-203ENST00000398258 INSCQ1MX18 579 aa3.28□□□□□ -1.88
CD47-203ENST00000398258 ZACNQ401N2 412 aa3.28□□□□□ -1.88
CD47-203ENST00000398258 PLA1AQ53H76 456 aa3.28□□□□□ -1.88
CD47-203ENST00000398258 PLAG1Q6DJT9 500 aa3.28□□□□□ -1.88
CD47-203ENST00000398258 ZDHHC24Q6UX98 284 aa3.28□□□□□ -1.88
CD47-203ENST00000398258 ZNF527Q8NB42 609 aa3.28□□□□□ -1.88
CD47-203ENST00000398258 GLIS1Q8NBF1 620 aa3.28□□□□□ -1.88
CD47-203ENST00000398258 ZNF566Q969W8 418 aa3.28□□□□□ -1.88
CD47-203ENST00000398258 EID2BQ96D98 161 aa3.28□□□□□ -1.88
CD47-203ENST00000398258 SNX27Q96L92 541 aa3.28□□□□□ -1.88
CD47-203ENST00000398258 SLC46A1Q96NT5 459 aa3.28□□□□□ -1.88
CD47-203ENST00000398258 OSBPL9Q96SU4 736 aa3.28□□□□□ -1.88
CD47-203ENST00000398258 STK31Q9BXU1 1019 aa3.28□□□□□ -1.88
CD47-203ENST00000398258 MAGEB5Q9BZ81 275 aa3.28□□□□□ -1.88
CD47-203ENST00000398258 TRIM5Q9C035 493 aa3.28□□□□□ -1.88
CD47-203ENST00000398258 GALNT9Q9HCQ5 603 aa3.28□□□□□ -1.88
CD47-203ENST00000398258 RGL1Q9NZL6 768 aa3.28□□□□□ -1.88
CD47-203ENST00000398258 PGAP2Q9UHJ9 254 aa3.28□□□□□ -1.88
CD47-203ENST00000398258 SLC39A10Q9ULF5 831 aa3.28□□□□□ -1.88
CD47-203ENST00000398258 RAD54BQ9Y620 910 aa3.28□□□□□ -1.88
CD47-203ENST00000398258 FAM234BA2RU67 622 aa3.27□□□□□ -1.89
CD47-203ENST00000398258 AQP7P3A6NL99 342 aa3.27□□□□□ -1.89
CD47-203ENST00000398258 SYT5O00445 386 aa3.27□□□□□ -1.89
CD47-203ENST00000398258 TOR1BO14657 336 aa3.27□□□□□ -1.89
CD47-203ENST00000398258 RRP9O43818 475 aaKnown RBP3.27□□□□□ -1.89
CD47-203ENST00000398258 NBNO60934 754 aa3.27□□□□□ -1.89
CD47-203ENST00000398258 VPS4BO75351 444 aa3.27□□□□□ -1.89
CD47-203ENST00000398258 SKAP2O75563 359 aaPredicted RBP3.27□□□□□ -1.89
CD47-203ENST00000398258 ITGA5P08648 1049 aa3.27□□□□□ -1.89
CD47-203ENST00000398258 VEGFAP15692 232 aaPredicted RBP3.27□□□□□ -1.89
CD47-203ENST00000398258 CHRM3P20309 590 aa3.27□□□□□ -1.89
CD47-203ENST00000398258 KCNA3P22001 575 aa3.27□□□□□ -1.89
CD47-203ENST00000398258 SERPINF1P36955 418 aa3.27□□□□□ -1.89
CD47-203ENST00000398258 VAV2P52735 878 aa3.27□□□□□ -1.89
CD47-203ENST00000398258 SPARCL1Q14515 664 aa3.27□□□□□ -1.89
CD47-203ENST00000398258 RAB30Q15771 203 aa3.27□□□□□ -1.89
CD47-203ENST00000398258 MAPKAPK3Q16644 382 aa3.27□□□□□ -1.89
CD47-203ENST00000398258 PFKFB4Q16877 469 aa3.27□□□□□ -1.89
CD47-203ENST00000398258 SLC5A9Q2M3M2 681 aa3.27□□□□□ -1.89
CD47-203ENST00000398258 ZNF750Q32MQ0 723 aa3.27□□□□□ -1.89
CD47-203ENST00000398258 ZIK1Q3SY52 487 aaPredicted RBP3.27□□□□□ -1.89
CD47-203ENST00000398258 MGAT5BQ3V5L5 792 aa3.27□□□□□ -1.89
CD47-203ENST00000398258 CD300EQ496F6 205 aaPredicted RBP3.27□□□□□ -1.89
CD47-203ENST00000398258 PREPLQ4J6C6 727 aaPredicted RBP3.27□□□□□ -1.89
CD47-203ENST00000398258 ANO1Q5XXA6 986 aa3.27□□□□□ -1.89
CD47-203ENST00000398258 ARL6IP4Q66PJ3 421 aaKnown RBP3.27□□□□□ -1.89
CD47-203ENST00000398258 TANGO2Q6ICL3 276 aa3.27□□□□□ -1.89
CD47-203ENST00000398258 SLC30A10Q6XR72 485 aa3.27□□□□□ -1.89
CD47-203ENST00000398258 ZNF517Q6ZMY9 492 aaPredicted RBP3.27□□□□□ -1.89
CD47-203ENST00000398258 CLNKQ7Z7G1 428 aa3.27□□□□□ -1.89
CD47-203ENST00000398258 TXLNBQ8N3L3 684 aa3.27□□□□□ -1.89
CD47-203ENST00000398258 MPP5Q8N3R9 675 aa3.27□□□□□ -1.89
CD47-203ENST00000398258 ANKRD42Q8N9B4 389 aa3.27□□□□□ -1.89
CD47-203ENST00000398258 SPATA5Q8NB90 893 aa3.27□□□□□ -1.89
CD47-203ENST00000398258 MYRIPQ8NFW9 859 aa3.27□□□□□ -1.89
CD47-203ENST00000398258 FAM71BQ8TC56 605 aa3.27□□□□□ -1.89
CD47-203ENST00000398258 PPM1EQ8WY54 764 aa3.27□□□□□ -1.89
CD47-203ENST00000398258 C18orf8Q96DM3 657 aa3.27□□□□□ -1.89
CD47-203ENST00000398258 PTCD3Q96EY7 689 aaKnown RBP3.27□□□□□ -1.89
CD47-203ENST00000398258 ZDHHC12Q96GR4 267 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms