RNA–Protein interactions for RNA: ENST00000398193.8

RGPD1-201, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RGPD1, Length 5,425 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-201ENST00000398193 PPIL6Q8IXY8 311 aa7.72□□□□□ -1.17
RGPD1-201ENST00000398193 SMARCD1Q96GM5 515 aa7.72□□□□□ -1.17
RGPD1-201ENST00000398193 CAPNS2Q96L46 248 aa7.72□□□□□ -1.17
RGPD1-201ENST00000398193 CEP295NLQ96MC4 621 aa7.72□□□□□ -1.17
RGPD1-201ENST00000398193 STAP1Q9ULZ2 295 aa7.72□□□□□ -1.17
RGPD1-201ENST00000398193 POLR3GO15318 223 aaPredicted RBP7.72□□□□□ -1.17
RGPD1-201ENST00000398193 SPAG6O75602 509 aa7.72□□□□□ -1.17
RGPD1-201ENST00000398193 MATKP42679 507 aa7.72□□□□□ -1.17
RGPD1-201ENST00000398193 ACLYP53396 1101 aa7.72□□□□□ -1.17
RGPD1-201ENST00000398193 PDE4CQ08493 712 aa7.72□□□□□ -1.17
RGPD1-201ENST00000398193 DPYSL3Q14195 570 aa7.72□□□□□ -1.17
RGPD1-201ENST00000398193 KRT81Q14533 505 aa7.72□□□□□ -1.17
RGPD1-201ENST00000398193 SLC25A52Q3SY17 297 aa7.72□□□□□ -1.17
RGPD1-201ENST00000398193 INTS6LQ5JSJ4 861 aaKnown RBP7.72□□□□□ -1.17
RGPD1-201ENST00000398193 CEP85LQ5SZL2 805 aa7.72□□□□□ -1.17
RGPD1-201ENST00000398193 PMF1Q6P1K2 205 aa7.72□□□□□ -1.17
RGPD1-201ENST00000398193 TAOK1Q7L7X3 1001 aa7.72□□□□□ -1.17
RGPD1-201ENST00000398193 CPNE8Q86YQ8 564 aa7.72□□□□□ -1.17
RGPD1-201ENST00000398193 MYCBPAPQ8TBZ2 947 aa7.72□□□□□ -1.17
RGPD1-201ENST00000398193 RAPGEF5Q92565 580 aa7.72□□□□□ -1.17
RGPD1-201ENST00000398193 CNGB3Q9NQW8 809 aa7.72□□□□□ -1.17
RGPD1-201ENST00000398193 RNF186Q9NXI6 227 aa7.72□□□□□ -1.17
RGPD1-201ENST00000398193 NME7Q9Y5B8 376 aa7.72□□□□□ -1.17
RGPD1-201ENST00000398193 TANC1Q9C0D5 1861 aa7.72□□□□□ -1.17
RGPD1-201ENST00000398193 PPEF2O14830 753 aa7.72□□□□□ -1.17
RGPD1-201ENST00000398193 SPTLC1O15269 473 aa7.72□□□□□ -1.17
RGPD1-201ENST00000398193 CYP2C18P33260 490 aa7.72□□□□□ -1.17
RGPD1-201ENST00000398193 NOS2P35228 1153 aa7.72□□□□□ -1.17
RGPD1-201ENST00000398193 ITGA8P53708 1063 aa7.72□□□□□ -1.17
RGPD1-201ENST00000398193 MRPS5P82675 430 aaKnown RBP7.72□□□□□ -1.17
RGPD1-201ENST00000398193 SOX4Q06945 474 aaPredicted RBP7.72□□□□□ -1.17
RGPD1-201ENST00000398193 SCAPQ12770 1279 aa7.72□□□□□ -1.17
RGPD1-201ENST00000398193 ANKRD20A8PQ5CZ79 823 aa7.72□□□□□ -1.17
RGPD1-201ENST00000398193 ZC3H12AQ5D1E8 599 aaKnown RBP7.72□□□□□ -1.17
RGPD1-201ENST00000398193 CXCL17Q6UXB2 119 aa7.72□□□□□ -1.17
RGPD1-201ENST00000398193 CYP4V2Q6ZWL3 525 aaPredicted RBP7.72□□□□□ -1.17
RGPD1-201ENST00000398193 GSTA5Q7RTV2 222 aa7.72□□□□□ -1.17
RGPD1-201ENST00000398193 SUSD3Q96L08 255 aa7.72□□□□□ -1.17
RGPD1-201ENST00000398193 RNF157Q96PX1 679 aa7.72□□□□□ -1.17
RGPD1-201ENST00000398193 EPB41L4BQ9H329 900 aa7.72□□□□□ -1.17
RGPD1-201ENST00000398193 GGA2Q9UJY4 613 aa7.72□□□□□ -1.17
RGPD1-201ENST00000398193 CHADO15335 359 aa7.71□□□□□ -1.17
RGPD1-201ENST00000398193 PAPSS1O43252 624 aaPredicted RBP7.71□□□□□ -1.17
RGPD1-201ENST00000398193 HOXA2O43364 376 aa7.71□□□□□ -1.17
RGPD1-201ENST00000398193 FKTNO75072 461 aa7.71□□□□□ -1.17
RGPD1-201ENST00000398193 FAM200BP0CF97 657 aa7.71□□□□□ -1.17
RGPD1-201ENST00000398193 APLP1P51693 650 aa7.71□□□□□ -1.17
RGPD1-201ENST00000398193 ROR1Q01973 937 aa7.71□□□□□ -1.17
RGPD1-201ENST00000398193 IFFO1Q0D2I5 559 aa7.71□□□□□ -1.17
RGPD1-201ENST00000398193 SMARCB1Q12824 385 aa7.71□□□□□ -1.17
RGPD1-201ENST00000398193 TUSC3Q13454 348 aa7.71□□□□□ -1.17
RGPD1-201ENST00000398193 IZUMO3Q5VZ72 239 aa7.71□□□□□ -1.17
RGPD1-201ENST00000398193 OSTM1Q86WC4 334 aa7.71□□□□□ -1.17
RGPD1-201ENST00000398193 RNF25Q96BH1 459 aaPredicted RBP7.71□□□□□ -1.17
RGPD1-201ENST00000398193 IL1R2P27930 398 aa7.71□□□□□ -1.18
RGPD1-201ENST00000398193 THPOP40225 353 aa7.71□□□□□ -1.18
RGPD1-201ENST00000398193 EFHC2Q5JST6 749 aa7.71□□□□□ -1.18
RGPD1-201ENST00000398193 PAXIP1Q6ZW49 1069 aaPredicted RBP7.71□□□□□ -1.18
RGPD1-201ENST00000398193 DDX42Q86XP3 938 aaKnown RBP eCLIP7.71□□□□□ -1.18
RGPD1-201ENST00000398193 ECHDC2Q86YB7 292 aa7.71□□□□□ -1.18
RGPD1-201ENST00000398193 SENP8Q96LD8 212 aa7.71□□□□□ -1.18
RGPD1-201ENST00000398193 FERMT1Q9BQL6 677 aa7.71□□□□□ -1.18
RGPD1-201ENST00000398193 TMEM175Q9BSA9 504 aa7.71□□□□□ -1.18
RGPD1-201ENST00000398193 CAPS2Q9BXY5 557 aa7.71□□□□□ -1.18
RGPD1-201ENST00000398193 FZD10Q9ULW2 581 aa7.71□□□□□ -1.18
RGPD1-201ENST00000398193 PADI3Q9ULW8 664 aa7.71□□□□□ -1.18
RGPD1-201ENST00000398193 FARP1Q9Y4F1 1045 aaPredicted RBP7.71□□□□□ -1.18
RGPD1-201ENST00000398193 CLUHO75153 1309 aa7.71□□□□□ -1.18
RGPD1-201ENST00000398193 F9P00740 461 aa7.71□□□□□ -1.18
RGPD1-201ENST00000398193 NR1D1P20393 614 aa7.71□□□□□ -1.18
RGPD1-201ENST00000398193 ACTN2P35609 894 aa7.71□□□□□ -1.18
RGPD1-201ENST00000398193 BFSP2Q13515 415 aa7.71□□□□□ -1.18
RGPD1-201ENST00000398193 PDZD4Q76G19 769 aaPredicted RBP7.71□□□□□ -1.18
RGPD1-201ENST00000398193 ANKS1BQ7Z6G8 1248 aa7.71□□□□□ -1.18
RGPD1-201ENST00000398193 FBXO25Q8TCJ0 367 aa7.71□□□□□ -1.18
RGPD1-201ENST00000398193 KHSRPQ92945 711 aaKnown RBP eCLIP7.71□□□□□ -1.18
RGPD1-201ENST00000398193 PKMYT1Q99640 499 aa7.71□□□□□ -1.18
RGPD1-201ENST00000398193 SYT15Q9BQS2 421 aa7.71□□□□□ -1.18
RGPD1-201ENST00000398193 PAK5Q9P286 719 aa7.71□□□□□ -1.18
RGPD1-201ENST00000398193 R3HDM2Q9Y2K5 976 aaKnown RBP7.71□□□□□ -1.18
RGPD1-201ENST00000398193 A0A087WUV0 522 aaPredicted RBP7.71□□□□□ -1.18
RGPD1-201ENST00000398193 SYN3O14994 580 aa7.71□□□□□ -1.18
RGPD1-201ENST00000398193 TTC4O95801 387 aa7.71□□□□□ -1.18
RGPD1-201ENST00000398193 SLC18A1P54219 525 aa7.71□□□□□ -1.18
RGPD1-201ENST00000398193 RNASEH2BQ5TBB1 312 aaKnown RBP7.71□□□□□ -1.18
RGPD1-201ENST00000398193 ZNF449Q6P9G9 518 aa7.71□□□□□ -1.18
RGPD1-201ENST00000398193 AGMOQ6ZNB7 445 aa7.71□□□□□ -1.18
RGPD1-201ENST00000398193 FAM172AQ8WUF8 416 aa7.71□□□□□ -1.18
RGPD1-201ENST00000398193 RSAD2Q8WXG1 361 aa7.71□□□□□ -1.18
RGPD1-201ENST00000398193 P3H4Q92791 437 aa7.71□□□□□ -1.18
RGPD1-201ENST00000398193 APOL6Q9BWW8 343 aa7.71□□□□□ -1.18
RGPD1-201ENST00000398193 ARHGAP39Q9C0H5 1083 aa7.71□□□□□ -1.18
RGPD1-201ENST00000398193 RNF39Q9H2S5 420 aa7.71□□□□□ -1.18
RGPD1-201ENST00000398193 ZWILCHQ9H900 591 aa7.71□□□□□ -1.18
RGPD1-201ENST00000398193 SSU72Q9NP77 194 aaKnown RBP7.71□□□□□ -1.18
RGPD1-201ENST00000398193 FNIP2Q9P278 1114 aa7.71□□□□□ -1.18
RGPD1-201ENST00000398193 SSTR3P32745 418 aaPredicted RBP7.7□□□□□ -1.18
RGPD1-201ENST00000398193 PHBP35232 272 aa7.7□□□□□ -1.18
RGPD1-201ENST00000398193 TRADDQ15628 312 aa7.7□□□□□ -1.18
RGPD1-201ENST00000398193 LLGL2Q6P1M3 1020 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms