RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 EFEMP2O95967 443 aa20.29■□□□□ 0.84
PDLIM2-204ENST00000397760 MAP3K7CLP57077 242 aa20.29■□□□□ 0.84
PDLIM2-204ENST00000397760 PTPROQ16827 1216 aa20.29■□□□□ 0.84
PDLIM2-204ENST00000397760 SLC39A12Q504Y0 691 aa20.29■□□□□ 0.84
PDLIM2-204ENST00000397760 RTP2Q5QGT7 225 aa20.29■□□□□ 0.84
PDLIM2-204ENST00000397760 OR6B2Q6IFH4 312 aa20.29■□□□□ 0.84
PDLIM2-204ENST00000397760 MCRS1Q96EZ8 462 aa20.29■□□□□ 0.84
PDLIM2-204ENST00000397760 HES6Q96HZ4 224 aa20.29■□□□□ 0.84
PDLIM2-204ENST00000397760 SLC9A7Q96T83 725 aa20.29■□□□□ 0.84
PDLIM2-204ENST00000397760 SPG21Q9NZD8 308 aa20.29■□□□□ 0.84
PDLIM2-204ENST00000397760 PACSIN2Q9UNF0 486 aaPredicted RBP20.29■□□□□ 0.84
PDLIM2-204ENST00000397760 ALG6Q9Y672 507 aa20.29■□□□□ 0.84
PDLIM2-204ENST00000397760 OR6C75A6NL08 312 aa20.28■□□□□ 0.84
PDLIM2-204ENST00000397760 H7C4K7 107 aa20.28■□□□□ 0.84
PDLIM2-204ENST00000397760 GABBR2O75899 941 aa20.28■□□□□ 0.84
PDLIM2-204ENST00000397760 BDNFP23560 247 aa20.28■□□□□ 0.84
PDLIM2-204ENST00000397760 ACADSBP45954 432 aa20.28■□□□□ 0.84
PDLIM2-204ENST00000397760 RPL7AP62424 266 aaKnown RBP20.28■□□□□ 0.84
PDLIM2-204ENST00000397760 TAP1Q03518 808 aa20.28■□□□□ 0.84
PDLIM2-204ENST00000397760 USP41Q3LFD5 358 aa20.28■□□□□ 0.84
PDLIM2-204ENST00000397760 DNAJC21Q5F1R6 531 aaKnown RBP20.28■□□□□ 0.84
PDLIM2-204ENST00000397760 PPP1R15BQ5SWA1 713 aa20.28■□□□□ 0.84
PDLIM2-204ENST00000397760 DCUN1D2Q6PH85 259 aa20.28■□□□□ 0.84
PDLIM2-204ENST00000397760 C4orf50Q6ZRC1 276 aa20.28■□□□□ 0.84
PDLIM2-204ENST00000397760 FAM183BPQ6ZVS7 135 aa20.28■□□□□ 0.84
PDLIM2-204ENST00000397760 ANKS3Q6ZW76 656 aa20.28■□□□□ 0.84
PDLIM2-204ENST00000397760 PIGZQ86VD9 579 aa20.28■□□□□ 0.84
PDLIM2-204ENST00000397760 HERC6Q8IVU3 1022 aa20.28■□□□□ 0.84
PDLIM2-204ENST00000397760 FIBCD1Q8N539 461 aa20.28■□□□□ 0.84
PDLIM2-204ENST00000397760 PHOSPHO2Q8TCD6 241 aa20.28■□□□□ 0.84
PDLIM2-204ENST00000397760 SMARCD1Q96GM5 515 aa20.28■□□□□ 0.84
PDLIM2-204ENST00000397760 TMEM169Q96HH4 297 aa20.28■□□□□ 0.84
PDLIM2-204ENST00000397760 MCEEQ96PE7 176 aa20.28■□□□□ 0.84
PDLIM2-204ENST00000397760 SMOQ99835 787 aa20.28■□□□□ 0.84
PDLIM2-204ENST00000397760 VN1R3Q9BXE9 311 aa20.28■□□□□ 0.84
PDLIM2-204ENST00000397760 RHOBTB2Q9BYZ6 727 aa20.28■□□□□ 0.84
PDLIM2-204ENST00000397760 MTIF3Q9H2K0 278 aaKnown RBP20.28■□□□□ 0.84
PDLIM2-204ENST00000397760 CYLDQ9NQC7 956 aa20.28■□□□□ 0.84
PDLIM2-204ENST00000397760 AMFRQ9UKV5 643 aa20.28■□□□□ 0.84
PDLIM2-204ENST00000397760 TMEM191CA6NGB0 347 aa20.27■□□□□ 0.84
PDLIM2-204ENST00000397760 SIGLEC16A6NMB1 481 aa20.27■□□□□ 0.84
PDLIM2-204ENST00000397760 CEP104O60308 925 aa20.27■□□□□ 0.84
PDLIM2-204ENST00000397760 KRT3P12035 628 aa20.27■□□□□ 0.84
PDLIM2-204ENST00000397760 ATP2A2P16615 1042 aaKnown RBP20.27■□□□□ 0.84
PDLIM2-204ENST00000397760 RPL34P49207 117 aaKnown RBP20.27■□□□□ 0.84
PDLIM2-204ENST00000397760 CACNA2D1P54289 1103 aa20.27■□□□□ 0.84
PDLIM2-204ENST00000397760 NT5DC3Q86UY8 548 aa20.27■□□□□ 0.84
PDLIM2-204ENST00000397760 SPATA2LQ8IUW3 424 aaPredicted RBP20.27■□□□□ 0.84
PDLIM2-204ENST00000397760 RNF168Q8IYW5 571 aaPredicted RBP20.27■□□□□ 0.84
PDLIM2-204ENST00000397760 IFT81Q8WYA0 676 aa20.27■□□□□ 0.84
PDLIM2-204ENST00000397760 LRRC45Q96CN5 670 aa20.27■□□□□ 0.84
PDLIM2-204ENST00000397760 EIF3HO15372 352 aaKnown RBP eCLIP20.27■□□□□ 0.84
PDLIM2-204ENST00000397760 LCP1P13796 627 aa20.27■□□□□ 0.84
PDLIM2-204ENST00000397760 TTMPQ5BVD1 217 aa20.27■□□□□ 0.84
PDLIM2-204ENST00000397760 FAM102AQ5T9C2 384 aaPredicted RBP20.27■□□□□ 0.84
PDLIM2-204ENST00000397760 MAATS1Q7Z4T9 603 aa20.27■□□□□ 0.84
PDLIM2-204ENST00000397760 SCUBE3Q8IX30 993 aa20.27■□□□□ 0.84
PDLIM2-204ENST00000397760 CCDC26Q8TAB7 109 aa20.27■□□□□ 0.84
PDLIM2-204ENST00000397760 KCNK16Q96T55 309 aa20.27■□□□□ 0.84
PDLIM2-204ENST00000397760 RAD9AQ99638 391 aa20.27■□□□□ 0.84
PDLIM2-204ENST00000397760 HINFPQ9BQA5 517 aa20.27■□□□□ 0.84
PDLIM2-204ENST00000397760 AAASQ9NRG9 546 aa20.27■□□□□ 0.84
PDLIM2-204ENST00000397760 TMEM30AQ9NV96 361 aa20.27■□□□□ 0.84
PDLIM2-204ENST00000397760 FEZ2Q9UHY8 353 aaPredicted RBP20.27■□□□□ 0.84
PDLIM2-204ENST00000397760 SRRM3A6NNA2 597 aaPredicted RBP20.26■□□□□ 0.83
PDLIM2-204ENST00000397760 HMGB1P1B2RPK0 211 aaPredicted RBP20.26■□□□□ 0.83
PDLIM2-204ENST00000397760 PAPSS1O43252 624 aaPredicted RBP20.26■□□□□ 0.83
PDLIM2-204ENST00000397760 TBC1D4O60343 1298 aa20.26■□□□□ 0.83
PDLIM2-204ENST00000397760 COMTP21964 271 aa20.26■□□□□ 0.83
PDLIM2-204ENST00000397760 MRPS25P82663 173 aaKnown RBP20.26■□□□□ 0.83
PDLIM2-204ENST00000397760 KIAA1841Q6NSI8 718 aa20.26■□□□□ 0.83
PDLIM2-204ENST00000397760 KDM7AQ6ZMT4 941 aa20.26■□□□□ 0.83
PDLIM2-204ENST00000397760 ZDHHC17Q8IUH5 632 aa20.26■□□□□ 0.83
PDLIM2-204ENST00000397760 ZMIZ2Q8NF64 920 aa20.26■□□□□ 0.83
PDLIM2-204ENST00000397760 KCTD13Q8WZ19 329 aa20.26■□□□□ 0.83
PDLIM2-204ENST00000397760 SEC14L1Q92503 715 aa20.26■□□□□ 0.83
PDLIM2-204ENST00000397760 NAP1L3Q99457 506 aaPredicted RBP20.26■□□□□ 0.83
PDLIM2-204ENST00000397760 OXCT2Q9BYC2 517 aaPredicted RBP20.26■□□□□ 0.83
PDLIM2-204ENST00000397760 CSNK1G1Q9HCP0 422 aa20.26■□□□□ 0.83
PDLIM2-204ENST00000397760 METTL5Q9NRN9 209 aaKnown RBP20.26■□□□□ 0.83
PDLIM2-204ENST00000397760 TLL1O43897 1013 aa20.25■□□□□ 0.83
PDLIM2-204ENST00000397760 SOD2P04179 222 aa20.25■□□□□ 0.83
PDLIM2-204ENST00000397760 FAM153BP0C7A2 387 aa20.25■□□□□ 0.83
PDLIM2-204ENST00000397760 RFC1P35251 1148 aaPredicted RBP20.25■□□□□ 0.83
PDLIM2-204ENST00000397760 RABGGTBP53611 331 aa20.25■□□□□ 0.83
PDLIM2-204ENST00000397760 ARPP19P56211 112 aa20.25■□□□□ 0.83
PDLIM2-204ENST00000397760 NFE2Q16621 373 aaPredicted RBP20.25■□□□□ 0.83
PDLIM2-204ENST00000397760 FAM153CQ494X1 144 aa20.25■□□□□ 0.83
PDLIM2-204ENST00000397760 PRSS55Q6UWB4 352 aaPredicted RBP20.25■□□□□ 0.83
PDLIM2-204ENST00000397760 OLFML1Q6UWY5 402 aa20.25■□□□□ 0.83
PDLIM2-204ENST00000397760 JOSD2Q8TAC2 188 aa20.25■□□□□ 0.83
PDLIM2-204ENST00000397760 PIK3R5Q8WYR1 880 aa20.25■□□□□ 0.83
PDLIM2-204ENST00000397760 RASSF4Q9H2L5 321 aa20.25■□□□□ 0.83
PDLIM2-204ENST00000397760 LRRC4Q9HBW1 653 aa20.25■□□□□ 0.83
PDLIM2-204ENST00000397760 CHST7Q9NS84 486 aa20.25■□□□□ 0.83
PDLIM2-204ENST00000397760 FAM153AQ9UHL3 310 aa20.25■□□□□ 0.83
PDLIM2-204ENST00000397760 PCDHB12Q9Y5F1 795 aa20.25■□□□□ 0.83
PDLIM2-204ENST00000397760 SART1O43290 800 aaKnown RBP20.25■□□□□ 0.83
PDLIM2-204ENST00000397760 PROSCO94903 275 aa20.25■□□□□ 0.83
PDLIM2-204ENST00000397760 PPM1AP35813 382 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms