RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 FESP07332 822 aa5.67□□□□□ -1.5
PTPRD-205ENST00000397611 MMP10P09238 476 aa5.67□□□□□ -1.5
PTPRD-205ENST00000397611 MYCLP12524 364 aaPredicted RBP5.67□□□□□ -1.5
PTPRD-205ENST00000397611 TBL3Q12788 808 aaKnown RBP5.67□□□□□ -1.5
PTPRD-205ENST00000397611 GPS1Q13098 491 aa5.67□□□□□ -1.5
PTPRD-205ENST00000397611 HIF1AQ16665 826 aa5.67□□□□□ -1.5
PTPRD-205ENST00000397611 P3H1Q32P28 736 aa5.67□□□□□ -1.5
PTPRD-205ENST00000397611 AAGABQ6PD74 315 aa5.67□□□□□ -1.5
PTPRD-205ENST00000397611 FAM13CQ8NE31 585 aa5.67□□□□□ -1.5
PTPRD-205ENST00000397611 FAF2Q96CS3 445 aa5.67□□□□□ -1.5
PTPRD-205ENST00000397611 BTBD6Q96KE9 485 aa5.67□□□□□ -1.5
PTPRD-205ENST00000397611 KCNK4Q9NYG8 393 aa5.67□□□□□ -1.5
PTPRD-205ENST00000397611 UTP6Q9NYH9 597 aaKnown RBP5.67□□□□□ -1.5
PTPRD-205ENST00000397611 BTBD7Q9P203 1132 aa5.67□□□□□ -1.5
PTPRD-205ENST00000397611 TMA7Q9Y2S6 64 aaKnown RBP5.67□□□□□ -1.5
PTPRD-205ENST00000397611 A8MUI8 341 aa5.67□□□□□ -1.5
PTPRD-205ENST00000397611 HNRNPRO43390 633 aaKnown RBP5.67□□□□□ -1.5
PTPRD-205ENST00000397611 SGPL1O95470 568 aa5.67□□□□□ -1.5
PTPRD-205ENST00000397611 RALAP11233 206 aa5.67□□□□□ -1.5
PTPRD-205ENST00000397611 ETS2P15036 469 aa5.67□□□□□ -1.5
PTPRD-205ENST00000397611 RPS6KA3P51812 740 aa5.67□□□□□ -1.5
PTPRD-205ENST00000397611 ADARP55265 1226 aaKnown RBP5.67□□□□□ -1.5
PTPRD-205ENST00000397611 PEX3P56589 373 aa5.67□□□□□ -1.5
PTPRD-205ENST00000397611 RPS6P62753 249 aaKnown RBP5.67□□□□□ -1.5
PTPRD-205ENST00000397611 KCTD19Q17RG1 926 aaPredicted RBP5.67□□□□□ -1.5
PTPRD-205ENST00000397611 SPRED3Q2MJR0 410 aa5.67□□□□□ -1.5
PTPRD-205ENST00000397611 TFDP3Q5H9I0 405 aa5.67□□□□□ -1.5
PTPRD-205ENST00000397611 PRPF39Q86UA1 669 aaKnown RBP5.67□□□□□ -1.5
PTPRD-205ENST00000397611 WDR49Q8IV35 697 aa5.67□□□□□ -1.5
PTPRD-205ENST00000397611 SLC4A11Q8NBS3 891 aa5.67□□□□□ -1.5
PTPRD-205ENST00000397611 CEP170P1Q96L14 293 aa5.67□□□□□ -1.5
PTPRD-205ENST00000397611 PPP1R36Q96LQ0 422 aa5.67□□□□□ -1.5
PTPRD-205ENST00000397611 CATSPER2Q96P56 530 aa5.67□□□□□ -1.5
PTPRD-205ENST00000397611 CYLDQ9NQC7 956 aa5.67□□□□□ -1.5
PTPRD-205ENST00000397611 KLHL11Q9NVR0 708 aa5.67□□□□□ -1.5
PTPRD-205ENST00000397611 GID8Q9NWU2 228 aa5.67□□□□□ -1.5
PTPRD-205ENST00000397611 ATP11BQ9Y2G3 1177 aa5.67□□□□□ -1.5
PTPRD-205ENST00000397611 hCG_1818297A0A087WSY0 165 aa5.66□□□□□ -1.5
PTPRD-205ENST00000397611 OGTO15294 1046 aa5.66□□□□□ -1.5
PTPRD-205ENST00000397611 ETV4P43268 484 aa5.66□□□□□ -1.5
PTPRD-205ENST00000397611 GEMIN4P57678 1058 aaKnown RBP5.66□□□□□ -1.5
PTPRD-205ENST00000397611 SLC34A1Q06495 639 aa5.66□□□□□ -1.5
PTPRD-205ENST00000397611 TRIM16LQ309B1 348 aa5.66□□□□□ -1.5
PTPRD-205ENST00000397611 SLC26A11Q86WA9 606 aa5.66□□□□□ -1.5
PTPRD-205ENST00000397611 PSTKQ8IV42 348 aaKnown RBP5.66□□□□□ -1.5
PTPRD-205ENST00000397611 CDAN1Q8IWY9 1227 aa5.66□□□□□ -1.5
PTPRD-205ENST00000397611 ACTL9Q8TC94 416 aa5.66□□□□□ -1.5
PTPRD-205ENST00000397611 ACER1Q8TDN7 264 aa5.66□□□□□ -1.5
PTPRD-205ENST00000397611 CLEC4DQ8WXI8 215 aa5.66□□□□□ -1.5
PTPRD-205ENST00000397611 RMDN3Q96TC7 470 aa5.66□□□□□ -1.5
PTPRD-205ENST00000397611 ING2Q9H160 280 aa5.66□□□□□ -1.5
PTPRD-205ENST00000397611 ASB7Q9H672 318 aa5.66□□□□□ -1.5
PTPRD-205ENST00000397611 CNTN3Q9P232 1028 aa5.66□□□□□ -1.5
PTPRD-205ENST00000397611 ZNF70Q9UC06 446 aaPredicted RBP5.66□□□□□ -1.5
PTPRD-205ENST00000397611 PGAP2Q9UHJ9 254 aa5.66□□□□□ -1.5
PTPRD-205ENST00000397611 PNMA3Q9UL41 463 aa5.66□□□□□ -1.5
PTPRD-205ENST00000397611 ZMYND8Q9ULU4 1186 aaPredicted RBP5.66□□□□□ -1.5
PTPRD-205ENST00000397611 AFG3L2Q9Y4W6 797 aa5.66□□□□□ -1.5
PTPRD-205ENST00000397611 ZNF862O60290 1169 aa5.66□□□□□ -1.5
PTPRD-205ENST00000397611 CBX6O95503 412 aa5.66□□□□□ -1.5
PTPRD-205ENST00000397611 ESRRBO95718 433 aa5.66□□□□□ -1.5
PTPRD-205ENST00000397611 CCNE2O96020 404 aa5.66□□□□□ -1.5
PTPRD-205ENST00000397611 KCNA4P22459 653 aa5.66□□□□□ -1.5
PTPRD-205ENST00000397611 TMCO5AQ8N6Q1 288 aa5.66□□□□□ -1.5
PTPRD-205ENST00000397611 SEMA4DQ92854 862 aa5.66□□□□□ -1.5
PTPRD-205ENST00000397611 TRAPPC9Q96Q05 1148 aa5.66□□□□□ -1.5
PTPRD-205ENST00000397611 C11orf70Q9BRQ4 267 aa5.66□□□□□ -1.5
PTPRD-205ENST00000397611 PORCNQ9H237 461 aa5.66□□□□□ -1.5
PTPRD-205ENST00000397611 MANSC1Q9H8J5 431 aa5.66□□□□□ -1.5
PTPRD-205ENST00000397611 CYP26B1Q9NR63 512 aa5.66□□□□□ -1.5
PTPRD-205ENST00000397611 NRBP2Q9NSY0 501 aa5.66□□□□□ -1.5
PTPRD-205ENST00000397611 CHORDC1Q9UHD1 332 aaPredicted RBP5.66□□□□□ -1.5
PTPRD-205ENST00000397611 MID2Q9UJV3 735 aa5.66□□□□□ -1.5
PTPRD-205ENST00000397611 UPP2O95045 317 aa5.66□□□□□ -1.5
PTPRD-205ENST00000397611 HMGCRP04035 888 aa5.66□□□□□ -1.5
PTPRD-205ENST00000397611 CCDC130P13994 396 aa5.66□□□□□ -1.5
PTPRD-205ENST00000397611 ZNF135P52742 658 aaPredicted RBP5.66□□□□□ -1.5
PTPRD-205ENST00000397611 RNF220Q5VTB9 566 aa5.66□□□□□ -1.5
PTPRD-205ENST00000397611 HACE1Q8IYU2 909 aa5.66□□□□□ -1.5
PTPRD-205ENST00000397611 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.66□□□□□ -1.5
PTPRD-205ENST00000397611 DNERQ8NFT8 737 aa5.66□□□□□ -1.5
PTPRD-205ENST00000397611 RNF34Q969K3 372 aa5.66□□□□□ -1.5
PTPRD-205ENST00000397611 CAAP1Q9H8G2 361 aa5.66□□□□□ -1.5
PTPRD-205ENST00000397611 SCHIP1Q9P0W5 487 aaPredicted RBP5.66□□□□□ -1.5
PTPRD-205ENST00000397611 HEY2Q9UBP5 337 aa5.66□□□□□ -1.5
PTPRD-205ENST00000397611 APPL1Q9UKG1 709 aa5.66□□□□□ -1.5
PTPRD-205ENST00000397611 AGO2Q9UKV8 859 aaKnown RBP5.66□□□□□ -1.5
PTPRD-205ENST00000397611 CNTNAP1P78357 1384 aa5.66□□□□□ -1.5
PTPRD-205ENST00000397611 MYH7BA7E2Y1 1941 aa5.66□□□□□ -1.5
PTPRD-205ENST00000397611 MED7O43513 233 aa5.66□□□□□ -1.5
PTPRD-205ENST00000397611 FKBP6O75344 327 aa5.66□□□□□ -1.5
PTPRD-205ENST00000397611 STBD1O95210 358 aa5.66□□□□□ -1.5
PTPRD-205ENST00000397611 KRT8P05787 483 aa5.66□□□□□ -1.5
PTPRD-205ENST00000397611 FAM163BP0C2L3 166 aa5.66□□□□□ -1.5
PTPRD-205ENST00000397611 PYGBP11216 843 aa5.66□□□□□ -1.5
PTPRD-205ENST00000397611 RAP1GDS1P52306 607 aa5.66□□□□□ -1.5
PTPRD-205ENST00000397611 USP4Q13107 963 aa5.66□□□□□ -1.5
PTPRD-205ENST00000397611 TTLL12Q14166 644 aaPredicted RBP5.66□□□□□ -1.5
PTPRD-205ENST00000397611 ZYXQ15942 572 aaKnown RBP5.66□□□□□ -1.5
PTPRD-205ENST00000397611 TRIM74Q86UV6 250 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms