RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 SH3D19Q5HYK7 790 aa10.88□□□□□ -0.67
CPSF1P1-201ENST00000397477 C6orf89Q6UWU4 347 aa10.88□□□□□ -0.67
CPSF1P1-201ENST00000397477 ILDR2Q71H61 639 aa10.88□□□□□ -0.67
CPSF1P1-201ENST00000397477 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.88□□□□□ -0.67
CPSF1P1-201ENST00000397477 PCGF5Q86SE9 256 aa10.88□□□□□ -0.67
CPSF1P1-201ENST00000397477 CENPTQ96BT3 561 aa10.88□□□□□ -0.67
CPSF1P1-201ENST00000397477 MROH8Q9H579 483 aa10.88□□□□□ -0.67
CPSF1P1-201ENST00000397477 MYH9P35579 1960 aaKnown RBP10.88□□□□□ -0.67
CPSF1P1-201ENST00000397477 A0A0G2JLL6 359 aaPredicted RBP10.88□□□□□ -0.67
CPSF1P1-201ENST00000397477 CILPO75339 1184 aa10.88□□□□□ -0.67
CPSF1P1-201ENST00000397477 AMPD1P23109 780 aa10.88□□□□□ -0.67
CPSF1P1-201ENST00000397477 MAP2K2P36507 400 aa10.88□□□□□ -0.67
CPSF1P1-201ENST00000397477 CLDN10P78369 228 aa10.88□□□□□ -0.67
CPSF1P1-201ENST00000397477 TCEAL1Q15170 157 aa10.88□□□□□ -0.67
CPSF1P1-201ENST00000397477 RNASEH2BQ5TBB1 312 aaKnown RBP10.88□□□□□ -0.67
CPSF1P1-201ENST00000397477 MFSD5Q6N075 450 aa10.88□□□□□ -0.67
CPSF1P1-201ENST00000397477 DENND5BQ6ZUT9 1274 aa10.88□□□□□ -0.67
CPSF1P1-201ENST00000397477 PRRT2Q7Z6L0 340 aaPredicted RBP10.88□□□□□ -0.67
CPSF1P1-201ENST00000397477 TRABD2AQ86V40 505 aa10.88□□□□□ -0.67
CPSF1P1-201ENST00000397477 ZNF354CQ86Y25 554 aa10.88□□□□□ -0.67
CPSF1P1-201ENST00000397477 FITM2Q8N6M3 262 aa10.88□□□□□ -0.67
CPSF1P1-201ENST00000397477 MAGEB18Q96M61 343 aa10.88□□□□□ -0.67
CPSF1P1-201ENST00000397477 CYTH2Q99418 400 aa10.88□□□□□ -0.67
CPSF1P1-201ENST00000397477 KLC2Q9H0B6 622 aa10.88□□□□□ -0.67
CPSF1P1-201ENST00000397477 KDM4CQ9H3R0 1056 aa10.88□□□□□ -0.67
CPSF1P1-201ENST00000397477 IFT122Q9HBG6 1241 aa10.88□□□□□ -0.67
CPSF1P1-201ENST00000397477 NOD2Q9HC29 1040 aa10.88□□□□□ -0.67
CPSF1P1-201ENST00000397477 PCMTD2Q9NV79 361 aa10.88□□□□□ -0.67
CPSF1P1-201ENST00000397477 IL1RAPL1Q9NZN1 696 aa10.88□□□□□ -0.67
CPSF1P1-201ENST00000397477 IGKV6D-21A0A0A0MT36 114 aa10.87□□□□□ -0.67
CPSF1P1-201ENST00000397477 F7P08709 466 aaPredicted RBP10.87□□□□□ -0.67
CPSF1P1-201ENST00000397477 PAEPP09466 180 aa10.87□□□□□ -0.67
CPSF1P1-201ENST00000397477 GNL1P36915 607 aaPredicted RBP10.87□□□□□ -0.67
CPSF1P1-201ENST00000397477 ARL4AP40617 200 aa10.87□□□□□ -0.67
CPSF1P1-201ENST00000397477 COPS2P61201 443 aa10.87□□□□□ -0.67
CPSF1P1-201ENST00000397477 TMPRSS15P98073 1019 aa10.87□□□□□ -0.67
CPSF1P1-201ENST00000397477 ZNF484Q5JVG2 852 aa10.87□□□□□ -0.67
CPSF1P1-201ENST00000397477 KDELC2Q7Z4H8 507 aa10.87□□□□□ -0.67
CPSF1P1-201ENST00000397477 LRRC6Q86X45 466 aa10.87□□□□□ -0.67
CPSF1P1-201ENST00000397477 VPS52Q8N1B4 723 aa10.87□□□□□ -0.67
CPSF1P1-201ENST00000397477 ARFGAP1Q8N6T3 406 aa10.87□□□□□ -0.67
CPSF1P1-201ENST00000397477 AGR3Q8TD06 166 aa10.87□□□□□ -0.67
CPSF1P1-201ENST00000397477 CDHR5Q9HBB8 845 aa10.87□□□□□ -0.67
CPSF1P1-201ENST00000397477 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.87□□□□□ -0.67
CPSF1P1-201ENST00000397477 SPDYE5A6NIY4 337 aa10.87□□□□□ -0.67
CPSF1P1-201ENST00000397477 ZBTB42B2RXF5 422 aa10.87□□□□□ -0.67
CPSF1P1-201ENST00000397477 CLDN5O00501 218 aa10.87□□□□□ -0.67
CPSF1P1-201ENST00000397477 TP73O15350 636 aa10.87□□□□□ -0.67
CPSF1P1-201ENST00000397477 HUS1O60921 280 aa10.87□□□□□ -0.67
CPSF1P1-201ENST00000397477 RECQL4O94761 1208 aa10.87□□□□□ -0.67
CPSF1P1-201ENST00000397477 MCF2P10911 925 aa10.87□□□□□ -0.67
CPSF1P1-201ENST00000397477 TFE3P19532 575 aaPredicted RBP10.87□□□□□ -0.67
CPSF1P1-201ENST00000397477 TAC1P20366 129 aa10.87□□□□□ -0.67
CPSF1P1-201ENST00000397477 PDE1BQ01064 536 aa10.87□□□□□ -0.67
CPSF1P1-201ENST00000397477 ZNF268Q14587 947 aaPredicted RBP10.87□□□□□ -0.67
CPSF1P1-201ENST00000397477 KLHL38Q2WGJ6 581 aa10.87□□□□□ -0.67
CPSF1P1-201ENST00000397477 MTHFD1LQ6UB35 978 aa10.87□□□□□ -0.67
CPSF1P1-201ENST00000397477 ARMC2Q8NEN0 867 aa10.87□□□□□ -0.67
CPSF1P1-201ENST00000397477 SLC2A14Q8TDB8 520 aa10.87□□□□□ -0.67
CPSF1P1-201ENST00000397477 DEPDC1BQ8WUY9 529 aa10.87□□□□□ -0.67
CPSF1P1-201ENST00000397477 PEBP4Q96S96 227 aa10.87□□□□□ -0.67
CPSF1P1-201ENST00000397477 SPON1Q9HCB6 807 aa10.87□□□□□ -0.67
CPSF1P1-201ENST00000397477 INPP5FQ9Y2H2 1132 aa10.87□□□□□ -0.67
CPSF1P1-201ENST00000397477 IQANK1A0A1B0GTG1 560 aa10.87□□□□□ -0.67
CPSF1P1-201ENST00000397477 CDC25CP30307 473 aa10.87□□□□□ -0.67
CPSF1P1-201ENST00000397477 ITIH4Q14624 930 aa10.87□□□□□ -0.67
CPSF1P1-201ENST00000397477 NOL9Q5SY16 702 aaKnown RBP10.87□□□□□ -0.67
CPSF1P1-201ENST00000397477 HEATR6Q6AI08 1181 aaKnown RBP10.87□□□□□ -0.67
CPSF1P1-201ENST00000397477 BBS12Q6ZW61 710 aa10.87□□□□□ -0.67
CPSF1P1-201ENST00000397477 YTHDF3Q7Z739 585 aaKnown RBP10.87□□□□□ -0.67
CPSF1P1-201ENST00000397477 SIX6OS1Q8N1H7 587 aa10.87□□□□□ -0.67
CPSF1P1-201ENST00000397477 DNAAF3Q8N9W5 541 aa10.87□□□□□ -0.67
CPSF1P1-201ENST00000397477 MCUR1Q96AQ8 359 aa10.87□□□□□ -0.67
CPSF1P1-201ENST00000397477 SNRNP25Q9BV90 132 aaKnown RBP10.87□□□□□ -0.67
CPSF1P1-201ENST00000397477 ZFP69BQ9UJL9 534 aa10.87□□□□□ -0.67
CPSF1P1-201ENST00000397477 G3BP2Q9UN86 482 aaKnown RBP10.87□□□□□ -0.67
CPSF1P1-201ENST00000397477 SHOC2Q9UQ13 582 aa10.87□□□□□ -0.67
CPSF1P1-201ENST00000397477 DOCK5Q9H7D0 1870 aa10.86□□□□□ -0.67
CPSF1P1-201ENST00000397477 I3L4J1 428 aa10.86□□□□□ -0.67
CPSF1P1-201ENST00000397477 APOC4-APOC2K7ER74 178 aa10.86□□□□□ -0.67
CPSF1P1-201ENST00000397477 CNMDO75829 334 aa10.86□□□□□ -0.67
CPSF1P1-201ENST00000397477 APOC2P02655 101 aa10.86□□□□□ -0.67
CPSF1P1-201ENST00000397477 BGNP21810 368 aa10.86□□□□□ -0.67
CPSF1P1-201ENST00000397477 GPD2P43304 727 aa10.86□□□□□ -0.67
CPSF1P1-201ENST00000397477 ABCG1P45844 678 aa10.86□□□□□ -0.67
CPSF1P1-201ENST00000397477 ZNF132P52740 706 aa10.86□□□□□ -0.67
CPSF1P1-201ENST00000397477 CLNS1AP54105 237 aaKnown RBP10.86□□□□□ -0.67
CPSF1P1-201ENST00000397477 ELF3P78545 371 aaPredicted RBP10.86□□□□□ -0.67
CPSF1P1-201ENST00000397477 MTDHQ86UE4 582 aaKnown RBP10.86□□□□□ -0.67
CPSF1P1-201ENST00000397477 PYROXD2Q8N2H3 581 aa10.86□□□□□ -0.67
CPSF1P1-201ENST00000397477 HASPINQ8TF76 798 aa10.86□□□□□ -0.67
CPSF1P1-201ENST00000397477 APOL2Q9BQE5 337 aa10.86□□□□□ -0.67
CPSF1P1-201ENST00000397477 MYLK2Q9H1R3 596 aa10.86□□□□□ -0.67
CPSF1P1-201ENST00000397477 TMPRSS4Q9NRS4 437 aa10.86□□□□□ -0.67
CPSF1P1-201ENST00000397477 USP12O75317 370 aa10.86□□□□□ -0.67
CPSF1P1-201ENST00000397477 ITGAVP06756 1048 aa10.86□□□□□ -0.67
CPSF1P1-201ENST00000397477 CYP2F1P24903 491 aa10.86□□□□□ -0.67
CPSF1P1-201ENST00000397477 LMO2P25791 158 aa10.86□□□□□ -0.67
CPSF1P1-201ENST00000397477 SULT1E1P49888 294 aa10.86□□□□□ -0.67
CPSF1P1-201ENST00000397477 GBE1Q04446 702 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms