RNA–Protein interactions for RNA: ENST00000397404.5

TSPAN4-204, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-204ENST00000397404 IRAK3Q9Y616 596 aa19.94■□□□□ 0.78
TSPAN4-204ENST00000397404 CDY1Q9Y6F8 540 aa19.94■□□□□ 0.78
TSPAN4-204ENST00000397404 PATJQ8NI35 1801 aa19.94■□□□□ 0.78
TSPAN4-204ENST00000397404 CTAGE15A4D2H0 777 aa19.93■□□□□ 0.78
TSPAN4-204ENST00000397404 TMEM110-MUSTN1A8MSY1 372 aa19.93■□□□□ 0.78
TSPAN4-204ENST00000397404 C5orf67F2Z3F1 127 aa19.93■□□□□ 0.78
TSPAN4-204ENST00000397404 F8VP50 259 aa19.93■□□□□ 0.78
TSPAN4-204ENST00000397404 DDX3YO15523 660 aaKnown RBP19.93■□□□□ 0.78
TSPAN4-204ENST00000397404 CTAGE8P0CG41 777 aa19.93■□□□□ 0.78
TSPAN4-204ENST00000397404 CTSAP10619 480 aa19.93■□□□□ 0.78
TSPAN4-204ENST00000397404 BMPR1AP36894 532 aa19.93■□□□□ 0.78
TSPAN4-204ENST00000397404 NDUFV1P49821 464 aa19.93■□□□□ 0.78
TSPAN4-204ENST00000397404 PEX5P50542 639 aa19.93■□□□□ 0.78
TSPAN4-204ENST00000397404 AIF1P55008 147 aa19.93■□□□□ 0.78
TSPAN4-204ENST00000397404 ADCY1Q08828 1119 aa19.93■□□□□ 0.78
TSPAN4-204ENST00000397404 RAB33AQ14088 237 aa19.93■□□□□ 0.78
TSPAN4-204ENST00000397404 CC2D1AQ6P1N0 951 aaPredicted RBP19.93■□□□□ 0.78
TSPAN4-204ENST00000397404 CTAGE6Q86UF2 777 aa19.93■□□□□ 0.78
TSPAN4-204ENST00000397404 CREG2Q8IUH2 290 aa19.93■□□□□ 0.78
TSPAN4-204ENST00000397404 CTAGE4Q8IX94 777 aa19.93■□□□□ 0.78
TSPAN4-204ENST00000397404 VPS52Q8N1B4 723 aa19.93■□□□□ 0.78
TSPAN4-204ENST00000397404 NUP93Q8N1F7 819 aa19.93■□□□□ 0.78
TSPAN4-204ENST00000397404 RXFP2Q8WXD0 754 aa19.93■□□□□ 0.78
TSPAN4-204ENST00000397404 RBM41Q96IZ5 413 aaKnown RBP19.93■□□□□ 0.78
TSPAN4-204ENST00000397404 KCNK16Q96T55 309 aa19.93■□□□□ 0.78
TSPAN4-204ENST00000397404 IL37Q9NZH6 218 aa19.93■□□□□ 0.78
TSPAN4-204ENST00000397404 TJP2Q9UDY2 1190 aa19.93■□□□□ 0.78
TSPAN4-204ENST00000397404 EFCAB8A8MWE9 144 aa19.92■□□□□ 0.78
TSPAN4-204ENST00000397404 PGRMC1O00264 195 aaKnown RBP19.92■□□□□ 0.78
TSPAN4-204ENST00000397404 RIOK3O14730 519 aaKnown RBP19.92■□□□□ 0.78
TSPAN4-204ENST00000397404 ABLIM3O94929 683 aa19.92■□□□□ 0.78
TSPAN4-204ENST00000397404 LINC00271P0C7V0 271 aa19.92■□□□□ 0.78
TSPAN4-204ENST00000397404 HAPLN1P10915 354 aaPredicted RBP19.92■□□□□ 0.78
TSPAN4-204ENST00000397404 CYP2F1P24903 491 aa19.92■□□□□ 0.78
TSPAN4-204ENST00000397404 ROR1Q01973 937 aa19.92■□□□□ 0.78
TSPAN4-204ENST00000397404 SLC25A52Q3SY17 297 aa19.92■□□□□ 0.78
TSPAN4-204ENST00000397404 BOLA3Q53S33 107 aa19.92■□□□□ 0.78
TSPAN4-204ENST00000397404 ODF2Q5BJF6 829 aa19.92■□□□□ 0.78
TSPAN4-204ENST00000397404 PDE12Q6L8Q7 609 aaKnown RBP19.92■□□□□ 0.78
TSPAN4-204ENST00000397404 PSTKQ8IV42 348 aaKnown RBP19.92■□□□□ 0.78
TSPAN4-204ENST00000397404 MYRIPQ8NFW9 859 aa19.92■□□□□ 0.78
TSPAN4-204ENST00000397404 EXD1Q8NHP7 514 aa19.92■□□□□ 0.78
TSPAN4-204ENST00000397404 CENPIQ92674 756 aaPredicted RBP19.92■□□□□ 0.78
TSPAN4-204ENST00000397404 BTBD6Q96KE9 485 aa19.92■□□□□ 0.78
TSPAN4-204ENST00000397404 SLC2A13Q96QE2 648 aa19.92■□□□□ 0.78
TSPAN4-204ENST00000397404 VN1R3Q9BXE9 311 aa19.92■□□□□ 0.78
TSPAN4-204ENST00000397404 FAM92AA1XBS5 289 aa19.92■□□□□ 0.78
TSPAN4-204ENST00000397404 CCDC85CA6NKD9 419 aa19.92■□□□□ 0.78
TSPAN4-204ENST00000397404 TNFRSF10BO14763 440 aa19.92■□□□□ 0.78
TSPAN4-204ENST00000397404 NCK2O43639 380 aa19.92■□□□□ 0.78
TSPAN4-204ENST00000397404 GABBR2O75899 941 aa19.92■□□□□ 0.78
TSPAN4-204ENST00000397404 F9P00740 461 aa19.92■□□□□ 0.78
TSPAN4-204ENST00000397404 LTFP02788 710 aa19.92■□□□□ 0.78
TSPAN4-204ENST00000397404 ATF2P15336 505 aa19.92■□□□□ 0.78
TSPAN4-204ENST00000397404 SLC5A3P53794 718 aa19.92■□□□□ 0.78
TSPAN4-204ENST00000397404 PLD1Q13393 1074 aa19.92■□□□□ 0.78
TSPAN4-204ENST00000397404 LLGL2Q6P1M3 1020 aa19.92■□□□□ 0.78
TSPAN4-204ENST00000397404 TAS1R1Q7RTX1 841 aa19.92■□□□□ 0.78
TSPAN4-204ENST00000397404 PHLDB2Q86SQ0 1253 aa19.92■□□□□ 0.78
TSPAN4-204ENST00000397404 RCOR2Q8IZ40 523 aa19.92■□□□□ 0.78
TSPAN4-204ENST00000397404 JOSD2Q8TAC2 188 aa19.92■□□□□ 0.78
TSPAN4-204ENST00000397404 KHSRPQ92945 711 aaKnown RBP eCLIP19.92■□□□□ 0.78
TSPAN4-204ENST00000397404 NT5C3BQ969T7 300 aa19.92■□□□□ 0.78
TSPAN4-204ENST00000397404 FAM149B1Q96BN6 582 aa19.92■□□□□ 0.78
TSPAN4-204ENST00000397404 PGAP3Q96FM1 320 aaPredicted RBP19.92■□□□□ 0.78
TSPAN4-204ENST00000397404 C11orf84Q9BUA3 381 aaPredicted RBP19.92■□□□□ 0.78
TSPAN4-204ENST00000397404 ULBP1Q9BZM6 244 aa19.92■□□□□ 0.78
TSPAN4-204ENST00000397404 ZBP1Q9H171 429 aa19.92■□□□□ 0.78
TSPAN4-204ENST00000397404 GOLPH3Q9H4A6 298 aa19.92■□□□□ 0.78
TSPAN4-204ENST00000397404 ABCC13Q9NSE7 274 aa19.92■□□□□ 0.78
TSPAN4-204ENST00000397404 PACSIN2Q9UNF0 486 aaPredicted RBP19.92■□□□□ 0.78
TSPAN4-204ENST00000397404 SCML2Q9UQR0 700 aa19.92■□□□□ 0.78
TSPAN4-204ENST00000397404 EFR3BQ9Y2G0 817 aa19.92■□□□□ 0.78
TSPAN4-204ENST00000397404 CAPN9O14815 690 aa19.91■□□□□ 0.78
TSPAN4-204ENST00000397404 LRCH4O75427 683 aa19.91■□□□□ 0.78
TSPAN4-204ENST00000397404 ZRANB2O95218 330 aaKnown RBP eCLIP19.91■□□□□ 0.78
TSPAN4-204ENST00000397404 OR1D2P34982 312 aa19.91■□□□□ 0.78
TSPAN4-204ENST00000397404 GTF2F1P35269 517 aaKnown RBP eCLIP19.91■□□□□ 0.786e-7■■■■■ 33.1
TSPAN4-204ENST00000397404 FLT3P36888 993 aa19.91■□□□□ 0.78
TSPAN4-204ENST00000397404 ZNF252P-AS1Q0IIN9 211 aa19.91■□□□□ 0.78
TSPAN4-204ENST00000397404 MTA1Q13330 715 aa19.91■□□□□ 0.78
TSPAN4-204ENST00000397404 DENND5BQ6ZUT9 1274 aa19.91■□□□□ 0.78
TSPAN4-204ENST00000397404 TMCO2Q7Z6W1 182 aaPredicted RBP19.91■□□□□ 0.78
TSPAN4-204ENST00000397404 MON1AQ86VX9 555 aa19.91■□□□□ 0.78
TSPAN4-204ENST00000397404 TEKT4Q8WW24 435 aa19.91■□□□□ 0.78
TSPAN4-204ENST00000397404 OVCA2Q8WZ82 227 aa19.91■□□□□ 0.78
TSPAN4-204ENST00000397404 RNPC3Q96LT9 517 aaKnown RBP19.91■□□□□ 0.78
TSPAN4-204ENST00000397404 CDK5RAP1Q96SZ6 601 aaKnown RBP19.91■□□□□ 0.78
TSPAN4-204ENST00000397404 CLSTN3Q9BQT9 956 aa19.91■□□□□ 0.78
TSPAN4-204ENST00000397404 EMILIN2Q9BXX0 1053 aa19.91■□□□□ 0.78
TSPAN4-204ENST00000397404 TRIM7Q9C029 511 aa19.91■□□□□ 0.78
TSPAN4-204ENST00000397404 NGRNQ9NPE2 291 aaKnown RBP19.91■□□□□ 0.78
TSPAN4-204ENST00000397404 PCDHA11Q9Y5I1 949 aa19.91■□□□□ 0.78
TSPAN4-204ENST00000397404 KIAA1671Q9BY89 1806 aa19.9■□□□□ 0.78
TSPAN4-204ENST00000397404 GOLGA6L10A0A0M3HER8 536 aa19.9■□□□□ 0.78
TSPAN4-204ENST00000397404 WDR27A2RRH5 827 aa19.9■□□□□ 0.78
TSPAN4-204ENST00000397404 CCDC188H7C350 402 aa19.9■□□□□ 0.78
TSPAN4-204ENST00000397404 PRPSAP2O60256 369 aa19.9■□□□□ 0.78
TSPAN4-204ENST00000397404 LILRB3O75022 631 aa19.9■□□□□ 0.78
TSPAN4-204ENST00000397404 ENDOD1O94919 500 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms