RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 CMASQ8NFW8 434 aaPredicted RBP24.83■■□□□ 1.57
TSPAN4-203ENST00000397397 ZNF707Q96C28 371 aaPredicted RBP24.83■■□□□ 1.57
TSPAN4-203ENST00000397397 PABPC5Q96DU9 382 aaKnown RBP24.83■■□□□ 1.57
TSPAN4-203ENST00000397397 CORO1BQ9BR76 489 aa24.83■■□□□ 1.57
TSPAN4-203ENST00000397397 TTLL2Q9BWV7 592 aa24.83■■□□□ 1.57
TSPAN4-203ENST00000397397 APOL5Q9BWW9 433 aa24.83■■□□□ 1.57
TSPAN4-203ENST00000397397 PIDD1Q9HB75 910 aa24.83■■□□□ 1.57
TSPAN4-203ENST00000397397 IL37Q9NZH6 218 aa24.83■■□□□ 1.57
TSPAN4-203ENST00000397397 USP3Q9Y6I4 520 aa24.83■■□□□ 1.57
TSPAN4-203ENST00000397397 EIF3CLB5ME19 914 aaKnown RBP24.82■■□□□ 1.56
TSPAN4-203ENST00000397397 TBX10O75333 385 aa24.82■■□□□ 1.56
TSPAN4-203ENST00000397397 FBXO21O94952 628 aa24.82■■□□□ 1.56
TSPAN4-203ENST00000397397 ZBED1O96006 694 aa24.82■■□□□ 1.56
TSPAN4-203ENST00000397397 CALB1P05937 261 aa24.82■■□□□ 1.56
TSPAN4-203ENST00000397397 HOXB8P17481 243 aaPredicted RBP24.82■■□□□ 1.56
TSPAN4-203ENST00000397397 GABRB2P47870 512 aa24.82■■□□□ 1.56
TSPAN4-203ENST00000397397 C1QBPQ07021 282 aaKnown RBP24.82■■□□□ 1.56
TSPAN4-203ENST00000397397 PTP4A2Q12974 167 aa24.82■■□□□ 1.56
TSPAN4-203ENST00000397397 COL19A1Q14993 1142 aa24.82■■□□□ 1.56
TSPAN4-203ENST00000397397 SPA17Q15506 151 aa24.82■■□□□ 1.56
TSPAN4-203ENST00000397397 OR6B2Q6IFH4 312 aa24.82■■□□□ 1.56
TSPAN4-203ENST00000397397 SYCE2Q6PIF2 218 aa24.82■■□□□ 1.56
TSPAN4-203ENST00000397397 SCUBE3Q8IX30 993 aa24.82■■□□□ 1.56
TSPAN4-203ENST00000397397 MCOLN2Q8IZK6 566 aa24.82■■□□□ 1.56
TSPAN4-203ENST00000397397 HS6ST3Q8IZP7 471 aa24.82■■□□□ 1.56
TSPAN4-203ENST00000397397 SMG7Q92540 1137 aaKnown RBP24.82■■□□□ 1.56
TSPAN4-203ENST00000397397 FBXO32Q969P5 355 aa24.82■■□□□ 1.56
TSPAN4-203ENST00000397397 ZNF830Q96NB3 372 aaPredicted RBP24.82■■□□□ 1.56
TSPAN4-203ENST00000397397 EIF3CQ99613 913 aaKnown RBP24.82■■□□□ 1.56
TSPAN4-203ENST00000397397 CNGB3Q9NQW8 809 aa24.82■■□□□ 1.56
TSPAN4-203ENST00000397397 CLEC1BQ9P126 229 aa24.82■■□□□ 1.56
TSPAN4-203ENST00000397397 ZNF263O14978 683 aa24.81■■□□□ 1.56
TSPAN4-203ENST00000397397 ARHGAP6O43182 974 aa24.81■■□□□ 1.56
TSPAN4-203ENST00000397397 PAPSS1O43252 624 aaPredicted RBP24.81■■□□□ 1.56
TSPAN4-203ENST00000397397 PTPN2P17706 415 aa24.81■■□□□ 1.56
TSPAN4-203ENST00000397397 DLX2Q07687 328 aaPredicted RBP24.81■■□□□ 1.56
TSPAN4-203ENST00000397397 TAF10Q12962 218 aa24.81■■□□□ 1.56
TSPAN4-203ENST00000397397 FAM183BPQ6ZVS7 135 aa24.81■■□□□ 1.56
TSPAN4-203ENST00000397397 FEZF2Q8TBJ5 459 aa24.81■■□□□ 1.56
TSPAN4-203ENST00000397397 CLEC4CQ8WTT0 213 aa24.81■■□□□ 1.56
TSPAN4-203ENST00000397397 NDRG1Q92597 394 aaKnown RBP24.81■■□□□ 1.56
TSPAN4-203ENST00000397397 TRMT2BQ96GJ1 504 aaKnown RBP24.81■■□□□ 1.56
TSPAN4-203ENST00000397397 MYRFLQ96LU7 910 aa24.81■■□□□ 1.56
TSPAN4-203ENST00000397397 ZNF334Q9HCZ1 680 aaPredicted RBP24.81■■□□□ 1.56
TSPAN4-203ENST00000397397 HCFC1R1Q9NWW0 138 aa24.81■■□□□ 1.56
TSPAN4-203ENST00000397397 SCML2Q9UQR0 700 aa24.81■■□□□ 1.56
TSPAN4-203ENST00000397397 IPO7O95373 1038 aaKnown RBP24.8■■□□□ 1.56
TSPAN4-203ENST00000397397 PAPLNO95428 1278 aa24.8■■□□□ 1.56
TSPAN4-203ENST00000397397 LCA5LO95447 670 aa24.8■■□□□ 1.56
TSPAN4-203ENST00000397397 DAOAP59103 153 aa24.8■■□□□ 1.56
TSPAN4-203ENST00000397397 SKIV2LQ15477 1246 aaKnown RBP24.8■■□□□ 1.56
TSPAN4-203ENST00000397397 PM20D1Q6GTS8 502 aa24.8■■□□□ 1.56
TSPAN4-203ENST00000397397 PHLDB2Q86SQ0 1253 aa24.8■■□□□ 1.56
TSPAN4-203ENST00000397397 XYLT1Q86Y38 959 aa24.8■■□□□ 1.56
TSPAN4-203ENST00000397397 VCPIP1Q96JH7 1222 aa24.8■■□□□ 1.56
TSPAN4-203ENST00000397397 SLITRK1Q96PX8 696 aa24.8■■□□□ 1.56
TSPAN4-203ENST00000397397 ASAH2Q9NR71 780 aa24.8■■□□□ 1.56
TSPAN4-203ENST00000397397 DNMT3BQ9UBC3 853 aaKnown RBP24.8■■□□□ 1.56
TSPAN4-203ENST00000397397 UXTQ9UBK9 157 aaPredicted RBP24.8■■□□□ 1.56
TSPAN4-203ENST00000397397 STRIP2Q9ULQ0 834 aa24.8■■□□□ 1.56
TSPAN4-203ENST00000397397 REV3LO60673 3130 aa24.8■■□□□ 1.56
TSPAN4-203ENST00000397397 FAM92AA1XBS5 289 aa24.79■■□□□ 1.56
TSPAN4-203ENST00000397397 ABCB4P21439 1286 aa24.79■■□□□ 1.56
TSPAN4-203ENST00000397397 LTBRP36941 435 aa24.79■■□□□ 1.56
TSPAN4-203ENST00000397397 MAGEA1P43355 309 aa24.79■■□□□ 1.56
TSPAN4-203ENST00000397397 MRPS5P82675 430 aaKnown RBP24.79■■□□□ 1.56
TSPAN4-203ENST00000397397 ZNF268Q14587 947 aaPredicted RBP24.79■■□□□ 1.56
TSPAN4-203ENST00000397397 C10orf76Q5T2E6 689 aa24.79■■□□□ 1.56
TSPAN4-203ENST00000397397 TMC8Q8IU68 726 aa24.79■■□□□ 1.56
TSPAN4-203ENST00000397397 ZDHHC17Q8IUH5 632 aa24.79■■□□□ 1.56
TSPAN4-203ENST00000397397 SCML4Q8N228 414 aa24.79■■□□□ 1.56
TSPAN4-203ENST00000397397 TRIM11Q96F44 468 aa24.79■■□□□ 1.56
TSPAN4-203ENST00000397397 LRRC3Q9BY71 257 aa24.79■■□□□ 1.56
TSPAN4-203ENST00000397397 KCNF1Q9H3M0 494 aa24.79■■□□□ 1.56
TSPAN4-203ENST00000397397 GMIPQ9P107 970 aa24.79■■□□□ 1.56
TSPAN4-203ENST00000397397 GOLGA8SH3BPF8 625 aa24.78■■□□□ 1.56
TSPAN4-203ENST00000397397 H2AFZP0C0S5 128 aa24.78■■□□□ 1.56
TSPAN4-203ENST00000397397 MYL4P12829 197 aa24.78■■□□□ 1.56
TSPAN4-203ENST00000397397 GALCP54803 685 aa24.78■■□□□ 1.56
TSPAN4-203ENST00000397397 H2AFVQ71UI9 128 aa24.78■■□□□ 1.56
TSPAN4-203ENST00000397397 GRASPQ7Z6J2 395 aaPredicted RBP24.78■■□□□ 1.56
TSPAN4-203ENST00000397397 GPR149Q86SP6 731 aa24.78■■□□□ 1.56
TSPAN4-203ENST00000397397 ACRBPQ8NEB7 543 aa24.78■■□□□ 1.56
TSPAN4-203ENST00000397397 IRGQQ8WZA9 623 aa24.78■■□□□ 1.56
TSPAN4-203ENST00000397397 ZNF653Q96CK0 615 aa24.78■■□□□ 1.56
TSPAN4-203ENST00000397397 WDR35Q9P2L0 1181 aa24.78■■□□□ 1.56
TSPAN4-203ENST00000397397 CHORDC1Q9UHD1 332 aaPredicted RBP24.78■■□□□ 1.56
TSPAN4-203ENST00000397397 C2orf16Q68DN1 1984 aa24.78■■□□□ 1.56
TSPAN4-203ENST00000397397 ANKRD62A6NC57 917 aa24.78■■□□□ 1.56
TSPAN4-203ENST00000397397 SART1O43290 800 aaKnown RBP24.78■■□□□ 1.56
TSPAN4-203ENST00000397397 RHOP08100 348 aa24.78■■□□□ 1.56
TSPAN4-203ENST00000397397 RRM1P23921 792 aa24.78■■□□□ 1.56
TSPAN4-203ENST00000397397 NTHL1P78549 312 aa24.78■■□□□ 1.56
TSPAN4-203ENST00000397397 SLC6A3Q01959 620 aa24.78■■□□□ 1.56
TSPAN4-203ENST00000397397 OLFML1Q6UWY5 402 aa24.78■■□□□ 1.56
TSPAN4-203ENST00000397397 TOGARAM2Q6ZUX3 1019 aa24.78■■□□□ 1.56
TSPAN4-203ENST00000397397 PDZD8Q8NEN9 1154 aa24.78■■□□□ 1.56
TSPAN4-203ENST00000397397 DESI2Q9BSY9 194 aa24.78■■□□□ 1.56
TSPAN4-203ENST00000397397 PACSIN1Q9BY11 444 aa24.78■■□□□ 1.56
TSPAN4-203ENST00000397397 LUC7LQ9NQ29 371 aaKnown RBP24.78■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms