RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 C8orf34Q49A92 452 aa9.35□□□□□ -0.91
CAPN3-208ENST00000397204 HSF5Q4G112 596 aaPredicted RBP9.35□□□□□ -0.91
CAPN3-208ENST00000397204 C2orf27AQ580R0 203 aa9.35□□□□□ -0.91
CAPN3-208ENST00000397204 DENND5BQ6ZUT9 1274 aa9.35□□□□□ -0.91
CAPN3-208ENST00000397204 GPD1LQ8N335 351 aa9.35□□□□□ -0.91
CAPN3-208ENST00000397204 KDF1Q8NAX2 398 aaPredicted RBP9.35□□□□□ -0.91
CAPN3-208ENST00000397204 MYCBPAPQ8TBZ2 947 aa9.35□□□□□ -0.91
CAPN3-208ENST00000397204 HPDLQ96IR7 371 aa9.35□□□□□ -0.91
CAPN3-208ENST00000397204 ANKRD36BP1Q96IX9 119 aa9.35□□□□□ -0.91
CAPN3-208ENST00000397204 CNOT6LQ96LI5 555 aaKnown RBP9.35□□□□□ -0.91
CAPN3-208ENST00000397204 SYT15Q9BQS2 421 aa9.35□□□□□ -0.91
CAPN3-208ENST00000397204 TTLL2Q9BWV7 592 aa9.35□□□□□ -0.91
CAPN3-208ENST00000397204 KIAA1586Q9HCI6 787 aa9.35□□□□□ -0.91
CAPN3-208ENST00000397204 TMEM9BQ9NQ34 198 aa9.35□□□□□ -0.91
CAPN3-208ENST00000397204 INTS13Q9NVM9 706 aa9.35□□□□□ -0.91
CAPN3-208ENST00000397204 TBC1D7Q9P0N9 293 aa9.35□□□□□ -0.91
CAPN3-208ENST00000397204 INVSQ9Y283 1065 aa9.35□□□□□ -0.91
CAPN3-208ENST00000397204 FASNP49327 2511 aaKnown RBP9.35□□□□□ -0.91
CAPN3-208ENST00000397204 GREB1Q4ZG55 1949 aa9.35□□□□□ -0.91
CAPN3-208ENST00000397204 FRMD3A2A2Y4 597 aa9.34□□□□□ -0.91
CAPN3-208ENST00000397204 GOLGA8IPA6NC78 632 aa9.34□□□□□ -0.91
CAPN3-208ENST00000397204 ZNF840PA6NDX5 716 aa9.34□□□□□ -0.91
CAPN3-208ENST00000397204 GOLGA8JA6NMD2 632 aa9.34□□□□□ -0.91
CAPN3-208ENST00000397204 LEFTY2O00292 366 aa9.34□□□□□ -0.91
CAPN3-208ENST00000397204 CDX4O14627 284 aaPredicted RBP9.34□□□□□ -0.91
CAPN3-208ENST00000397204 SIAH2O43255 324 aa9.34□□□□□ -0.91
CAPN3-208ENST00000397204 TNNC2P02585 160 aa9.34□□□□□ -0.91
CAPN3-208ENST00000397204 PDGFRBP09619 1106 aa9.34□□□□□ -0.91
CAPN3-208ENST00000397204 IDEP14735 1019 aa9.34□□□□□ -0.91
CAPN3-208ENST00000397204 PDCP20941 246 aa9.34□□□□□ -0.91
CAPN3-208ENST00000397204 WARSP23381 471 aaKnown RBP9.34□□□□□ -0.91
CAPN3-208ENST00000397204 BDNFP23560 247 aa9.34□□□□□ -0.91
CAPN3-208ENST00000397204 ANXA13P27216 316 aa9.34□□□□□ -0.91
CAPN3-208ENST00000397204 GNL1P36915 607 aaPredicted RBP9.34□□□□□ -0.91
CAPN3-208ENST00000397204 EIF2DP41214 584 aaKnown RBP9.34□□□□□ -0.91
CAPN3-208ENST00000397204 DPP6P42658 865 aa9.34□□□□□ -0.91
CAPN3-208ENST00000397204 TNFRSF4P43489 277 aa9.34□□□□□ -0.91
CAPN3-208ENST00000397204 NOP14P78316 857 aaKnown RBP9.34□□□□□ -0.91
CAPN3-208ENST00000397204 IRX4P78413 519 aa9.34□□□□□ -0.91
CAPN3-208ENST00000397204 ZXDBP98169 803 aa9.34□□□□□ -0.91
CAPN3-208ENST00000397204 SPDYCQ5MJ68 293 aa9.34□□□□□ -0.91
CAPN3-208ENST00000397204 SH3PXD2AQ5TCZ1 1133 aa9.34□□□□□ -0.91
CAPN3-208ENST00000397204 SCARA3Q6AZY7 606 aa9.34□□□□□ -0.91
CAPN3-208ENST00000397204 ANO7Q6IWH7 933 aa9.34□□□□□ -0.91
CAPN3-208ENST00000397204 CCDC73Q6ZRK6 1079 aa9.34□□□□□ -0.91
CAPN3-208ENST00000397204 STXBP4Q6ZWJ1 553 aa9.34□□□□□ -0.91
CAPN3-208ENST00000397204 CYP2U1Q7Z449 544 aa9.34□□□□□ -0.91
CAPN3-208ENST00000397204 OLIG1Q8TAK6 271 aa9.34□□□□□ -0.91
CAPN3-208ENST00000397204 KBTBD7Q8WVZ9 684 aa9.34□□□□□ -0.91
CAPN3-208ENST00000397204 FOXJ1Q92949 421 aa9.34□□□□□ -0.91
CAPN3-208ENST00000397204 C8orf48Q96LL4 319 aa9.34□□□□□ -0.91
CAPN3-208ENST00000397204 PNKPQ96T60 521 aa9.34□□□□□ -0.91
CAPN3-208ENST00000397204 CBWD1Q9BRT8 395 aa9.34□□□□□ -0.91
CAPN3-208ENST00000397204 MTMR12Q9C0I1 747 aa9.34□□□□□ -0.91
CAPN3-208ENST00000397204 PCIF1Q9H4Z3 704 aa9.34□□□□□ -0.91
CAPN3-208ENST00000397204 PANK4Q9NVE7 773 aa9.34□□□□□ -0.91
CAPN3-208ENST00000397204 EVLQ9UI08 416 aaPredicted RBP9.34□□□□□ -0.91
CAPN3-208ENST00000397204 FBXO2Q9UK22 296 aaPredicted RBP9.34□□□□□ -0.91
CAPN3-208ENST00000397204 WASF3Q9UPY6 502 aa9.34□□□□□ -0.91
CAPN3-208ENST00000397204 CLIC4Q9Y696 253 aa9.34□□□□□ -0.91
CAPN3-208ENST00000397204 PKD1L2Q7Z442 2459 aa9.34□□□□□ -0.91
CAPN3-208ENST00000397204 SPEGQ15772 3267 aa9.34□□□□□ -0.91
CAPN3-208ENST00000397204 CACNA1EQ15878 2313 aa9.34□□□□□ -0.91
CAPN3-208ENST00000397204 AKAP13Q12802 2813 aa9.33□□□□□ -0.92
CAPN3-208ENST00000397204 BAHCC1Q9P281 2608 aa9.33□□□□□ -0.92
CAPN3-208ENST00000397204 PCNX2A6NKB5 2137 aa9.33□□□□□ -0.92
CAPN3-208ENST00000397204 TNFRSF10BO14763 440 aa9.33□□□□□ -0.92
CAPN3-208ENST00000397204 GIPC1O14908 333 aa9.33□□□□□ -0.92
CAPN3-208ENST00000397204 HCRTO43612 131 aa9.33□□□□□ -0.92
CAPN3-208ENST00000397204 TACC1O75410 805 aa9.33□□□□□ -0.92
CAPN3-208ENST00000397204 PRPF6O94906 941 aaKnown RBP9.33□□□□□ -0.92
CAPN3-208ENST00000397204 GRIA2P42262 883 aa9.33□□□□□ -0.92
CAPN3-208ENST00000397204 DHPSP49366 369 aaPredicted RBP9.33□□□□□ -0.92
CAPN3-208ENST00000397204 CASP5P51878 434 aa9.33□□□□□ -0.92
CAPN3-208ENST00000397204 SEC13P55735 322 aa9.33□□□□□ -0.92
CAPN3-208ENST00000397204 CYP27A1Q02318 531 aa9.33□□□□□ -0.92
CAPN3-208ENST00000397204 ZNF252P-AS1Q0IIN9 211 aa9.33□□□□□ -0.92
CAPN3-208ENST00000397204 LMAN2Q12907 356 aa9.33□□□□□ -0.92
CAPN3-208ENST00000397204 DHCR24Q15392 516 aa9.33□□□□□ -0.92
CAPN3-208ENST00000397204 CCDC142Q17RM4 750 aa9.33□□□□□ -0.92
CAPN3-208ENST00000397204 GAB4Q2WGN9 574 aa9.33□□□□□ -0.92
CAPN3-208ENST00000397204 EOGTQ5NDL2 527 aa9.33□□□□□ -0.92
CAPN3-208ENST00000397204 TDRD10Q5VZ19 366 aaKnown RBP9.33□□□□□ -0.92
CAPN3-208ENST00000397204 RHBDF2Q6PJF5 856 aa9.33□□□□□ -0.92
CAPN3-208ENST00000397204 UNQ6494/PRO21346Q6UXR6 183 aa9.33□□□□□ -0.92
CAPN3-208ENST00000397204 LPCAT2Q7L5N7 544 aa9.33□□□□□ -0.92
CAPN3-208ENST00000397204 DDX42Q86XP3 938 aaKnown RBP eCLIP9.33□□□□□ -0.92
CAPN3-208ENST00000397204 CCDC65Q8IXS2 484 aa9.33□□□□□ -0.92
CAPN3-208ENST00000397204 CCDC33Q8N5R6 958 aa9.33□□□□□ -0.92
CAPN3-208ENST00000397204 OR5B17Q8NGF7 314 aa9.33□□□□□ -0.92
CAPN3-208ENST00000397204 NOC3LQ8WTT2 800 aaKnown RBP9.33□□□□□ -0.92
CAPN3-208ENST00000397204 PIGKQ92643 395 aa9.33□□□□□ -0.92
CAPN3-208ENST00000397204 MYLPFQ96A32 169 aa9.33□□□□□ -0.92
CAPN3-208ENST00000397204 SLITRK1Q96PX8 696 aa9.33□□□□□ -0.92
CAPN3-208ENST00000397204 MMS19Q96T76 1030 aa9.33□□□□□ -0.92
CAPN3-208ENST00000397204 NUSAP1Q9BXS6 441 aaKnown RBP9.33□□□□□ -0.92
CAPN3-208ENST00000397204 TPSD1Q9BZJ3 242 aa9.33□□□□□ -0.92
CAPN3-208ENST00000397204 LRRC27Q9C0I9 530 aa9.33□□□□□ -0.92
CAPN3-208ENST00000397204 RNF38Q9H0F5 515 aa9.33□□□□□ -0.92
CAPN3-208ENST00000397204 POLMQ9NP87 494 aaPredicted RBP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms