RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 ZMYND10O75800 440 aa13.98□□□□□ -0.17
SEC13-209ENST00000397117 CYP11A1P05108 521 aa13.98□□□□□ -0.17
SEC13-209ENST00000397117 TYMPP19971 482 aa13.98□□□□□ -0.17
SEC13-209ENST00000397117 PCSK1P29120 753 aa13.98□□□□□ -0.17
SEC13-209ENST00000397117 CNGA2Q16280 664 aa13.98□□□□□ -0.17
SEC13-209ENST00000397117 NAA35Q5VZE5 725 aa13.98□□□□□ -0.17
SEC13-209ENST00000397117 ACAD10Q6JQN1 1059 aa13.98□□□□□ -0.17
SEC13-209ENST00000397117 OSTM1Q86WC4 334 aa13.98□□□□□ -0.17
SEC13-209ENST00000397117 MAML2Q8IZL2 1156 aaPredicted RBP13.98□□□□□ -0.17
SEC13-209ENST00000397117 CRYBG2Q8N1P7 616 aa13.98□□□□□ -0.17
SEC13-209ENST00000397117 THEM5Q8N1Q8 247 aa13.98□□□□□ -0.17
SEC13-209ENST00000397117 C12orf29Q8N999 325 aa13.98□□□□□ -0.17
SEC13-209ENST00000397117 TMEM35BQ8NCS4 154 aa13.98□□□□□ -0.17
SEC13-209ENST00000397117 ATRIPQ8WXE1 791 aa13.98□□□□□ -0.17
SEC13-209ENST00000397117 CPA5Q8WXQ8 436 aa13.98□□□□□ -0.17
SEC13-209ENST00000397117 CYFIP2Q96F07 1278 aa13.98□□□□□ -0.17
SEC13-209ENST00000397117 C16orf45Q96MC5 204 aaPredicted RBP13.98□□□□□ -0.17
SEC13-209ENST00000397117 RPP25Q9BUL9 199 aaKnown RBP13.98□□□□□ -0.17
SEC13-209ENST00000397117 PACSIN1Q9BY11 444 aa13.98□□□□□ -0.17
SEC13-209ENST00000397117 LACRTQ9GZZ8 138 aa13.98□□□□□ -0.17
SEC13-209ENST00000397117 ISCUQ9H1K1 167 aa13.98□□□□□ -0.17
SEC13-209ENST00000397117 DPEP3Q9H4B8 488 aa13.98□□□□□ -0.17
SEC13-209ENST00000397117 TFR2Q9UP52 801 aa13.98□□□□□ -0.17
SEC13-209ENST00000397117 ZFP37Q9Y6Q3 630 aaPredicted RBP13.98□□□□□ -0.17
SEC13-209ENST00000397117 NUMBLQ9Y6R0 609 aa13.98□□□□□ -0.17
SEC13-209ENST00000397117 FRYLO94915 3013 aa13.98□□□□□ -0.17
SEC13-209ENST00000397117 ATP8B3O60423 1300 aa13.98□□□□□ -0.17
SEC13-209ENST00000397117 SF3B1O75533 1304 aaKnown RBP eCLIP13.98□□□□□ -0.174e-7■■■■■ 63.1
SEC13-209ENST00000397117 FAM170AA1A519 330 aa13.97□□□□□ -0.17
SEC13-209ENST00000397117 ANKRD62A6NC57 917 aa13.97□□□□□ -0.17
SEC13-209ENST00000397117 RCCD1A6NED2 376 aa13.97□□□□□ -0.17
SEC13-209ENST00000397117 O00370 1275 aa13.97□□□□□ -0.17
SEC13-209ENST00000397117 PJA2O43164 708 aa13.97□□□□□ -0.17
SEC13-209ENST00000397117 CYP1A1P04798 512 aaPredicted RBP13.97□□□□□ -0.17
SEC13-209ENST00000397117 RPL17P18621 184 aaKnown RBP13.97□□□□□ -0.17
SEC13-209ENST00000397117 ABCB4P21439 1286 aa13.97□□□□□ -0.17
SEC13-209ENST00000397117 ARHGAP25P42331 645 aa13.97□□□□□ -0.17
SEC13-209ENST00000397117 GALCP54803 685 aa13.97□□□□□ -0.17
SEC13-209ENST00000397117 ELAVL2Q12926 359 aaKnown RBP13.97□□□□□ -0.17
SEC13-209ENST00000397117 OVOS1Q6IE37 1185 aa13.97□□□□□ -0.17
SEC13-209ENST00000397117 GET4Q7L5D6 327 aaPredicted RBP13.97□□□□□ -0.17
SEC13-209ENST00000397117 DNAAF5Q86Y56 855 aa13.97□□□□□ -0.17
SEC13-209ENST00000397117 SUMF1Q8NBK3 374 aa13.97□□□□□ -0.17
SEC13-209ENST00000397117 B3GALNT2Q8NCR0 500 aa13.97□□□□□ -0.17
SEC13-209ENST00000397117 PJA1Q8NG27 643 aa13.97□□□□□ -0.17
SEC13-209ENST00000397117 ZSWIM1Q9BR11 485 aa13.97□□□□□ -0.17
SEC13-209ENST00000397117 ZNF518BQ9C0D4 1074 aa13.97□□□□□ -0.17
SEC13-209ENST00000397117 LHX5Q9H2C1 402 aa13.97□□□□□ -0.17
SEC13-209ENST00000397117 FAM49BQ9NUQ9 324 aa13.97□□□□□ -0.17
SEC13-209ENST00000397117 HESX1Q9UBX0 185 aa13.97□□□□□ -0.17
SEC13-209ENST00000397117 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.97□□□□□ -0.17
SEC13-209ENST00000397117 NME7Q9Y5B8 376 aa13.97□□□□□ -0.17
SEC13-209ENST00000397117 MACROD2A1Z1Q3 448 aa13.97□□□□□ -0.17
SEC13-209ENST00000397117 M0QYV0 167 aa13.97□□□□□ -0.17
SEC13-209ENST00000397117 SYN3O14994 580 aa13.97□□□□□ -0.17
SEC13-209ENST00000397117 HCRTO43612 131 aa13.97□□□□□ -0.17
SEC13-209ENST00000397117 MICAL2O94851 1124 aa13.97□□□□□ -0.17
SEC13-209ENST00000397117 TMEM253P0C7T8 217 aa13.97□□□□□ -0.17
SEC13-209ENST00000397117 UNGP13051 313 aaPredicted RBP13.97□□□□□ -0.17
SEC13-209ENST00000397117 PTPN1P18031 435 aaKnown RBP13.97□□□□□ -0.17
SEC13-209ENST00000397117 FSHRP23945 695 aa13.97□□□□□ -0.17
SEC13-209ENST00000397117 ACAT1P24752 427 aaKnown RBP13.97□□□□□ -0.17
SEC13-209ENST00000397117 NAP1L1P55209 391 aaKnown RBP13.97□□□□□ -0.17
SEC13-209ENST00000397117 PSMC1P62191 440 aaKnown RBP13.97□□□□□ -0.17
SEC13-209ENST00000397117 NOMO3P69849 1222 aa13.97□□□□□ -0.17
SEC13-209ENST00000397117 GPC5P78333 572 aa13.97□□□□□ -0.17
SEC13-209ENST00000397117 CREMQ03060 361 aa13.97□□□□□ -0.17
SEC13-209ENST00000397117 CENPCQ03188 943 aa13.97□□□□□ -0.17
SEC13-209ENST00000397117 YWHAHQ04917 246 aaPredicted RBP13.97□□□□□ -0.17
SEC13-209ENST00000397117 PUM1Q14671 1186 aaKnown RBP eCLIP13.97□□□□□ -0.17
SEC13-209ENST00000397117 GOLGA7BQ2TAP0 167 aa13.97□□□□□ -0.17
SEC13-209ENST00000397117 ZC3H14Q6PJT7 736 aaKnown RBP13.97□□□□□ -0.17
SEC13-209ENST00000397117 LCLAT1Q6UWP7 414 aa13.97□□□□□ -0.17
SEC13-209ENST00000397117 DGLUCYQ7Z3D6 616 aa13.97□□□□□ -0.17
SEC13-209ENST00000397117 DCLK2Q8N568 766 aa13.97□□□□□ -0.17
SEC13-209ENST00000397117 ST13P5Q8NFI4 369 aaPredicted RBP13.97□□□□□ -0.17
SEC13-209ENST00000397117 RUBCNQ92622 972 aa13.97□□□□□ -0.17
SEC13-209ENST00000397117 TRIM11Q96F44 468 aa13.97□□□□□ -0.17
SEC13-209ENST00000397117 SYT15Q9BQS2 421 aa13.97□□□□□ -0.17
SEC13-209ENST00000397117 FOXQ1Q9C009 403 aa13.97□□□□□ -0.17
SEC13-209ENST00000397117 TRIM10Q9UDY6 481 aa13.97□□□□□ -0.17
SEC13-209ENST00000397117 TSPAN16Q9UKR8 245 aa13.97□□□□□ -0.17
SEC13-209ENST00000397117 CDH9Q9ULB4 789 aa13.97□□□□□ -0.17
SEC13-209ENST00000397117 PATJQ8NI35 1801 aa13.96□□□□□ -0.17
SEC13-209ENST00000397117 VWA8A3KMH1 1905 aa13.96□□□□□ -0.17
SEC13-209ENST00000397117 KIF2AO00139 706 aaPredicted RBP13.96□□□□□ -0.17
SEC13-209ENST00000397117 DNTTIP2Q5QJE6 756 aaKnown RBP13.96□□□□□ -0.17
SEC13-209ENST00000397117 PPP1R26Q5T8A7 1209 aaPredicted RBP13.96□□□□□ -0.17
SEC13-209ENST00000397117 FAM171A1Q5VUB5 890 aa13.96□□□□□ -0.17
SEC13-209ENST00000397117 ARHGAP17Q68EM7 881 aa13.96□□□□□ -0.17
SEC13-209ENST00000397117 DENND1BQ6P3S1 775 aa13.96□□□□□ -0.17
SEC13-209ENST00000397117 PRSS55Q6UWB4 352 aaPredicted RBP13.96□□□□□ -0.17
SEC13-209ENST00000397117 PARM1Q6UWI2 310 aa13.96□□□□□ -0.17
SEC13-209ENST00000397117 CEP57Q86XR8 500 aa13.96□□□□□ -0.17
SEC13-209ENST00000397117 MSANTD4Q8NCY6 345 aa13.96□□□□□ -0.17
SEC13-209ENST00000397117 C1orf131Q8NDD1 294 aaKnown RBP13.96□□□□□ -0.17
SEC13-209ENST00000397117 FGF14Q92915 247 aa13.96□□□□□ -0.17
SEC13-209ENST00000397117 SECISBP2LQ93073 1101 aaKnown RBP13.96□□□□□ -0.17
SEC13-209ENST00000397117 SHDQ96IW2 340 aa13.96□□□□□ -0.17
SEC13-209ENST00000397117 NOX5Q96PH1 765 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms