RNA–Protein interactions for RNA: ENST00000397030.5

MCF2L-208, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 6,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-208ENST00000397030 CELF6Q96J87 481 aaKnown RBP18.02■□□□□ 0.48
MCF2L-208ENST00000397030 RUSC1Q9BVN2 902 aa18.02■□□□□ 0.48
MCF2L-208ENST00000397030 PIF1Q9H611 641 aa18.02■□□□□ 0.48
MCF2L-208ENST00000397030 WDR19Q8NEZ3 1342 aa18.02■□□□□ 0.48
MCF2L-208ENST00000397030 ABCA8O94911 1581 aa18.02■□□□□ 0.48
MCF2L-208ENST00000397030 LRRC14BA6NHZ5 514 aa18.02■□□□□ 0.48
MCF2L-208ENST00000397030 AKR1A1P14550 325 aa18.02■□□□□ 0.48
MCF2L-208ENST00000397030 POP1Q99575 1024 aaKnown RBP18.02■□□□□ 0.48
MCF2L-208ENST00000397030 PHF20Q9BVI0 1012 aa18.02■□□□□ 0.48
MCF2L-208ENST00000397030 CAAP1Q9H8G2 361 aa18.02■□□□□ 0.48
MCF2L-208ENST00000397030 PTPRHQ9HD43 1115 aa18.02■□□□□ 0.48
MCF2L-208ENST00000397030 PXMP2Q9NR77 195 aa18.02■□□□□ 0.48
MCF2L-208ENST00000397030 E9PBE3 544 aa18.02■□□□□ 0.48
MCF2L-208ENST00000397030 TOMM70O94826 608 aa18.02■□□□□ 0.48
MCF2L-208ENST00000397030 EIF2S1P05198 315 aaKnown RBP18.02■□□□□ 0.48
MCF2L-208ENST00000397030 CASP4P49662 377 aa18.02■□□□□ 0.48
MCF2L-208ENST00000397030 STAT4Q14765 748 aa18.02■□□□□ 0.48
MCF2L-208ENST00000397030 FSCN1Q16658 493 aaKnown RBP18.02■□□□□ 0.48
MCF2L-208ENST00000397030 FAM83EQ2M2I3 478 aa18.02■□□□□ 0.48
MCF2L-208ENST00000397030 GJC2Q5T442 439 aaPredicted RBP18.02■□□□□ 0.48
MCF2L-208ENST00000397030 PCYOX1LQ8NBM8 494 aa18.02■□□□□ 0.48
MCF2L-208ENST00000397030 TNIP2Q8NFZ5 429 aa18.02■□□□□ 0.48
MCF2L-208ENST00000397030 SUSD6Q92537 303 aa18.02■□□□□ 0.48
MCF2L-208ENST00000397030 ABCG4Q9H172 646 aa18.02■□□□□ 0.48
MCF2L-208ENST00000397030 VPS9D1Q9Y2B5 631 aa18.02■□□□□ 0.48
MCF2L-208ENST00000397030 CCNT2O60583 730 aaKnown RBP18.02■□□□□ 0.48
MCF2L-208ENST00000397030 KATNA1O75449 491 aa18.02■□□□□ 0.48
MCF2L-208ENST00000397030 DEFB115Q30KQ5 88 aa18.02■□□□□ 0.48
MCF2L-208ENST00000397030 PRAMEF19Q5SWL8 479 aa18.02■□□□□ 0.48
MCF2L-208ENST00000397030 GATAD2AQ86YP4 633 aa18.02■□□□□ 0.48
MCF2L-208ENST00000397030 CORO1BQ9BR76 489 aa18.02■□□□□ 0.48
MCF2L-208ENST00000397030 CERS4Q9HA82 394 aa18.02■□□□□ 0.48
MCF2L-208ENST00000397030 UCHL3P15374 230 aa18.02■□□□□ 0.47
MCF2L-208ENST00000397030 ZSCAN2Q7Z7L9 614 aaPredicted RBP18.02■□□□□ 0.47
MCF2L-208ENST00000397030 CENPLQ8N0S6 344 aaPredicted RBP18.02■□□□□ 0.47
MCF2L-208ENST00000397030 MYOCQ99972 504 aa18.02■□□□□ 0.47
MCF2L-208ENST00000397030 KCND2Q9NZV8 630 aa18.02■□□□□ 0.47
MCF2L-208ENST00000397030 CHGBP05060 677 aa18.01■□□□□ 0.47
MCF2L-208ENST00000397030 COMTP21964 271 aa18.01■□□□□ 0.47
MCF2L-208ENST00000397030 CLK2P49760 499 aaKnown RBP18.01■□□□□ 0.47
MCF2L-208ENST00000397030 RCAN1P53805 252 aa18.01■□□□□ 0.47
MCF2L-208ENST00000397030 PSMC3IPQ9P2W1 217 aaPredicted RBP18.01■□□□□ 0.47
MCF2L-208ENST00000397030 UVRAGQ9P2Y5 699 aa18.01■□□□□ 0.47
MCF2L-208ENST00000397030 VTI1BQ9UEU0 232 aa18.01■□□□□ 0.47
MCF2L-208ENST00000397030 HERVK_113P62684 666 aa18.01■□□□□ 0.47
MCF2L-208ENST00000397030 CNGA3Q16281 694 aa18.01■□□□□ 0.47
MCF2L-208ENST00000397030 AP1ARQ63HQ0 302 aa18.01■□□□□ 0.47
MCF2L-208ENST00000397030 PIK3R5Q8WYR1 880 aa18.01■□□□□ 0.47
MCF2L-208ENST00000397030 RIT2Q99578 217 aa18.01■□□□□ 0.47
MCF2L-208ENST00000397030 SPATC1LQ9H0A9 340 aa18.01■□□□□ 0.47
MCF2L-208ENST00000397030 MRPL17Q9NRX2 175 aaKnown RBP18.01■□□□□ 0.47
MCF2L-208ENST00000397030 PNMA6AP0CW24 399 aaPredicted RBP18.01■□□□□ 0.47
MCF2L-208ENST00000397030 TAF13Q15543 124 aa18.01■□□□□ 0.47
MCF2L-208ENST00000397030 CHI3L2Q15782 390 aa18.01■□□□□ 0.47
MCF2L-208ENST00000397030 LRRC8BQ6P9F7 803 aa18.01■□□□□ 0.47
MCF2L-208ENST00000397030 C16orf89Q6UX73 402 aa18.01■□□□□ 0.47
MCF2L-208ENST00000397030 NACC2Q96BF6 587 aa18.01■□□□□ 0.47
MCF2L-208ENST00000397030 TUBGCP3Q96CW5 907 aa18.01■□□□□ 0.47
MCF2L-208ENST00000397030 TRIM9Q9C026 710 aa18.01■□□□□ 0.47
MCF2L-208ENST00000397030 FHDC1Q9C0D6 1143 aaPredicted RBP18.01■□□□□ 0.47
MCF2L-208ENST00000397030 TLL1O43897 1013 aa18.01■□□□□ 0.47
MCF2L-208ENST00000397030 DET1Q7L5Y6 550 aa18.01■□□□□ 0.47
MCF2L-208ENST00000397030 FAM172AQ8WUF8 416 aa18.01■□□□□ 0.47
MCF2L-208ENST00000397030 ANKEF1Q9NU02 776 aa18.01■□□□□ 0.47
MCF2L-208ENST00000397030 ARP10275 920 aa18.01■□□□□ 0.47
MCF2L-208ENST00000397030 RRM2P31350 389 aa18.01■□□□□ 0.47
MCF2L-208ENST00000397030 CEP78Q5JTW2 689 aa18.01■□□□□ 0.47
MCF2L-208ENST00000397030 BARGINQ6ZT62 677 aa18.01■□□□□ 0.47
MCF2L-208ENST00000397030 UNC45BQ8IWX7 931 aa18.01■□□□□ 0.47
MCF2L-208ENST00000397030 SOCS4Q8WXH5 440 aa18.01■□□□□ 0.47
MCF2L-208ENST00000397030 USP7Q93009 1102 aa18.01■□□□□ 0.47
MCF2L-208ENST00000397030 ACOX2Q99424 681 aa18.01■□□□□ 0.47
MCF2L-208ENST00000397030 IL1RAPL1Q9NZN1 696 aa18.01■□□□□ 0.47
MCF2L-208ENST00000397030 H3BRB1 525 aa18.01■□□□□ 0.47
MCF2L-208ENST00000397030 NBNO60934 754 aa18.01■□□□□ 0.47
MCF2L-208ENST00000397030 CRTAMO95727 393 aa18.01■□□□□ 0.47
MCF2L-208ENST00000397030 IFNA16P05015 189 aa18.01■□□□□ 0.47
MCF2L-208ENST00000397030 KRT16P08779 473 aa18.01■□□□□ 0.47
MCF2L-208ENST00000397030 UMPSP11172 480 aa18.01■□□□□ 0.47
MCF2L-208ENST00000397030 CYP20A1Q6UW02 462 aa18.01■□□□□ 0.47
MCF2L-208ENST00000397030 RBBP8Q99708 897 aa18.01■□□□□ 0.47
MCF2L-208ENST00000397030 ASCC2Q9H1I8 757 aaPredicted RBP18.01■□□□□ 0.47
MCF2L-208ENST00000397030 TUT1Q9H6E5 874 aaKnown RBP18.01■□□□□ 0.47
MCF2L-208ENST00000397030 NOP53Q9NZM5 478 aaKnown RBP18.01■□□□□ 0.47
MCF2L-208ENST00000397030 PCDHB2Q9Y5E7 798 aa18.01■□□□□ 0.47
MCF2L-208ENST00000397030 TBX3O15119 743 aa18■□□□□ 0.47
MCF2L-208ENST00000397030 APOA1P02647 267 aa18■□□□□ 0.47
MCF2L-208ENST00000397030 S100A5P33763 92 aa18■□□□□ 0.47
MCF2L-208ENST00000397030 DDX42Q86XP3 938 aaKnown RBP eCLIP18■□□□□ 0.47
MCF2L-208ENST00000397030 LGI2Q8N0V4 545 aa18■□□□□ 0.47
MCF2L-208ENST00000397030 CCT7Q99832 543 aa18■□□□□ 0.47
MCF2L-208ENST00000397030 HTATIP2Q9BUP3 242 aa18■□□□□ 0.47
MCF2L-208ENST00000397030 CUL4AQ13619 759 aa18■□□□□ 0.47
MCF2L-208ENST00000397030 SLC45A4Q5BKX6 768 aa18■□□□□ 0.47
MCF2L-208ENST00000397030 FAM131BQ86XD5 332 aa18■□□□□ 0.47
MCF2L-208ENST00000397030 RNASE11Q8TAA1 199 aaKnown RBP18■□□□□ 0.47
MCF2L-208ENST00000397030 OXCT2Q9BYC2 517 aaPredicted RBP18■□□□□ 0.47
MCF2L-208ENST00000397030 GPN3Q9UHW5 284 aaPredicted RBP18■□□□□ 0.47
MCF2L-208ENST00000397030 FBXO2Q9UK22 296 aaPredicted RBP18■□□□□ 0.47
MCF2L-208ENST00000397030 CXCL8P10145 99 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms