RNA–Protein interactions for RNA: ENST00000396828.8

NEDD8-202, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-202ENST00000396828 TRAV19A0A0A6YYK7 116 aa11□□□□□ -0.65
NEDD8-202ENST00000396828 ZNF233A6NK53 670 aa11□□□□□ -0.65
NEDD8-202ENST00000396828 SOBPA7XYQ1 873 aa11□□□□□ -0.65
NEDD8-202ENST00000396828 CLIC2O15247 247 aa11□□□□□ -0.65
NEDD8-202ENST00000396828 ADRB1P08588 477 aa11□□□□□ -0.65
NEDD8-202ENST00000396828 USP17L7P0C7H9 530 aa11□□□□□ -0.65
NEDD8-202ENST00000396828 HDCP19113 662 aa11□□□□□ -0.65
NEDD8-202ENST00000396828 DRD1P21728 446 aa11□□□□□ -0.65
NEDD8-202ENST00000396828 PMS1P54277 932 aaKnown RBP11□□□□□ -0.65
NEDD8-202ENST00000396828 FKBP3Q00688 224 aaKnown RBP11□□□□□ -0.65
NEDD8-202ENST00000396828 MESP2Q0VG99 397 aa11□□□□□ -0.65
NEDD8-202ENST00000396828 PDGFRLQ15198 375 aa11□□□□□ -0.65
NEDD8-202ENST00000396828 TCEAL6Q6IPX3 200 aa11□□□□□ -0.65
NEDD8-202ENST00000396828 TRAPPC11Q7Z392 1133 aa11□□□□□ -0.65
NEDD8-202ENST00000396828 TCEAL3Q969E4 200 aa11□□□□□ -0.65
NEDD8-202ENST00000396828 PCED1BQ96HM7 432 aa11□□□□□ -0.65
NEDD8-202ENST00000396828 FUBP3Q96I24 572 aaKnown RBP eCLIP11□□□□□ -0.65
NEDD8-202ENST00000396828 ANKRD36BP1Q96IX9 119 aa11□□□□□ -0.65
NEDD8-202ENST00000396828 MED15Q96RN5 788 aa11□□□□□ -0.65
NEDD8-202ENST00000396828 SRRTQ9BXP5 876 aaKnown RBP11□□□□□ -0.65
NEDD8-202ENST00000396828 KCTD10Q9H3F6 313 aa11□□□□□ -0.65
NEDD8-202ENST00000396828 DPEP3Q9H4B8 488 aa11□□□□□ -0.65
NEDD8-202ENST00000396828 UXTQ9UBK9 157 aaPredicted RBP11□□□□□ -0.65
NEDD8-202ENST00000396828 SLC8A2Q9UPR5 921 aa11□□□□□ -0.65
NEDD8-202ENST00000396828 TRAF3IP3Q9Y228 551 aa11□□□□□ -0.65
NEDD8-202ENST00000396828 INVSQ9Y283 1065 aa11□□□□□ -0.65
NEDD8-202ENST00000396828 AKAP13Q12802 2813 aa11□□□□□ -0.65
NEDD8-202ENST00000396828 CHD6Q8TD26 2715 aa11□□□□□ -0.65
NEDD8-202ENST00000396828 MYOFQ9NZM1 2061 aa10.99□□□□□ -0.65
NEDD8-202ENST00000396828 ABCA7Q8IZY2 2146 aa10.99□□□□□ -0.65
NEDD8-202ENST00000396828 CCDC163A0A0D9SF12 145 aa10.99□□□□□ -0.65
NEDD8-202ENST00000396828 K7EQS6 105 aa10.99□□□□□ -0.65
NEDD8-202ENST00000396828 TM4SF5O14894 197 aa10.99□□□□□ -0.65
NEDD8-202ENST00000396828 CETN3O15182 167 aa10.99□□□□□ -0.65
NEDD8-202ENST00000396828 EPN2O95208 641 aa10.99□□□□□ -0.65
NEDD8-202ENST00000396828 GNA14O95837 355 aa10.99□□□□□ -0.65
NEDD8-202ENST00000396828 TPM2P07951 284 aa10.99□□□□□ -0.65
NEDD8-202ENST00000396828 ZNF806P0C7X5 589 aa10.99□□□□□ -0.65
NEDD8-202ENST00000396828 DLATP10515 647 aaKnown RBP10.99□□□□□ -0.65
NEDD8-202ENST00000396828 WARSP23381 471 aaKnown RBP10.99□□□□□ -0.65
NEDD8-202ENST00000396828 PCSK1P29120 753 aa10.99□□□□□ -0.65
NEDD8-202ENST00000396828 GRIK1P39086 918 aa10.99□□□□□ -0.65
NEDD8-202ENST00000396828 OPRD1P41143 372 aa10.99□□□□□ -0.65
NEDD8-202ENST00000396828 MAGEA11P43364 429 aa10.99□□□□□ -0.65
NEDD8-202ENST00000396828 CYP27A1Q02318 531 aa10.99□□□□□ -0.65
NEDD8-202ENST00000396828 MYO1EQ12965 1108 aa10.99□□□□□ -0.65
NEDD8-202ENST00000396828 ADAM9Q13443 819 aa10.99□□□□□ -0.65
NEDD8-202ENST00000396828 SNRNP35Q16560 246 aaKnown RBP10.99□□□□□ -0.65
NEDD8-202ENST00000396828 DUOXA2Q1HG44 320 aa10.99□□□□□ -0.65
NEDD8-202ENST00000396828 PLK5Q496M5 336 aa10.99□□□□□ -0.65
NEDD8-202ENST00000396828 ZCWPW2Q504Y3 356 aa10.99□□□□□ -0.65
NEDD8-202ENST00000396828 MDH1BQ5I0G3 518 aa10.99□□□□□ -0.65
NEDD8-202ENST00000396828 PLA2G2CQ5R387 149 aa10.99□□□□□ -0.65
NEDD8-202ENST00000396828 DPH6Q7L8W6 267 aa10.99□□□□□ -0.65
NEDD8-202ENST00000396828 CACNA2D4Q7Z3S7 1137 aa10.99□□□□□ -0.65
NEDD8-202ENST00000396828 CREBRFQ8IUR6 639 aa10.99□□□□□ -0.65
NEDD8-202ENST00000396828 CPA6Q8N4T0 437 aa10.99□□□□□ -0.65
NEDD8-202ENST00000396828 MYCBPAPQ8TBZ2 947 aa10.99□□□□□ -0.65
NEDD8-202ENST00000396828 SPATA18Q8TC71 538 aa10.99□□□□□ -0.65
NEDD8-202ENST00000396828 CD101Q93033 1021 aa10.99□□□□□ -0.65
NEDD8-202ENST00000396828 CCDC127Q96BQ5 260 aa10.99□□□□□ -0.65
NEDD8-202ENST00000396828 CEP63Q96MT8 703 aa10.99□□□□□ -0.65
NEDD8-202ENST00000396828 MMS19Q96T76 1030 aa10.99□□□□□ -0.65
NEDD8-202ENST00000396828 DUSP9Q99956 384 aaKnown RBP10.99□□□□□ -0.65
NEDD8-202ENST00000396828 DUSP15Q9H1R2 295 aaPredicted RBP10.99□□□□□ -0.65
NEDD8-202ENST00000396828 AGPAT3Q9NRZ7 376 aa10.99□□□□□ -0.65
NEDD8-202ENST00000396828 SAMSN1Q9NSI8 373 aaKnown RBP10.99□□□□□ -0.65
NEDD8-202ENST00000396828 CDH9Q9ULB4 789 aa10.99□□□□□ -0.65
NEDD8-202ENST00000396828 ZNF840PA6NDX5 716 aa10.98□□□□□ -0.65
NEDD8-202ENST00000396828 KCNJ18B7U540 433 aa10.98□□□□□ -0.65
NEDD8-202ENST00000396828 F8VP50 259 aa10.98□□□□□ -0.65
NEDD8-202ENST00000396828 LEFTY2O00292 366 aa10.98□□□□□ -0.65
NEDD8-202ENST00000396828 CLDN5O00501 218 aa10.98□□□□□ -0.65
NEDD8-202ENST00000396828 ATG13O75143 517 aa10.98□□□□□ -0.65
NEDD8-202ENST00000396828 SERPINC1P01008 464 aa10.98□□□□□ -0.65
NEDD8-202ENST00000396828 TNNC2P02585 160 aa10.98□□□□□ -0.65
NEDD8-202ENST00000396828 NR3C1P04150 777 aa10.98□□□□□ -0.65
NEDD8-202ENST00000396828 TPM3P06753 285 aa10.98□□□□□ -0.65
NEDD8-202ENST00000396828 HNRNPLP14866 589 aaKnown RBP eCLIP10.98□□□□□ -0.65
NEDD8-202ENST00000396828 NR2F2P24468 414 aa10.98□□□□□ -0.65
NEDD8-202ENST00000396828 EEF1GP26641 437 aaKnown RBP10.98□□□□□ -0.65
NEDD8-202ENST00000396828 GNL1P36915 607 aaPredicted RBP10.98□□□□□ -0.65
NEDD8-202ENST00000396828 SLC6A11P48066 632 aa10.98□□□□□ -0.65
NEDD8-202ENST00000396828 IFNAR2P48551 515 aa10.98□□□□□ -0.65
NEDD8-202ENST00000396828 CASP4P49662 377 aa10.98□□□□□ -0.65
NEDD8-202ENST00000396828 CYP2J2P51589 502 aa10.98□□□□□ -0.65
NEDD8-202ENST00000396828 CDH8P55286 799 aa10.98□□□□□ -0.65
NEDD8-202ENST00000396828 SEC13P55735 322 aa10.98□□□□□ -0.65
NEDD8-202ENST00000396828 KCNJ12Q14500 433 aa10.98□□□□□ -0.65
NEDD8-202ENST00000396828 DMC1Q14565 340 aa10.98□□□□□ -0.65
NEDD8-202ENST00000396828 NFIL3Q16649 462 aa10.98□□□□□ -0.65
NEDD8-202ENST00000396828 AASDHQ4L235 1098 aaPredicted RBP10.98□□□□□ -0.65
NEDD8-202ENST00000396828 CDKAL1Q5VV42 579 aa10.98□□□□□ -0.65
NEDD8-202ENST00000396828 C4orf50Q6ZRC1 276 aa10.98□□□□□ -0.65
NEDD8-202ENST00000396828 DENND5BQ6ZUT9 1274 aa10.98□□□□□ -0.65
NEDD8-202ENST00000396828 SYT13Q7L8C5 426 aa10.98□□□□□ -0.65
NEDD8-202ENST00000396828 WDR49Q8IV35 697 aa10.98□□□□□ -0.65
NEDD8-202ENST00000396828 CAMKK1Q8N5S9 505 aa10.98□□□□□ -0.65
NEDD8-202ENST00000396828 PLEKHO2Q8TD55 490 aa10.98□□□□□ -0.65
NEDD8-202ENST00000396828 ZC3H10Q96K80 434 aaKnown RBP10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms