RNA–Protein interactions for RNA: ENST00000396625.3

COL4A4-201, Transcript of collagen type IV alpha 4 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A4, Length 9,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A4-201ENST00000396625 RXRGP48443 463 aa10.65□□□□□ -0.7
COL4A4-201ENST00000396625 TAF13Q15543 124 aa10.65□□□□□ -0.7
COL4A4-201ENST00000396625 PPP1R18Q6NYC8 613 aa10.65□□□□□ -0.7
COL4A4-201ENST00000396625 STK33Q9BYT3 514 aa10.65□□□□□ -0.7
COL4A4-201ENST00000396625 ING4Q9UNL4 249 aa10.65□□□□□ -0.7
COL4A4-201ENST00000396625 TTC37Q6PGP7 1564 aa10.65□□□□□ -0.7
COL4A4-201ENST00000396625 ERVK-10P10266 1014 aa10.65□□□□□ -0.7
COL4A4-201ENST00000396625 ARHGDIBP52566 201 aa10.65□□□□□ -0.7
COL4A4-201ENST00000396625 ZNF438Q7Z4V0 828 aa10.65□□□□□ -0.7
COL4A4-201ENST00000396625 SETD9Q8NE22 299 aa10.65□□□□□ -0.7
COL4A4-201ENST00000396625 FAM118BQ9BPY3 351 aa10.65□□□□□ -0.7
COL4A4-201ENST00000396625 KCTD10Q9H3F6 313 aa10.65□□□□□ -0.7
COL4A4-201ENST00000396625 MIEF1Q9NQG6 463 aa10.65□□□□□ -0.7
COL4A4-201ENST00000396625 CMTM6Q9NX76 183 aa10.65□□□□□ -0.7
COL4A4-201ENST00000396625 TBC1D12O60347 775 aa10.65□□□□□ -0.7
COL4A4-201ENST00000396625 KLHL41O60662 606 aa10.65□□□□□ -0.7
COL4A4-201ENST00000396625 CNPP09543 421 aaKnown RBP10.65□□□□□ -0.7
COL4A4-201ENST00000396625 ITGADQ13349 1161 aa10.65□□□□□ -0.7
COL4A4-201ENST00000396625 CCDC153Q494R4 210 aa10.65□□□□□ -0.7
COL4A4-201ENST00000396625 ABRAXAS1Q6UWZ7 409 aa10.65□□□□□ -0.7
COL4A4-201ENST00000396625 MTDHQ86UE4 582 aaKnown RBP10.65□□□□□ -0.7
COL4A4-201ENST00000396625 PPP1R10Q96QC0 940 aaKnown RBP10.65□□□□□ -0.7
COL4A4-201ENST00000396625 LEMD3Q9Y2U8 911 aa10.65□□□□□ -0.7
COL4A4-201ENST00000396625 TM9SF1O15321 606 aa10.65□□□□□ -0.7
COL4A4-201ENST00000396625 ATMINO43313 823 aaPredicted RBP10.65□□□□□ -0.7
COL4A4-201ENST00000396625 PRKAB2O43741 272 aa10.65□□□□□ -0.7
COL4A4-201ENST00000396625 KPNA6O60684 536 aa10.65□□□□□ -0.7
COL4A4-201ENST00000396625 GRK3P35626 688 aa10.65□□□□□ -0.7
COL4A4-201ENST00000396625 RSAD1Q9HA92 442 aa10.65□□□□□ -0.7
COL4A4-201ENST00000396625 STAP2Q9UGK3 403 aa10.65□□□□□ -0.7
COL4A4-201ENST00000396625 PTPRTO14522 1441 aa10.65□□□□□ -0.7
COL4A4-201ENST00000396625 HS6ST1O60243 411 aa10.65□□□□□ -0.7
COL4A4-201ENST00000396625 SEC24CP53992 1094 aa10.65□□□□□ -0.7
COL4A4-201ENST00000396625 NFYCQ13952 458 aa10.65□□□□□ -0.7
COL4A4-201ENST00000396625 CNKSR1Q969H4 720 aa10.65□□□□□ -0.7
COL4A4-201ENST00000396625 STAU1O95793 577 aaKnown RBP10.65□□□□□ -0.71
COL4A4-201ENST00000396625 YY1P25490 414 aa10.65□□□□□ -0.71
COL4A4-201ENST00000396625 CRKP46108 304 aa10.65□□□□□ -0.71
COL4A4-201ENST00000396625 NR1D2Q14995 579 aa10.65□□□□□ -0.71
COL4A4-201ENST00000396625 SLC18A3Q16572 532 aa10.65□□□□□ -0.71
COL4A4-201ENST00000396625 ATG14Q6ZNE5 492 aa10.65□□□□□ -0.71
COL4A4-201ENST00000396625 KYQ8NBH2 561 aa10.65□□□□□ -0.71
COL4A4-201ENST00000396625 KCNB2Q92953 911 aa10.65□□□□□ -0.71
COL4A4-201ENST00000396625 MED8Q96G25 268 aa10.65□□□□□ -0.71
COL4A4-201ENST00000396625 FAM49BQ9NUQ9 324 aa10.65□□□□□ -0.71
COL4A4-201ENST00000396625 ARHGEF5Q12774 1597 aa10.65□□□□□ -0.71
COL4A4-201ENST00000396625 IRF1P10914 325 aa10.65□□□□□ -0.71
COL4A4-201ENST00000396625 MTF1Q14872 753 aa10.65□□□□□ -0.71
COL4A4-201ENST00000396625 EFHC1Q5JVL4 640 aa10.65□□□□□ -0.71
COL4A4-201ENST00000396625 OR6Y1Q8NGX8 325 aa10.65□□□□□ -0.71
COL4A4-201ENST00000396625 EVPLQ92817 2033 aa10.65□□□□□ -0.71
COL4A4-201ENST00000396625 ZNF669Q96BR6 464 aaPredicted RBP10.65□□□□□ -0.71
COL4A4-201ENST00000396625 LRCH1Q9Y2L9 728 aa10.65□□□□□ -0.71
COL4A4-201ENST00000396625 TXNRD1Q16881 649 aa10.64□□□□□ -0.71
COL4A4-201ENST00000396625 GATAD2AQ86YP4 633 aa10.64□□□□□ -0.71
COL4A4-201ENST00000396625 SAMD3Q8N6K7 520 aa10.64□□□□□ -0.71
COL4A4-201ENST00000396625 VAV1P15498 845 aa10.64□□□□□ -0.71
COL4A4-201ENST00000396625 PTPN1P18031 435 aaKnown RBP10.64□□□□□ -0.71
COL4A4-201ENST00000396625 DENND1BQ6P3S1 775 aa10.64□□□□□ -0.71
COL4A4-201ENST00000396625 LRRC74BQ6ZQY2 392 aa10.64□□□□□ -0.71
COL4A4-201ENST00000396625 CCDC36Q8IYA8 594 aa10.64□□□□□ -0.71
COL4A4-201ENST00000396625 DEFB107AQ8IZN7 70 aa10.64□□□□□ -0.71
COL4A4-201ENST00000396625 TRPV3Q8NET8 790 aa10.64□□□□□ -0.71
COL4A4-201ENST00000396625 ZNF512Q96ME7 567 aaPredicted RBP10.64□□□□□ -0.71
COL4A4-201ENST00000396625 ZIM3Q96PE6 472 aa10.64□□□□□ -0.71
COL4A4-201ENST00000396625 GABBR1Q9UBS5 961 aa10.64□□□□□ -0.71
COL4A4-201ENST00000396625 PCDHA6Q9UN73 950 aa10.64□□□□□ -0.71
COL4A4-201ENST00000396625 PCDHA8Q9Y5H6 950 aa10.64□□□□□ -0.71
COL4A4-201ENST00000396625 C2orf81A6NN90 581 aa10.64□□□□□ -0.71
COL4A4-201ENST00000396625 O00370 1275 aa10.64□□□□□ -0.71
COL4A4-201ENST00000396625 TTLL9Q3SXZ7 439 aa10.64□□□□□ -0.71
COL4A4-201ENST00000396625 PYDC2Q56P42 97 aa10.64□□□□□ -0.71
COL4A4-201ENST00000396625 SLC9A6Q92581 669 aa10.64□□□□□ -0.71
COL4A4-201ENST00000396625 TPRKBQ9Y3C4 175 aa10.64□□□□□ -0.71
COL4A4-201ENST00000396625 PSMD12O00232 456 aaPredicted RBP10.64□□□□□ -0.71
COL4A4-201ENST00000396625 ECE2O60344 883 aa10.64□□□□□ -0.71
COL4A4-201ENST00000396625 HSD17B3P37058 310 aa10.64□□□□□ -0.71
COL4A4-201ENST00000396625 SNX17Q15036 470 aa10.64□□□□□ -0.71
COL4A4-201ENST00000396625 EIF2S3LQ2VIR3 472 aaKnown RBP10.64□□□□□ -0.71
COL4A4-201ENST00000396625 TBCELQ5QJ74 424 aa10.64□□□□□ -0.71
COL4A4-201ENST00000396625 SNRNP48Q6IEG0 339 aaKnown RBP10.64□□□□□ -0.71
COL4A4-201ENST00000396625 RXFP1Q9HBX9 757 aa10.64□□□□□ -0.71
COL4A4-201ENST00000396625 NPR3P17342 541 aa10.64□□□□□ -0.71
COL4A4-201ENST00000396625 MZT2AQ6P582 158 aa10.64□□□□□ -0.71
COL4A4-201ENST00000396625 FAM220AQ7Z4H9 259 aa10.64□□□□□ -0.71
COL4A4-201ENST00000396625 EPS8L3Q8TE67 593 aaKnown RBP10.64□□□□□ -0.71
COL4A4-201ENST00000396625 JPH1Q9HDC5 661 aaPredicted RBP10.64□□□□□ -0.71
COL4A4-201ENST00000396625 TRPM5Q9NZQ8 1165 aa10.64□□□□□ -0.71
COL4A4-201ENST00000396625 ATP10BO94823 1461 aa10.64□□□□□ -0.71
COL4A4-201ENST00000396625 WWP2O00308 870 aa10.64□□□□□ -0.71
COL4A4-201ENST00000396625 SLC29A2Q14542 456 aa10.64□□□□□ -0.71
COL4A4-201ENST00000396625 OTUD3Q5T2D3 398 aaPredicted RBP10.64□□□□□ -0.71
COL4A4-201ENST00000396625 KDM7AQ6ZMT4 941 aa10.64□□□□□ -0.71
COL4A4-201ENST00000396625 PUS7LQ9H0K6 701 aaKnown RBP10.64□□□□□ -0.71
COL4A4-201ENST00000396625 FEM1BQ9UK73 627 aa10.64□□□□□ -0.71
COL4A4-201ENST00000396625 PRRG1O14668 218 aa10.64□□□□□ -0.71
COL4A4-201ENST00000396625 MTSS1O43312 755 aa10.64□□□□□ -0.71
COL4A4-201ENST00000396625 P4HBP07237 508 aaKnown RBP10.64□□□□□ -0.71
COL4A4-201ENST00000396625 FGRP09769 529 aa10.64□□□□□ -0.71
COL4A4-201ENST00000396625 FASP25445 335 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms