RNA–Protein interactions for RNA: ENST00000396551.7

TRIM39-205, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,249 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-205ENST00000396551 USP15Q9Y4E8 981 aaPredicted RBP17.3■□□□□ 0.36
TRIM39-205ENST00000396551 TRIP12Q14669 1992 aaPredicted RBP17.3■□□□□ 0.36
TRIM39-205ENST00000396551 DOCK3Q8IZD9 2030 aa17.3■□□□□ 0.36
TRIM39-205ENST00000396551 RRN3P2A6NIE6 340 aa17.3■□□□□ 0.36
TRIM39-205ENST00000396551 PAPSS1O43252 624 aaPredicted RBP17.3■□□□□ 0.36
TRIM39-205ENST00000396551 SMIM10L2AP0DMW4 78 aa17.3■□□□□ 0.36
TRIM39-205ENST00000396551 SMIM10L2BP0DMW5 78 aa17.3■□□□□ 0.36
TRIM39-205ENST00000396551 TAC1P20366 129 aa17.3■□□□□ 0.36
TRIM39-205ENST00000396551 ROR1Q01973 937 aa17.3■□□□□ 0.36
TRIM39-205ENST00000396551 PRAMEF19Q5SWL8 479 aa17.3■□□□□ 0.36
TRIM39-205ENST00000396551 ALKAL1Q6UXT8 129 aa17.3■□□□□ 0.36
TRIM39-205ENST00000396551 PPP1R21Q6ZMI0 780 aa17.3■□□□□ 0.36
TRIM39-205ENST00000396551 TMEM110Q86TL2 294 aa17.3■□□□□ 0.36
TRIM39-205ENST00000396551 SCUBE3Q8IX30 993 aa17.3■□□□□ 0.36
TRIM39-205ENST00000396551 FBXO36Q8NEA4 188 aa17.3■□□□□ 0.36
TRIM39-205ENST00000396551 PYROXD1Q8WU10 500 aa17.3■□□□□ 0.36
TRIM39-205ENST00000396551 MAK16Q9BXY0 300 aaKnown RBP17.3■□□□□ 0.36
TRIM39-205ENST00000396551 B3GNT5Q9BYG0 378 aa17.3■□□□□ 0.36
TRIM39-205ENST00000396551 MIS12Q9H081 205 aa17.3■□□□□ 0.36
TRIM39-205ENST00000396551 SLC24A2Q9UI40 661 aa17.3■□□□□ 0.36
TRIM39-205ENST00000396551 CLEC11AQ9Y240 323 aa17.3■□□□□ 0.36
TRIM39-205ENST00000396551 A0A1W2PPM1 405 aa17.29■□□□□ 0.36
TRIM39-205ENST00000396551 RASSF9O75901 435 aa17.29■□□□□ 0.36
TRIM39-205ENST00000396551 PIAS1O75925 651 aa17.29■□□□□ 0.36
TRIM39-205ENST00000396551 ASMTLO95671 621 aa17.29■□□□□ 0.36
TRIM39-205ENST00000396551 SLC6A3Q01959 620 aa17.29■□□□□ 0.36
TRIM39-205ENST00000396551 CA9Q16790 459 aa17.29■□□□□ 0.36
TRIM39-205ENST00000396551 DARS2Q6PI48 645 aaKnown RBP17.29■□□□□ 0.36
TRIM39-205ENST00000396551 C1orf228Q6PIY5 440 aa17.29■□□□□ 0.36
TRIM39-205ENST00000396551 TRPM8Q7Z2W7 1104 aa17.29■□□□□ 0.36
TRIM39-205ENST00000396551 C4orf33Q8N1A6 199 aa17.29■□□□□ 0.36
TRIM39-205ENST00000396551 SLC40A1Q9NP59 571 aa17.29■□□□□ 0.36
TRIM39-205ENST00000396551 NGRNQ9NPE2 291 aaKnown RBP17.29■□□□□ 0.36
TRIM39-205ENST00000396551 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.29■□□□□ 0.36
TRIM39-205ENST00000396551 UNCXA6NJT0 531 aa17.29■□□□□ 0.36
TRIM39-205ENST00000396551 PRPF4O43172 522 aaKnown RBP eCLIP17.29■□□□□ 0.36
TRIM39-205ENST00000396551 DYNC1LI2O43237 492 aaPredicted RBP17.29■□□□□ 0.36
TRIM39-205ENST00000396551 BASP1P80723 227 aaKnown RBP17.29■□□□□ 0.36
TRIM39-205ENST00000396551 RASA2Q15283 850 aa17.29■□□□□ 0.36
TRIM39-205ENST00000396551 SOWAHAQ2M3V2 549 aa17.29■□□□□ 0.36
TRIM39-205ENST00000396551 SCYL2Q6P3W7 929 aa17.29■□□□□ 0.36
TRIM39-205ENST00000396551 PQLC3Q8N755 202 aa17.29■□□□□ 0.36
TRIM39-205ENST00000396551 FAM172AQ8WUF8 416 aa17.29■□□□□ 0.36
TRIM39-205ENST00000396551 SGSM3Q96HU1 749 aa17.29■□□□□ 0.36
TRIM39-205ENST00000396551 PSMC3IPQ9P2W1 217 aaPredicted RBP17.29■□□□□ 0.36
TRIM39-205ENST00000396551 RECQL4O94761 1208 aa17.28■□□□□ 0.36
TRIM39-205ENST00000396551 ECM2O94769 699 aaPredicted RBP17.28■□□□□ 0.36
TRIM39-205ENST00000396551 KRT15P19012 456 aa17.28■□□□□ 0.36
TRIM39-205ENST00000396551 TFE3P19532 575 aaPredicted RBP17.28■□□□□ 0.36
TRIM39-205ENST00000396551 C9orf57Q5W0N0 161 aa17.28■□□□□ 0.36
TRIM39-205ENST00000396551 LRRC52Q8N7C0 313 aa17.28■□□□□ 0.36
TRIM39-205ENST00000396551 ATP11CQ8NB49 1132 aa17.28■□□□□ 0.36
TRIM39-205ENST00000396551 PCDH18Q9HCL0 1135 aa17.28■□□□□ 0.36
TRIM39-205ENST00000396551 CNTN3Q9P232 1028 aa17.28■□□□□ 0.36
TRIM39-205ENST00000396551 GRID1Q9ULK0 1009 aa17.28■□□□□ 0.36
TRIM39-205ENST00000396551 SLC12A4Q9UP95 1085 aa17.28■□□□□ 0.36
TRIM39-205ENST00000396551 SETSIPP0DME0 302 aa17.28■□□□□ 0.36
TRIM39-205ENST00000396551 AKAP5P24588 427 aa17.28■□□□□ 0.36
TRIM39-205ENST00000396551 BBS9Q3SYG4 887 aa17.28■□□□□ 0.36
TRIM39-205ENST00000396551 IGDCC3Q8IVU1 814 aa17.28■□□□□ 0.36
TRIM39-205ENST00000396551 PLD5Q8N7P1 536 aa17.28■□□□□ 0.36
TRIM39-205ENST00000396551 BEST2Q8NFU1 509 aa17.28■□□□□ 0.36
TRIM39-205ENST00000396551 LENG1Q96BZ8 264 aaPredicted RBP17.28■□□□□ 0.36
TRIM39-205ENST00000396551 SNRNP25Q9BV90 132 aaKnown RBP17.28■□□□□ 0.36
TRIM39-205ENST00000396551 USP29Q9HBJ7 922 aa17.28■□□□□ 0.36
TRIM39-205ENST00000396551 GGT7Q9UJ14 662 aa17.28■□□□□ 0.36
TRIM39-205ENST00000396551 ZNF236Q9UL36 1845 aa17.28■□□□□ 0.36
TRIM39-205ENST00000396551 F2P00734 622 aa17.28■□□□□ 0.36
TRIM39-205ENST00000396551 DARSP14868 501 aaKnown RBP17.28■□□□□ 0.36
TRIM39-205ENST00000396551 GEMIN4P57678 1058 aaKnown RBP17.28■□□□□ 0.36
TRIM39-205ENST00000396551 TFDP2Q14188 446 aa17.28■□□□□ 0.36
TRIM39-205ENST00000396551 KRT81Q14533 505 aa17.28■□□□□ 0.36
TRIM39-205ENST00000396551 FAM47CQ5HY64 1035 aa17.28■□□□□ 0.36
TRIM39-205ENST00000396551 NOTUMQ6P988 496 aa17.28■□□□□ 0.36
TRIM39-205ENST00000396551 C3orf62Q6ZUJ4 267 aa17.28■□□□□ 0.36
TRIM39-205ENST00000396551 OR6B3Q8NGW1 331 aa17.28■□□□□ 0.36
TRIM39-205ENST00000396551 FBF1Q8TES7 1133 aa17.28■□□□□ 0.36
TRIM39-205ENST00000396551 CLEC4CQ8WTT0 213 aa17.28■□□□□ 0.36
TRIM39-205ENST00000396551 TMEM40Q8WWA1 233 aa17.28■□□□□ 0.36
TRIM39-205ENST00000396551 DHRS4Q9BTZ2 278 aa17.28■□□□□ 0.36
TRIM39-205ENST00000396551 APOL6Q9BWW8 343 aa17.28■□□□□ 0.36
TRIM39-205ENST00000396551 HAUS2Q9NVX0 235 aa17.28■□□□□ 0.36
TRIM39-205ENST00000396551 PRKAG3Q9UGI9 489 aa17.28■□□□□ 0.36
TRIM39-205ENST00000396551 A6NJR5 290 aa17.27■□□□□ 0.36
TRIM39-205ENST00000396551 FGFR1P11362 822 aa17.27■□□□□ 0.36
TRIM39-205ENST00000396551 YARSP54577 528 aaKnown RBP17.27■□□□□ 0.36
TRIM39-205ENST00000396551 KCNJ11Q14654 390 aa17.27■□□□□ 0.36
TRIM39-205ENST00000396551 FAM110CQ1W6H9 321 aa17.27■□□□□ 0.36
TRIM39-205ENST00000396551 SPATA21Q7Z572 469 aa17.27■□□□□ 0.36
TRIM39-205ENST00000396551 PCDH19Q8TAB3 1148 aa17.27■□□□□ 0.36
TRIM39-205ENST00000396551 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.27■□□□□ 0.36
TRIM39-205ENST00000396551 MBLAC1A4D2B0 266 aaPredicted RBP17.27■□□□□ 0.36
TRIM39-205ENST00000396551 IQCA1LA6NCM1 817 aa17.27■□□□□ 0.36
TRIM39-205ENST00000396551 DNAJC8O75937 253 aaPredicted RBP17.27■□□□□ 0.36
TRIM39-205ENST00000396551 CYP2C9P11712 490 aa17.27■□□□□ 0.36
TRIM39-205ENST00000396551 STIP1P31948 543 aaKnown RBP17.27■□□□□ 0.36
TRIM39-205ENST00000396551 RPA3P35244 121 aaPredicted RBP17.27■□□□□ 0.36
TRIM39-205ENST00000396551 HDAC4P56524 1084 aa17.27■□□□□ 0.36
TRIM39-205ENST00000396551 SYCP2LQ5T4T6 812 aa17.27■□□□□ 0.36
TRIM39-205ENST00000396551 ARHGAP17Q68EM7 881 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms