RNA–Protein interactions for RNA: ENST00000396527.7

EIF4A1-202, Transcript of eukaryotic translation initiation factor 4A1, humanhuman

TSL 2

Gene EIF4A1, Length 1,169 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A1-202ENST00000396527 USP18Q9UMW8 372 aa8.13□□□□□ -1.11
EIF4A1-202ENST00000396527 PCDHB8Q9UN66 801 aa8.13□□□□□ -1.11
EIF4A1-202ENST00000396527 SHOC2Q9UQ13 582 aa8.13□□□□□ -1.11
EIF4A1-202ENST00000396527 ATP11BQ9Y2G3 1177 aa8.13□□□□□ -1.11
EIF4A1-202ENST00000396527 CEP290O15078 2479 aa8.13□□□□□ -1.11
EIF4A1-202ENST00000396527 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.12□□□□□ -1.11
EIF4A1-202ENST00000396527 A0A087WUV0 522 aaPredicted RBP8.12□□□□□ -1.11
EIF4A1-202ENST00000396527 SMIM28A0A1B0GU29 152 aa8.12□□□□□ -1.11
EIF4A1-202ENST00000396527 ZNF487B1APH4 448 aa8.12□□□□□ -1.11
EIF4A1-202ENST00000396527 E7EVH7 732 aa8.12□□□□□ -1.11
EIF4A1-202ENST00000396527 XPOTO43592 962 aaKnown RBP8.12□□□□□ -1.11
EIF4A1-202ENST00000396527 ACSL3O95573 720 aa8.12□□□□□ -1.11
EIF4A1-202ENST00000396527 PGK1P00558 417 aa8.12□□□□□ -1.11
EIF4A1-202ENST00000396527 ZSCAN5DPP0CG00 497 aa8.12□□□□□ -1.11
EIF4A1-202ENST00000396527 GNAT1P11488 350 aa8.12□□□□□ -1.11
EIF4A1-202ENST00000396527 CHN1P15882 459 aa8.12□□□□□ -1.11
EIF4A1-202ENST00000396527 PDGFRAP16234 1089 aa8.12□□□□□ -1.11
EIF4A1-202ENST00000396527 TSHRP16473 764 aa8.12□□□□□ -1.11
EIF4A1-202ENST00000396527 HOXC8P31273 242 aa8.12□□□□□ -1.11
EIF4A1-202ENST00000396527 STIP1P31948 543 aaKnown RBP8.12□□□□□ -1.11
EIF4A1-202ENST00000396527 PNPLA4P41247 253 aa8.12□□□□□ -1.11
EIF4A1-202ENST00000396527 CPT1AP50416 773 aa8.12□□□□□ -1.11
EIF4A1-202ENST00000396527 EMP3P54852 163 aa8.12□□□□□ -1.11
EIF4A1-202ENST00000396527 OTUD4Q01804 1114 aaKnown RBP8.12□□□□□ -1.11
EIF4A1-202ENST00000396527 SLC6A3Q01959 620 aa8.12□□□□□ -1.11
EIF4A1-202ENST00000396527 PLCB3Q01970 1234 aa8.12□□□□□ -1.11
EIF4A1-202ENST00000396527 GPS1Q13098 491 aa8.12□□□□□ -1.11
EIF4A1-202ENST00000396527 NR1H3Q13133 447 aa8.12□□□□□ -1.11
EIF4A1-202ENST00000396527 TFDP2Q14188 446 aa8.12□□□□□ -1.11
EIF4A1-202ENST00000396527 HIC1Q14526 733 aa8.12□□□□□ -1.11
EIF4A1-202ENST00000396527 SNX17Q15036 470 aa8.12□□□□□ -1.11
EIF4A1-202ENST00000396527 RASA2Q15283 850 aa8.12□□□□□ -1.11
EIF4A1-202ENST00000396527 SKIDA1Q1XH10 827 aa8.12□□□□□ -1.11
EIF4A1-202ENST00000396527 SOWAHAQ2M3V2 549 aa8.12□□□□□ -1.11
EIF4A1-202ENST00000396527 GOLGA7BQ2TAP0 167 aa8.12□□□□□ -1.11
EIF4A1-202ENST00000396527 CCDC14Q49A88 953 aa8.12□□□□□ -1.11
EIF4A1-202ENST00000396527 FAM47CQ5HY64 1035 aa8.12□□□□□ -1.11
EIF4A1-202ENST00000396527 UBXN11Q5T124 520 aa8.12□□□□□ -1.11
EIF4A1-202ENST00000396527 FAM102AQ5T9C2 384 aaPredicted RBP8.12□□□□□ -1.11
EIF4A1-202ENST00000396527 RNASEH2BQ5TBB1 312 aaKnown RBP8.12□□□□□ -1.11
EIF4A1-202ENST00000396527 OR6B2Q6IFH4 312 aa8.12□□□□□ -1.11
EIF4A1-202ENST00000396527 C6orf89Q6UWU4 347 aa8.12□□□□□ -1.11
EIF4A1-202ENST00000396527 SLC39A5Q6ZMH5 540 aa8.12□□□□□ -1.11
EIF4A1-202ENST00000396527 FAM183BPQ6ZVS7 135 aa8.12□□□□□ -1.11
EIF4A1-202ENST00000396527 YTHDF3Q7Z739 585 aaKnown RBP8.12□□□□□ -1.11
EIF4A1-202ENST00000396527 ACOT1Q86TX2 421 aa8.12□□□□□ -1.11
EIF4A1-202ENST00000396527 SESTD1Q86VW0 696 aa8.12□□□□□ -1.11
EIF4A1-202ENST00000396527 TDRPQ86YL5 185 aa8.12□□□□□ -1.11
EIF4A1-202ENST00000396527 MAP7D3Q8IWC1 876 aa8.12□□□□□ -1.11
EIF4A1-202ENST00000396527 TDHQ8IZJ6 230 aa8.12□□□□□ -1.11
EIF4A1-202ENST00000396527 RIBC1Q8N443 379 aaPredicted RBP8.12□□□□□ -1.11
EIF4A1-202ENST00000396527 EMC1Q8N766 993 aa8.12□□□□□ -1.11
EIF4A1-202ENST00000396527 ANKRD52Q8NB46 1076 aa8.12□□□□□ -1.11
EIF4A1-202ENST00000396527 GLIS1Q8NBF1 620 aa8.12□□□□□ -1.11
EIF4A1-202ENST00000396527 UHMK1Q8TAS1 419 aaKnown RBP8.12□□□□□ -1.11
EIF4A1-202ENST00000396527 MDM1Q8TC05 714 aa8.12□□□□□ -1.11
EIF4A1-202ENST00000396527 ACTL9Q8TC94 416 aa8.12□□□□□ -1.11
EIF4A1-202ENST00000396527 EPS8L3Q8TE67 593 aaKnown RBP8.12□□□□□ -1.11
EIF4A1-202ENST00000396527 TEKT4Q8WW24 435 aa8.12□□□□□ -1.11
EIF4A1-202ENST00000396527 DNAJB3Q8WWF6 145 aa8.12□□□□□ -1.11
EIF4A1-202ENST00000396527 RBM15Q96T37 977 aaKnown RBP eCLIP8.12□□□□□ -1.111e-7■■■□□ 16.8
EIF4A1-202ENST00000396527 TBCBQ99426 244 aa8.12□□□□□ -1.11
EIF4A1-202ENST00000396527 FAM118BQ9BPY3 351 aa8.12□□□□□ -1.11
EIF4A1-202ENST00000396527 KATNAL1Q9BW62 490 aa8.12□□□□□ -1.11
EIF4A1-202ENST00000396527 MAK16Q9BXY0 300 aaKnown RBP8.12□□□□□ -1.11
EIF4A1-202ENST00000396527 CXCL16Q9H2A7 254 aa8.12□□□□□ -1.11
EIF4A1-202ENST00000396527 SPC25Q9HBM1 224 aa8.12□□□□□ -1.11
EIF4A1-202ENST00000396527 PPANQ9NQ55 473 aaKnown RBP8.12□□□□□ -1.11
EIF4A1-202ENST00000396527 HESX1Q9UBX0 185 aa8.12□□□□□ -1.11
EIF4A1-202ENST00000396527 SNX9Q9Y5X1 595 aa8.12□□□□□ -1.11
EIF4A1-202ENST00000396527 ACTL7BQ9Y614 415 aa8.12□□□□□ -1.11
EIF4A1-202ENST00000396527 FAM169AQ9Y6X4 670 aa8.12□□□□□ -1.11
EIF4A1-202ENST00000396527 MCM3APO60318 1980 aa8.11□□□□□ -1.11
EIF4A1-202ENST00000396527 ANK1P16157 1881 aa8.11□□□□□ -1.11
EIF4A1-202ENST00000396527 KPNA7A9QM74 516 aa8.11□□□□□ -1.11
EIF4A1-202ENST00000396527 E5RJQ4 531 aa8.11□□□□□ -1.11
EIF4A1-202ENST00000396527 APOC4-APOC2K7ER74 178 aa8.11□□□□□ -1.11
EIF4A1-202ENST00000396527 SGK1O00141 431 aa8.11□□□□□ -1.11
EIF4A1-202ENST00000396527 MYO1CO00159 1063 aa8.11□□□□□ -1.11
EIF4A1-202ENST00000396527 PPEF2O14830 753 aa8.11□□□□□ -1.11
EIF4A1-202ENST00000396527 PRPSAP2O60256 369 aa8.11□□□□□ -1.11
EIF4A1-202ENST00000396527 CDH16O75309 829 aa8.11□□□□□ -1.11
EIF4A1-202ENST00000396527 RECQL4O94761 1208 aa8.11□□□□□ -1.11
EIF4A1-202ENST00000396527 APOC2P02655 101 aa8.11□□□□□ -1.11
EIF4A1-202ENST00000396527 ETS1P14921 441 aa8.11□□□□□ -1.11
EIF4A1-202ENST00000396527 PECAM1P16284 738 aaPredicted RBP8.11□□□□□ -1.11
EIF4A1-202ENST00000396527 DRD4P21917 467 aa8.11□□□□□ -1.11
EIF4A1-202ENST00000396527 LRPAP1P30533 357 aa8.11□□□□□ -1.11
EIF4A1-202ENST00000396527 RDXP35241 583 aaKnown RBP8.11□□□□□ -1.11
EIF4A1-202ENST00000396527 RPL22P35268 128 aaKnown RBP8.11□□□□□ -1.11
EIF4A1-202ENST00000396527 GNL1P36915 607 aaPredicted RBP8.11□□□□□ -1.11
EIF4A1-202ENST00000396527 ACADSBP45954 432 aa8.11□□□□□ -1.11
EIF4A1-202ENST00000396527 VPS41P49754 854 aa8.11□□□□□ -1.11
EIF4A1-202ENST00000396527 TMEM62Q0P6H9 643 aa8.11□□□□□ -1.11
EIF4A1-202ENST00000396527 LONRF1Q17RB8 773 aa8.11□□□□□ -1.11
EIF4A1-202ENST00000396527 TRIM60Q495X7 471 aa8.11□□□□□ -1.11
EIF4A1-202ENST00000396527 PPP1R26Q5T8A7 1209 aaPredicted RBP8.11□□□□□ -1.11
EIF4A1-202ENST00000396527 TRNP1Q6NT89 227 aa8.11□□□□□ -1.11
EIF4A1-202ENST00000396527 PMF1Q6P1K2 205 aa8.11□□□□□ -1.11
EIF4A1-202ENST00000396527 OLFML1Q6UWY5 402 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms