RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 FMNL3Q8IVF7 1028 aa20.22■□□□□ 0.83
HOXA9-202ENST00000396345 MAB21L3Q8N8X9 362 aa20.22■□□□□ 0.83
HOXA9-202ENST00000396345 ZSCAN18Q8TBC5 510 aaPredicted RBP20.22■□□□□ 0.83
HOXA9-202ENST00000396345 DDX1Q92499 740 aaKnown RBP20.22■□□□□ 0.83
HOXA9-202ENST00000396345 HSFY1Q96LI6 401 aa20.22■□□□□ 0.83
HOXA9-202ENST00000396345 SLC46A2Q9BY10 475 aa20.22■□□□□ 0.83
HOXA9-202ENST00000396345 TRIM5Q9C035 493 aa20.22■□□□□ 0.83
HOXA9-202ENST00000396345 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.22■□□□□ 0.83
HOXA9-202ENST00000396345 ITIH6Q6UXX5 1313 aa20.22■□□□□ 0.83
HOXA9-202ENST00000396345 MYO16Q9Y6X6 1858 aa20.22■□□□□ 0.83
HOXA9-202ENST00000396345 ANAPC1Q9H1A4 1944 aa20.21■□□□□ 0.83
HOXA9-202ENST00000396345 A0A1W2PQJ5 194 aa20.21■□□□□ 0.83
HOXA9-202ENST00000396345 LRRC53A6NM62 1247 aa20.21■□□□□ 0.83
HOXA9-202ENST00000396345 AP5Z1O43299 807 aa20.21■□□□□ 0.83
HOXA9-202ENST00000396345 ZBED1O96006 694 aa20.21■□□□□ 0.83
HOXA9-202ENST00000396345 USP17L7P0C7H9 530 aa20.21■□□□□ 0.83
HOXA9-202ENST00000396345 LCP1P13796 627 aa20.21■□□□□ 0.83
HOXA9-202ENST00000396345 FERP16591 822 aa20.21■□□□□ 0.83
HOXA9-202ENST00000396345 ADIGQ0VDE8 80 aa20.21■□□□□ 0.83
HOXA9-202ENST00000396345 FAM78AQ5JUQ0 283 aa20.21■□□□□ 0.83
HOXA9-202ENST00000396345 MTSS1LQ765P7 747 aa20.21■□□□□ 0.83
HOXA9-202ENST00000396345 CCDC186Q7Z3E2 898 aa20.21■□□□□ 0.83
HOXA9-202ENST00000396345 SIX6OS1Q8N1H7 587 aa20.21■□□□□ 0.83
HOXA9-202ENST00000396345 STK32AQ8WU08 396 aa20.21■□□□□ 0.83
HOXA9-202ENST00000396345 SMARCD2Q92925 531 aa20.21■□□□□ 0.83
HOXA9-202ENST00000396345 ASB16Q96NS5 453 aa20.21■□□□□ 0.83
HOXA9-202ENST00000396345 ULBP1Q9BZM6 244 aa20.21■□□□□ 0.83
HOXA9-202ENST00000396345 CD320Q9NPF0 282 aa20.21■□□□□ 0.83
HOXA9-202ENST00000396345 TLR8Q9NR97 1041 aaKnown RBP20.21■□□□□ 0.83
HOXA9-202ENST00000396345 ST7Q9NRC1 585 aa20.21■□□□□ 0.83
HOXA9-202ENST00000396345 CYTH4Q9UIA0 394 aa20.21■□□□□ 0.83
HOXA9-202ENST00000396345 NOCTQ9UK39 431 aaKnown RBP20.21■□□□□ 0.83
HOXA9-202ENST00000396345 CEP83Q9Y592 693 aa20.21■□□□□ 0.83
HOXA9-202ENST00000396345 NCOR1O75376 2440 aa20.21■□□□□ 0.83
HOXA9-202ENST00000396345 TRAV19A0A0A6YYK7 116 aa20.2■□□□□ 0.82
HOXA9-202ENST00000396345 C2orf78A6NCI8 922 aa20.2■□□□□ 0.82
HOXA9-202ENST00000396345 ANHXE9PGG2 379 aa20.2■□□□□ 0.82
HOXA9-202ENST00000396345 PIK3R2O00459 728 aa20.2■□□□□ 0.82
HOXA9-202ENST00000396345 MMEP08473 750 aa20.2■□□□□ 0.82
HOXA9-202ENST00000396345 ZDHHC11BP0C7U3 371 aa20.2■□□□□ 0.82
HOXA9-202ENST00000396345 CDR2Q01850 454 aa20.2■□□□□ 0.82
HOXA9-202ENST00000396345 HTR4Q13639 388 aa20.2■□□□□ 0.82
HOXA9-202ENST00000396345 SFMBT2Q5VUG0 894 aa20.2■□□□□ 0.82
HOXA9-202ENST00000396345 SNX30Q5VWJ9 437 aa20.2■□□□□ 0.82
HOXA9-202ENST00000396345 SPECC1LQ69YQ0 1117 aa20.2■□□□□ 0.82
HOXA9-202ENST00000396345 PARM1Q6UWI2 310 aa20.2■□□□□ 0.82
HOXA9-202ENST00000396345 VSTM4Q8IW00 320 aa20.2■□□□□ 0.82
HOXA9-202ENST00000396345 CMTM8Q8IZV2 173 aa20.2■□□□□ 0.82
HOXA9-202ENST00000396345 WDTC1Q8N5D0 677 aa20.2■□□□□ 0.82
HOXA9-202ENST00000396345 ZNF397Q8NF99 534 aaPredicted RBP20.2■□□□□ 0.82
HOXA9-202ENST00000396345 ST13P5Q8NFI4 369 aaPredicted RBP20.2■□□□□ 0.82
HOXA9-202ENST00000396345 SLC20A1Q8WUM9 679 aa20.2■□□□□ 0.82
HOXA9-202ENST00000396345 CPLX3Q8WVH0 158 aa20.2■□□□□ 0.82
HOXA9-202ENST00000396345 CAPN11Q9UMQ6 739 aa20.2■□□□□ 0.82
HOXA9-202ENST00000396345 BDP1A6H8Y1 2624 aa20.19■□□□□ 0.82
HOXA9-202ENST00000396345 A0A1W2PQH9 124 aa20.19■□□□□ 0.82
HOXA9-202ENST00000396345 TNFRSF10AO00220 468 aa20.19■□□□□ 0.82
HOXA9-202ENST00000396345 GABBR2O75899 941 aa20.19■□□□□ 0.82
HOXA9-202ENST00000396345 CHRNB2P17787 502 aa20.19■□□□□ 0.82
HOXA9-202ENST00000396345 WEE1P30291 646 aa20.19■□□□□ 0.82
HOXA9-202ENST00000396345 AVPR1AP37288 418 aa20.19■□□□□ 0.82
HOXA9-202ENST00000396345 ACADSBP45954 432 aa20.19■□□□□ 0.82
HOXA9-202ENST00000396345 RPL34P49207 117 aaKnown RBP20.19■□□□□ 0.82
HOXA9-202ENST00000396345 PGFP49763 221 aa20.19■□□□□ 0.82
HOXA9-202ENST00000396345 PDCLQ13371 301 aa20.19■□□□□ 0.82
HOXA9-202ENST00000396345 ASIC2Q16515 512 aa20.19■□□□□ 0.82
HOXA9-202ENST00000396345 PM20D1Q6GTS8 502 aa20.19■□□□□ 0.82
HOXA9-202ENST00000396345 IRF2BP2Q7Z5L9 587 aa20.19■□□□□ 0.82
HOXA9-202ENST00000396345 RNF135Q8IUD6 432 aa20.19■□□□□ 0.82
HOXA9-202ENST00000396345 ARID3BQ8IVW6 561 aaPredicted RBP20.19■□□□□ 0.82
HOXA9-202ENST00000396345 TMEM35BQ8NCS4 154 aa20.19■□□□□ 0.82
HOXA9-202ENST00000396345 C1orf131Q8NDD1 294 aaKnown RBP20.19■□□□□ 0.82
HOXA9-202ENST00000396345 FGF14Q92915 247 aa20.19■□□□□ 0.82
HOXA9-202ENST00000396345 NXPE3Q969Y0 559 aa20.19■□□□□ 0.82
HOXA9-202ENST00000396345 NOX5Q96PH1 765 aa20.19■□□□□ 0.82
HOXA9-202ENST00000396345 CYP2S1Q96SQ9 504 aa20.19■□□□□ 0.82
HOXA9-202ENST00000396345 SLC4A5Q9BY07 1137 aa20.19■□□□□ 0.82
HOXA9-202ENST00000396345 KCNK12Q9HB15 430 aa20.19■□□□□ 0.82
HOXA9-202ENST00000396345 TRPV4Q9HBA0 871 aa20.19■□□□□ 0.82
HOXA9-202ENST00000396345 ZFP14Q9HCL3 533 aa20.19■□□□□ 0.82
HOXA9-202ENST00000396345 CYLDQ9NQC7 956 aa20.19■□□□□ 0.82
HOXA9-202ENST00000396345 CNGB3Q9NQW8 809 aa20.19■□□□□ 0.82
HOXA9-202ENST00000396345 AIPL1Q9NZN9 384 aa20.19■□□□□ 0.82
HOXA9-202ENST00000396345 IGSF9Q9P2J2 1179 aa20.19■□□□□ 0.82
HOXA9-202ENST00000396345 NUMBLQ9Y6R0 609 aa20.19■□□□□ 0.82
HOXA9-202ENST00000396345 MYO10Q9HD67 2058 aa20.18■□□□□ 0.82
HOXA9-202ENST00000396345 TTC28Q96AY4 2481 aa20.18■□□□□ 0.82
HOXA9-202ENST00000396345 MUC3AQ02505 3323 aa20.18■□□□□ 0.82
HOXA9-202ENST00000396345 FBXO21O94952 628 aa20.18■□□□□ 0.82
HOXA9-202ENST00000396345 GYPCP04921 128 aa20.18■□□□□ 0.82
HOXA9-202ENST00000396345 ASGR2P07307 311 aa20.18■□□□□ 0.82
HOXA9-202ENST00000396345 PFKLP17858 780 aa20.18■□□□□ 0.82
HOXA9-202ENST00000396345 HDCP19113 662 aa20.18■□□□□ 0.82
HOXA9-202ENST00000396345 FCARP24071 287 aa20.18■□□□□ 0.82
HOXA9-202ENST00000396345 PSEN1P49768 467 aa20.18■□□□□ 0.82
HOXA9-202ENST00000396345 HECTD3Q5T447 861 aa20.18■□□□□ 0.82
HOXA9-202ENST00000396345 TANGO2Q6ICL3 276 aa20.18■□□□□ 0.82
HOXA9-202ENST00000396345 SCD5Q86SK9 330 aa20.18■□□□□ 0.82
HOXA9-202ENST00000396345 SCML4Q8N228 414 aa20.18■□□□□ 0.82
HOXA9-202ENST00000396345 ARHGAP18Q8N392 663 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms