RNA–Protein interactions for RNA: ENST00000396033.6

ITGB1-202, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene ITGB1, Length 3,784 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-202ENST00000396033 CASP8AP2Q9UKL3 1982 aa12.7□□□□□ -0.38
ITGB1-202ENST00000396033 GHRP10912 638 aa12.7□□□□□ -0.38
ITGB1-202ENST00000396033 CD52P31358 61 aa12.7□□□□□ -0.38
ITGB1-202ENST00000396033 SP3Q02447 781 aa12.7□□□□□ -0.38
ITGB1-202ENST00000396033 MMRN1Q13201 1228 aa12.7□□□□□ -0.38
ITGB1-202ENST00000396033 RPAINQ86UA6 219 aa12.7□□□□□ -0.38
ITGB1-202ENST00000396033 GSTCDQ8NEC7 633 aa12.7□□□□□ -0.38
ITGB1-202ENST00000396033 KLHDC9Q8NEP7 349 aa12.7□□□□□ -0.38
ITGB1-202ENST00000396033 KHSRPQ92945 711 aaKnown RBP eCLIP12.7□□□□□ -0.382e-6■■■□□ 15.6
ITGB1-202ENST00000396033 PCDH9Q9HC56 1237 aa12.7□□□□□ -0.38
ITGB1-202ENST00000396033 RNF186Q9NXI6 227 aa12.7□□□□□ -0.38
ITGB1-202ENST00000396033 A6NNZ2 444 aa12.69□□□□□ -0.38
ITGB1-202ENST00000396033 DCDC2CA8MYV0 355 aa12.69□□□□□ -0.38
ITGB1-202ENST00000396033 APOC4-APOC2K7ER74 178 aa12.69□□□□□ -0.38
ITGB1-202ENST00000396033 ATP2C2O75185 946 aa12.69□□□□□ -0.38
ITGB1-202ENST00000396033 APOC2P02655 101 aa12.69□□□□□ -0.38
ITGB1-202ENST00000396033 ACADSBP45954 432 aa12.69□□□□□ -0.38
ITGB1-202ENST00000396033 AFF1P51825 1210 aaKnown RBP12.69□□□□□ -0.38
ITGB1-202ENST00000396033 CCDC142Q17RM4 750 aa12.69□□□□□ -0.38
ITGB1-202ENST00000396033 TUBB8Q3ZCM7 444 aa12.69□□□□□ -0.38
ITGB1-202ENST00000396033 EMC10Q5UCC4 262 aa12.69□□□□□ -0.38
ITGB1-202ENST00000396033 RNF169Q8NCN4 708 aa12.69□□□□□ -0.38
ITGB1-202ENST00000396033 EPS8L3Q8TE67 593 aaKnown RBP12.69□□□□□ -0.38
ITGB1-202ENST00000396033 GPATCH2LQ9NWQ4 482 aa12.69□□□□□ -0.38
ITGB1-202ENST00000396033 NOD1Q9Y239 953 aa12.69□□□□□ -0.38
ITGB1-202ENST00000396033 GRIN2DO15399 1336 aa12.69□□□□□ -0.38
ITGB1-202ENST00000396033 EIF3HO15372 352 aaKnown RBP eCLIP12.69□□□□□ -0.38
ITGB1-202ENST00000396033 PECAM1P16284 738 aaPredicted RBP12.69□□□□□ -0.38
ITGB1-202ENST00000396033 IGFBP6P24592 240 aaPredicted RBP12.69□□□□□ -0.38
ITGB1-202ENST00000396033 SCNN1GP51170 649 aa12.69□□□□□ -0.38
ITGB1-202ENST00000396033 GUCY1A3Q02108 690 aa12.69□□□□□ -0.38
ITGB1-202ENST00000396033 DPYSL3Q14195 570 aa12.69□□□□□ -0.38
ITGB1-202ENST00000396033 SLC26A9Q7LBE3 791 aa12.69□□□□□ -0.38
ITGB1-202ENST00000396033 CROCCP2Q86T23 111 aa12.69□□□□□ -0.38
ITGB1-202ENST00000396033 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.69□□□□□ -0.38
ITGB1-202ENST00000396033 OSBPL7Q9BZF2 842 aa12.69□□□□□ -0.38
ITGB1-202ENST00000396033 C10orf88Q9H8K7 445 aa12.69□□□□□ -0.38
ITGB1-202ENST00000396033 CYLDQ9NQC7 956 aa12.69□□□□□ -0.38
ITGB1-202ENST00000396033 PADI3Q9ULW8 664 aa12.69□□□□□ -0.38
ITGB1-202ENST00000396033 GIT1Q9Y2X7 761 aa12.69□□□□□ -0.38
ITGB1-202ENST00000396033 ARL5CA6NH57 179 aa12.69□□□□□ -0.38
ITGB1-202ENST00000396033 MCF2LO15068 1137 aa12.69□□□□□ -0.38
ITGB1-202ENST00000396033 RGS16O15492 202 aaPredicted RBP12.69□□□□□ -0.38
ITGB1-202ENST00000396033 SLCO1A2P46721 670 aa12.69□□□□□ -0.38
ITGB1-202ENST00000396033 SLC8A3P57103 927 aa12.69□□□□□ -0.38
ITGB1-202ENST00000396033 MAP7D3Q8IWC1 876 aa12.69□□□□□ -0.38
ITGB1-202ENST00000396033 RSAD2Q8WXG1 361 aa12.69□□□□□ -0.38
ITGB1-202ENST00000396033 SENP8Q96LD8 212 aa12.69□□□□□ -0.38
ITGB1-202ENST00000396033 HSFY1Q96LI6 401 aa12.69□□□□□ -0.38
ITGB1-202ENST00000396033 ADAM7Q9H2U9 754 aa12.69□□□□□ -0.38
ITGB1-202ENST00000396033 MIOSQ9NXC5 875 aa12.69□□□□□ -0.38
ITGB1-202ENST00000396033 TPX2Q9ULW0 747 aaKnown RBP12.69□□□□□ -0.38
ITGB1-202ENST00000396033 PTPN1P18031 435 aaKnown RBP12.68□□□□□ -0.38
ITGB1-202ENST00000396033 CLCNKBP51801 687 aa12.68□□□□□ -0.38
ITGB1-202ENST00000396033 EIF3EP60228 445 aaKnown RBP12.68□□□□□ -0.38
ITGB1-202ENST00000396033 PPP2R2AP63151 447 aa12.68□□□□□ -0.38
ITGB1-202ENST00000396033 PPARDQ03181 441 aa12.68□□□□□ -0.38
ITGB1-202ENST00000396033 BOLA3Q53S33 107 aa12.68□□□□□ -0.38
ITGB1-202ENST00000396033 AGMOQ6ZNB7 445 aa12.68□□□□□ -0.38
ITGB1-202ENST00000396033 SUGP1Q8IWZ8 645 aaKnown RBP12.68□□□□□ -0.38
ITGB1-202ENST00000396033 ZCCHC9Q8N567 271 aaKnown RBP12.68□□□□□ -0.38
ITGB1-202ENST00000396033 PCSK9Q8NBP7 692 aaKnown RBP12.68□□□□□ -0.38
ITGB1-202ENST00000396033 TLCD1Q96CP7 247 aa12.68□□□□□ -0.38
ITGB1-202ENST00000396033 MED10Q9BTT4 135 aa12.68□□□□□ -0.38
ITGB1-202ENST00000396033 CLDN5O00501 218 aa12.68□□□□□ -0.38
ITGB1-202ENST00000396033 RASGRF2O14827 1237 aa12.68□□□□□ -0.38
ITGB1-202ENST00000396033 XPO1O14980 1071 aaKnown RBP12.68□□□□□ -0.38
ITGB1-202ENST00000396033 TTC4O95801 387 aa12.68□□□□□ -0.38
ITGB1-202ENST00000396033 CST5P28325 142 aaPredicted RBP12.68□□□□□ -0.38
ITGB1-202ENST00000396033 RPL34P49207 117 aaKnown RBP12.68□□□□□ -0.38
ITGB1-202ENST00000396033 CDR1P51861 262 aa12.68□□□□□ -0.38
ITGB1-202ENST00000396033 GDF10P55107 478 aa12.68□□□□□ -0.38
ITGB1-202ENST00000396033 KYNUQ16719 465 aa12.68□□□□□ -0.38
ITGB1-202ENST00000396033 ZC3H12AQ5D1E8 599 aaKnown RBP12.68□□□□□ -0.38
ITGB1-202ENST00000396033 MDH1BQ5I0G3 518 aa12.68□□□□□ -0.38
ITGB1-202ENST00000396033 C6orf118Q5T5N4 469 aa12.68□□□□□ -0.38
ITGB1-202ENST00000396033 FBXW10Q5XX13 1052 aa12.68□□□□□ -0.38
ITGB1-202ENST00000396033 CCSAPQ6IQ19 270 aaPredicted RBP12.68□□□□□ -0.38
ITGB1-202ENST00000396033 CEP128Q6ZU80 1094 aa12.68□□□□□ -0.38
ITGB1-202ENST00000396033 FUKQ8N0W3 1084 aa12.68□□□□□ -0.38
ITGB1-202ENST00000396033 TEKT4Q8WW24 435 aa12.68□□□□□ -0.38
ITGB1-202ENST00000396033 PGM2Q96G03 612 aa12.68□□□□□ -0.38
ITGB1-202ENST00000396033 TBCBQ99426 244 aa12.68□□□□□ -0.38
ITGB1-202ENST00000396033 HNRNPABQ99729 332 aaKnown RBP12.68□□□□□ -0.38
ITGB1-202ENST00000396033 SNRNP25Q9BV90 132 aaKnown RBP12.68□□□□□ -0.38
ITGB1-202ENST00000396033 TMEM109Q9BVC6 243 aa12.68□□□□□ -0.38
ITGB1-202ENST00000396033 DDX43Q9NXZ2 648 aaKnown RBP12.68□□□□□ -0.38
ITGB1-202ENST00000396033 NINJ2Q9NZG7 142 aa12.68□□□□□ -0.38
ITGB1-202ENST00000396033 CASTOR2A6NHX0 329 aa12.68□□□□□ -0.38
ITGB1-202ENST00000396033 ENDOD1O94919 500 aa12.68□□□□□ -0.38
ITGB1-202ENST00000396033 SCNN1AP37088 669 aa12.68□□□□□ -0.38
ITGB1-202ENST00000396033 HDAC4P56524 1084 aa12.68□□□□□ -0.38
ITGB1-202ENST00000396033 TFDP2Q14188 446 aa12.68□□□□□ -0.38
ITGB1-202ENST00000396033 PDK2Q15119 407 aa12.68□□□□□ -0.38
ITGB1-202ENST00000396033 DSTYKQ6XUX3 929 aa12.68□□□□□ -0.38
ITGB1-202ENST00000396033 PIGZQ86VD9 579 aa12.68□□□□□ -0.38
ITGB1-202ENST00000396033 SPATA18Q8TC71 538 aa12.68□□□□□ -0.38
ITGB1-202ENST00000396033 RBM15Q96T37 977 aaKnown RBP eCLIP12.68□□□□□ -0.381e-6■■□□□ 12.5
ITGB1-202ENST00000396033 DUSP16Q9BY84 665 aa12.68□□□□□ -0.38
ITGB1-202ENST00000396033 FOXP3Q9BZS1 431 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms