RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 CELF2O95319 508 aaKnown RBP5.62□□□□□ -1.51
VPS41-203ENST00000395969 AGTP01019 485 aa5.62□□□□□ -1.51
VPS41-203ENST00000395969 SHBGP04278 402 aa5.62□□□□□ -1.51
VPS41-203ENST00000395969 PGK2P07205 417 aa5.62□□□□□ -1.51
VPS41-203ENST00000395969 TPBGLP0DKB5 382 aa5.62□□□□□ -1.51
VPS41-203ENST00000395969 CYP2C8P10632 490 aa5.62□□□□□ -1.51
VPS41-203ENST00000395969 SSTR3P32745 418 aaPredicted RBP5.62□□□□□ -1.51
VPS41-203ENST00000395969 HTR7P34969 479 aa5.62□□□□□ -1.51
VPS41-203ENST00000395969 MAGEA10P43363 369 aaPredicted RBP5.62□□□□□ -1.51
VPS41-203ENST00000395969 DHX9Q08211 1270 aaKnown RBP5.62□□□□□ -1.51
VPS41-203ENST00000395969 PTK7Q13308 1070 aa5.62□□□□□ -1.51
VPS41-203ENST00000395969 PTK6Q13882 451 aa5.62□□□□□ -1.51
VPS41-203ENST00000395969 FOXB2Q5VYV0 432 aa5.62□□□□□ -1.51
VPS41-203ENST00000395969 GJB7Q6PEY0 223 aa5.62□□□□□ -1.51
VPS41-203ENST00000395969 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.62□□□□□ -1.512e-7■■■■■ 278.5
VPS41-203ENST00000395969 CMASQ8NFW8 434 aaPredicted RBP5.62□□□□□ -1.51
VPS41-203ENST00000395969 OR6J1Q8NGC5 347 aa5.62□□□□□ -1.51
VPS41-203ENST00000395969 OR5B17Q8NGF7 314 aa5.62□□□□□ -1.51
VPS41-203ENST00000395969 SLC20A1Q8WUM9 679 aa5.62□□□□□ -1.51
VPS41-203ENST00000395969 AZIN2Q96A70 460 aa5.62□□□□□ -1.51
VPS41-203ENST00000395969 DNAI2Q9GZS0 605 aa5.62□□□□□ -1.51
VPS41-203ENST00000395969 MINDY3Q9H8M7 445 aa5.62□□□□□ -1.51
VPS41-203ENST00000395969 CAPN10Q9HC96 672 aa5.62□□□□□ -1.51
VPS41-203ENST00000395969 INTS9Q9NV88 658 aaKnown RBP5.62□□□□□ -1.51
VPS41-203ENST00000395969 BARX2Q9UMQ3 279 aaPredicted RBP5.62□□□□□ -1.51
VPS41-203ENST00000395969 PHF24Q9UPV7 400 aa5.62□□□□□ -1.51
VPS41-203ENST00000395969 PCDHGA4Q9Y5G9 962 aa5.62□□□□□ -1.51
VPS41-203ENST00000395969 ALG6Q9Y672 507 aa5.62□□□□□ -1.51
VPS41-203ENST00000395969 MOXD2PA6NHM9 499 aa5.61□□□□□ -1.51
VPS41-203ENST00000395969 TNNC2P02585 160 aa5.61□□□□□ -1.51
VPS41-203ENST00000395969 ABHD2P08910 425 aa5.61□□□□□ -1.51
VPS41-203ENST00000395969 STAG3L1P0CL83 205 aa5.61□□□□□ -1.51
VPS41-203ENST00000395969 TPP2P29144 1249 aaPredicted RBP5.61□□□□□ -1.51
VPS41-203ENST00000395969 PIK3CAP42336 1068 aa5.61□□□□□ -1.51
VPS41-203ENST00000395969 PTPN9P43378 593 aa5.61□□□□□ -1.51
VPS41-203ENST00000395969 FCGRTP55899 365 aa5.61□□□□□ -1.51
VPS41-203ENST00000395969 SNX16P57768 344 aa5.61□□□□□ -1.51
VPS41-203ENST00000395969 KLC1Q07866 573 aa5.61□□□□□ -1.51
VPS41-203ENST00000395969 CCNG2Q16589 344 aa5.61□□□□□ -1.51
VPS41-203ENST00000395969 PLEKHG6Q3KR16 790 aa5.61□□□□□ -1.51
VPS41-203ENST00000395969 ACBD5Q5T8D3 534 aaPredicted RBP5.61□□□□□ -1.51
VPS41-203ENST00000395969 IRGCQ6NXR0 463 aa5.61□□□□□ -1.51
VPS41-203ENST00000395969 RCOR2Q8IZ40 523 aa5.61□□□□□ -1.51
VPS41-203ENST00000395969 KIF2BQ8N4N8 673 aa5.61□□□□□ -1.51
VPS41-203ENST00000395969 FITM2Q8N6M3 262 aa5.61□□□□□ -1.51
VPS41-203ENST00000395969 ANKLE1Q8NAG6 615 aa5.61□□□□□ -1.51
VPS41-203ENST00000395969 RNF149Q8NC42 400 aa5.61□□□□□ -1.51
VPS41-203ENST00000395969 TRPV1Q8NER1 839 aa5.61□□□□□ -1.51
VPS41-203ENST00000395969 ZNF606Q8WXB4 792 aa5.61□□□□□ -1.51
VPS41-203ENST00000395969 ART4Q93070 314 aa5.61□□□□□ -1.51
VPS41-203ENST00000395969 FNBP1Q96RU3 617 aa5.61□□□□□ -1.51
VPS41-203ENST00000395969 TBCBQ99426 244 aa5.61□□□□□ -1.51
VPS41-203ENST00000395969 PLVAPQ9BX97 442 aa5.61□□□□□ -1.51
VPS41-203ENST00000395969 TRIM4Q9C037 500 aa5.61□□□□□ -1.51
VPS41-203ENST00000395969 RPF1Q9H9Y2 349 aaKnown RBP5.61□□□□□ -1.51
VPS41-203ENST00000395969 ERVK-5Q9HDB9 667 aa5.61□□□□□ -1.51
VPS41-203ENST00000395969 GIT1Q9Y2X7 761 aa5.61□□□□□ -1.51
VPS41-203ENST00000395969 TRIP11Q15643 1979 aa5.61□□□□□ -1.51
VPS41-203ENST00000395969 CHD5Q8TDI0 1954 aa5.61□□□□□ -1.51
VPS41-203ENST00000395969 TTLL13PA6NNM8 815 aa5.61□□□□□ -1.51
VPS41-203ENST00000395969 KBTBD13C9JR72 458 aa5.61□□□□□ -1.51
VPS41-203ENST00000395969 XPOTO43592 962 aaKnown RBP5.61□□□□□ -1.51
VPS41-203ENST00000395969 SUN1O94901 812 aa5.61□□□□□ -1.51
VPS41-203ENST00000395969 UNC5CO95185 931 aa5.61□□□□□ -1.51
VPS41-203ENST00000395969 PENKP01210 267 aaPredicted RBP5.61□□□□□ -1.51
VPS41-203ENST00000395969 PFKMP08237 780 aa5.61□□□□□ -1.51
VPS41-203ENST00000395969 GSTA2P09210 222 aa5.61□□□□□ -1.51
VPS41-203ENST00000395969 RNASE9P60153 205 aaKnown RBP5.61□□□□□ -1.51
VPS41-203ENST00000395969 NRG1Q02297 640 aaPredicted RBP5.61□□□□□ -1.51
VPS41-203ENST00000395969 ZNF33AQ06730 810 aa5.61□□□□□ -1.51
VPS41-203ENST00000395969 LRRC23Q53EV4 343 aaPredicted RBP5.61□□□□□ -1.51
VPS41-203ENST00000395969 RAB41Q5JT25 222 aa5.61□□□□□ -1.51
VPS41-203ENST00000395969 LIN9Q5TKA1 542 aa5.61□□□□□ -1.51
VPS41-203ENST00000395969 MFSD5Q6N075 450 aa5.61□□□□□ -1.51
VPS41-203ENST00000395969 TMEM154Q6P9G4 183 aa5.61□□□□□ -1.51
VPS41-203ENST00000395969 CYS1Q717R9 158 aa5.61□□□□□ -1.51
VPS41-203ENST00000395969 TLK2Q86UE8 772 aa5.61□□□□□ -1.51
VPS41-203ENST00000395969 PALB2Q86YC2 1186 aa5.61□□□□□ -1.51
VPS41-203ENST00000395969 WDR75Q8IWA0 830 aaKnown RBP5.61□□□□□ -1.51
VPS41-203ENST00000395969 TMEM86AQ8N2M4 240 aa5.61□□□□□ -1.51
VPS41-203ENST00000395969 RBBP8NLQ8NC74 664 aaPredicted RBP5.61□□□□□ -1.51
VPS41-203ENST00000395969 PHC3Q8NDX5 983 aa5.61□□□□□ -1.51
VPS41-203ENST00000395969 FEZF2Q8TBJ5 459 aa5.61□□□□□ -1.51
VPS41-203ENST00000395969 NCSTNQ92542 709 aa5.61□□□□□ -1.51
VPS41-203ENST00000395969 RAB3IPQ96QF0 476 aaPredicted RBP5.61□□□□□ -1.51
VPS41-203ENST00000395969 KIFC3Q9BVG8 833 aa5.61□□□□□ -1.51
VPS41-203ENST00000395969 YIPF2Q9BWQ6 316 aa5.61□□□□□ -1.51
VPS41-203ENST00000395969 UBE2OQ9C0C9 1292 aaKnown RBP5.61□□□□□ -1.51
VPS41-203ENST00000395969 PABPC3Q9H361 631 aaKnown RBP5.61□□□□□ -1.51
VPS41-203ENST00000395969 ZWILCHQ9H900 591 aa5.61□□□□□ -1.51
VPS41-203ENST00000395969 CSNK1G1Q9HCP0 422 aa5.61□□□□□ -1.51
VPS41-203ENST00000395969 TAS2R14Q9NYV8 317 aa5.61□□□□□ -1.51
VPS41-203ENST00000395969 FNIP2Q9P278 1114 aa5.61□□□□□ -1.51
VPS41-203ENST00000395969 HSFX1Q9UBD0 423 aa5.61□□□□□ -1.51
VPS41-203ENST00000395969 MAFFQ9ULX9 164 aa5.61□□□□□ -1.51
VPS41-203ENST00000395969 UBQLN1Q9UMX0 589 aaKnown RBP5.61□□□□□ -1.51
VPS41-203ENST00000395969 STK38LQ9Y2H1 464 aa5.61□□□□□ -1.51
VPS41-203ENST00000395969 NOC2LQ9Y3T9 749 aaKnown RBP5.61□□□□□ -1.51
VPS41-203ENST00000395969 PLXNA4Q9HCM2 1894 aa5.61□□□□□ -1.51
VPS41-203ENST00000395969 CXorf51AA0A1B0GTR3 108 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms