RNA–Protein interactions for RNA: ENST00000395906.7

CDRT1-204, CMT1A duplicated region transcript 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDRT1, Length 2,571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-204ENST00000395906 EARS2Q5JPH6 523 aaKnown RBP10.07□□□□□ -0.8
CDRT1-204ENST00000395906 PPM1KQ8N3J5 372 aa10.07□□□□□ -0.8
CDRT1-204ENST00000395906 C12orf50Q8NA57 414 aaPredicted RBP10.07□□□□□ -0.8
CDRT1-204ENST00000395906 GSTCDQ8NEC7 633 aa10.07□□□□□ -0.8
CDRT1-204ENST00000395906 OXNAD1Q96HP4 312 aaPredicted RBP10.07□□□□□ -0.8
CDRT1-204ENST00000395906 CIB1Q99828 191 aa10.07□□□□□ -0.8
CDRT1-204ENST00000395906 RIOK1Q9BRS2 568 aaKnown RBP10.07□□□□□ -0.8
CDRT1-204ENST00000395906 C17orf80Q9BSJ5 609 aa10.07□□□□□ -0.8
CDRT1-204ENST00000395906 DCUN1D5Q9BTE7 237 aa10.07□□□□□ -0.8
CDRT1-204ENST00000395906 TMEM120AQ9BXJ8 343 aa10.07□□□□□ -0.8
CDRT1-204ENST00000395906 MROQ9BYG7 248 aa10.07□□□□□ -0.8
CDRT1-204ENST00000395906 C1orf21Q9H246 121 aa10.07□□□□□ -0.8
CDRT1-204ENST00000395906 KCNN3Q9UGI6 736 aa10.07□□□□□ -0.8
CDRT1-204ENST00000395906 HMGXB4Q9UGU5 601 aa10.07□□□□□ -0.8
CDRT1-204ENST00000395906 APOBEC2Q9Y235 224 aaKnown RBP10.07□□□□□ -0.8
CDRT1-204ENST00000395906 SCO2O43819 266 aa10.07□□□□□ -0.8
CDRT1-204ENST00000395906 PCP11498 1178 aaKnown RBP10.07□□□□□ -0.8
CDRT1-204ENST00000395906 POLR2CP19387 275 aaPredicted RBP10.07□□□□□ -0.8
CDRT1-204ENST00000395906 BTDP43251 543 aa10.07□□□□□ -0.8
CDRT1-204ENST00000395906 BMXP51813 675 aa10.07□□□□□ -0.8
CDRT1-204ENST00000395906 GNG2P59768 71 aa10.07□□□□□ -0.8
CDRT1-204ENST00000395906 EVX2Q03828 476 aa10.07□□□□□ -0.8
CDRT1-204ENST00000395906 HIC1Q14526 733 aa10.07□□□□□ -0.8
CDRT1-204ENST00000395906 EEPD1Q7L9B9 569 aa10.07□□□□□ -0.8
CDRT1-204ENST00000395906 FBXO33Q7Z6M2 555 aa10.07□□□□□ -0.8
CDRT1-204ENST00000395906 GALNT13Q8IUC8 556 aa10.07□□□□□ -0.8
CDRT1-204ENST00000395906 KIAA2013Q8IYS2 634 aa10.07□□□□□ -0.8
CDRT1-204ENST00000395906 CATSPER1Q8NEC5 780 aa10.07□□□□□ -0.8
CDRT1-204ENST00000395906 FBXO27Q8NI29 283 aa10.07□□□□□ -0.8
CDRT1-204ENST00000395906 SDR42E1Q8WUS8 393 aa10.07□□□□□ -0.8
CDRT1-204ENST00000395906 C12orf43Q96C57 262 aaKnown RBP10.07□□□□□ -0.8
CDRT1-204ENST00000395906 VMP1Q96GC9 406 aa10.07□□□□□ -0.8
CDRT1-204ENST00000395906 ZNF486Q96H40 463 aaPredicted RBP10.07□□□□□ -0.8
CDRT1-204ENST00000395906 LSM14BQ9BX40 385 aaKnown RBP10.07□□□□□ -0.8
CDRT1-204ENST00000395906 TP63Q9H3D4 680 aaPredicted RBP10.07□□□□□ -0.8
CDRT1-204ENST00000395906 NDFIP2Q9NV92 336 aa10.07□□□□□ -0.8
CDRT1-204ENST00000395906 SENP1Q9P0U3 644 aa10.07□□□□□ -0.8
CDRT1-204ENST00000395906 EBF1Q9UH73 591 aa10.07□□□□□ -0.8
CDRT1-204ENST00000395906 TAGLN3Q9UI15 199 aa10.07□□□□□ -0.8
CDRT1-204ENST00000395906 ATPIF1Q9UII2 106 aa10.07□□□□□ -0.8
CDRT1-204ENST00000395906 DAPK2Q9UIK4 370 aa10.07□□□□□ -0.8
CDRT1-204ENST00000395906 NAGPAQ9UK23 515 aa10.07□□□□□ -0.8
CDRT1-204ENST00000395906 WDR91A4D1P6 747 aa10.06□□□□□ -0.8
CDRT1-204ENST00000395906 CAPN14A8MX76 684 aa10.06□□□□□ -0.8
CDRT1-204ENST00000395906 ANKRD63C9JTQ0 380 aa10.06□□□□□ -0.8
CDRT1-204ENST00000395906 E9PMD0 336 aa10.06□□□□□ -0.8
CDRT1-204ENST00000395906 GABBR2O75899 941 aa10.06□□□□□ -0.8
CDRT1-204ENST00000395906 ENO1P06733 434 aaKnown RBP10.06□□□□□ -0.8
CDRT1-204ENST00000395906 RAG1P15918 1043 aa10.06□□□□□ -0.8
CDRT1-204ENST00000395906 CTNNA2P26232 953 aa10.06□□□□□ -0.8
CDRT1-204ENST00000395906 RPA3P35244 121 aaPredicted RBP10.06□□□□□ -0.8
CDRT1-204ENST00000395906 PIK3CAP42336 1068 aa10.06□□□□□ -0.8
CDRT1-204ENST00000395906 DYNLL1P63167 89 aaKnown RBP10.06□□□□□ -0.8
CDRT1-204ENST00000395906 OVGP1Q12889 678 aa10.06□□□□□ -0.8
CDRT1-204ENST00000395906 CCNIQ14094 377 aa10.06□□□□□ -0.8
CDRT1-204ENST00000395906 STILQ15468 1287 aa10.06□□□□□ -0.8
CDRT1-204ENST00000395906 SLC1A5Q15758 541 aa10.06□□□□□ -0.8
CDRT1-204ENST00000395906 IL17AQ16552 155 aa10.06□□□□□ -0.8
CDRT1-204ENST00000395906 RTN1Q16799 776 aa10.06□□□□□ -0.8
CDRT1-204ENST00000395906 CENPPQ6IPU0 288 aa10.06□□□□□ -0.8
CDRT1-204ENST00000395906 ALKBH5Q6P6C2 394 aaKnown RBP10.06□□□□□ -0.8
CDRT1-204ENST00000395906 CCDC137Q6PK04 289 aaKnown RBP10.06□□□□□ -0.8
CDRT1-204ENST00000395906 TAS2R42Q7RTR8 314 aa10.06□□□□□ -0.8
CDRT1-204ENST00000395906 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.06□□□□□ -0.8
CDRT1-204ENST00000395906 PRELID2Q8N945 189 aa10.06□□□□□ -0.8
CDRT1-204ENST00000395906 CCDC89Q8N998 374 aa10.06□□□□□ -0.8
CDRT1-204ENST00000395906 ATP2A3Q93084 1043 aa10.06□□□□□ -0.8
CDRT1-204ENST00000395906 VPS35Q96QK1 796 aa10.06□□□□□ -0.8
CDRT1-204ENST00000395906 MKNK1Q9BUB5 465 aa10.06□□□□□ -0.8
CDRT1-204ENST00000395906 HOXD1Q9GZZ0 328 aa10.06□□□□□ -0.8
CDRT1-204ENST00000395906 SEMA6BQ9H3T3 888 aa10.06□□□□□ -0.8
CDRT1-204ENST00000395906 TRABDQ9H4I3 376 aa10.06□□□□□ -0.8
CDRT1-204ENST00000395906 RUBCNLQ9H714 662 aa10.06□□□□□ -0.8
CDRT1-204ENST00000395906 KBTBD4Q9NVX7 518 aa10.06□□□□□ -0.8
CDRT1-204ENST00000395906 WHRNQ9P202 907 aa10.06□□□□□ -0.8
CDRT1-204ENST00000395906 GGA1Q9UJY5 639 aa10.06□□□□□ -0.8
CDRT1-204ENST00000395906 SLC4A4Q9Y6R1 1079 aa10.06□□□□□ -0.8
CDRT1-204ENST00000395906 TCRBV5S4A2TA0A5A2 114 aa10.06□□□□□ -0.8
CDRT1-204ENST00000395906 A8MU76 341 aa10.06□□□□□ -0.8
CDRT1-204ENST00000395906 B8ZZF3 427 aa10.06□□□□□ -0.8
CDRT1-204ENST00000395906 H0YIN7 160 aa10.06□□□□□ -0.8
CDRT1-204ENST00000395906 ENPP3O14638 875 aa10.06□□□□□ -0.8
CDRT1-204ENST00000395906 CYP26A1O43174 497 aa10.06□□□□□ -0.8
CDRT1-204ENST00000395906 SGTAO43765 313 aa10.06□□□□□ -0.8
CDRT1-204ENST00000395906 TGDSO95455 350 aa10.06□□□□□ -0.8
CDRT1-204ENST00000395906 H2AFZP0C0S5 128 aa10.06□□□□□ -0.8
CDRT1-204ENST00000395906 FGFR1P11362 822 aa10.06□□□□□ -0.8
CDRT1-204ENST00000395906 CYP7A1P22680 504 aa10.06□□□□□ -0.8
CDRT1-204ENST00000395906 NR4A1P22736 598 aa10.06□□□□□ -0.8
CDRT1-204ENST00000395906 ADCY8P40145 1251 aa10.06□□□□□ -0.8
CDRT1-204ENST00000395906 ZNF135P52742 658 aaPredicted RBP10.06□□□□□ -0.8
CDRT1-204ENST00000395906 GK3PQ14409 553 aa10.06□□□□□ -0.8
CDRT1-204ENST00000395906 NAALADL2Q58DX5 795 aa10.06□□□□□ -0.8
CDRT1-204ENST00000395906 ARL6IP4Q66PJ3 421 aaKnown RBP10.06□□□□□ -0.8
CDRT1-204ENST00000395906 SCARA3Q6AZY7 606 aa10.06□□□□□ -0.8
CDRT1-204ENST00000395906 TTC27Q6P3X3 843 aa10.06□□□□□ -0.8
CDRT1-204ENST00000395906 XKR5Q6UX68 686 aa10.06□□□□□ -0.8
CDRT1-204ENST00000395906 RNF19BQ6ZMZ0 732 aa10.06□□□□□ -0.8
CDRT1-204ENST00000395906 AGMOQ6ZNB7 445 aa10.06□□□□□ -0.8
CDRT1-204ENST00000395906 CENPUQ71F23 418 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms