RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 MRPS31Q92665 395 aaKnown RBP5.64□□□□□ -1.51
VPS13C-204ENST00000395898 DNAJC7Q99615 494 aa5.64□□□□□ -1.51
VPS13C-204ENST00000395898 ZSWIM1Q9BR11 485 aa5.64□□□□□ -1.51
VPS13C-204ENST00000395898 PALMDQ9NP74 551 aa5.64□□□□□ -1.51
VPS13C-204ENST00000395898 PXMP2Q9NR77 195 aa5.64□□□□□ -1.51
VPS13C-204ENST00000395898 B2RBV5 119 aa5.64□□□□□ -1.51
VPS13C-204ENST00000395898 CES2O00748 559 aa5.64□□□□□ -1.51
VPS13C-204ENST00000395898 SLC37A4O43826 429 aa5.64□□□□□ -1.51
VPS13C-204ENST00000395898 VHLP40337 213 aa5.64□□□□□ -1.51
VPS13C-204ENST00000395898 MAP3K7CLP57077 242 aa5.64□□□□□ -1.51
VPS13C-204ENST00000395898 NFE2Q16621 373 aaPredicted RBP5.64□□□□□ -1.51
VPS13C-204ENST00000395898 BTNL9Q6UXG8 535 aa5.64□□□□□ -1.51
VPS13C-204ENST00000395898 TMEM176AQ96HP8 235 aa5.64□□□□□ -1.51
VPS13C-204ENST00000395898 RPRD1AQ96P16 312 aaPredicted RBP5.64□□□□□ -1.51
VPS13C-204ENST00000395898 THUMPD3Q9BV44 507 aaKnown RBP5.64□□□□□ -1.51
VPS13C-204ENST00000395898 APOL5Q9BWW9 433 aa5.64□□□□□ -1.51
VPS13C-204ENST00000395898 CLPBQ9H078 707 aa5.64□□□□□ -1.51
VPS13C-204ENST00000395898 ANKRD26Q9UPS8 1709 aa5.64□□□□□ -1.51
VPS13C-204ENST00000395898 KCNA3P22001 575 aa5.64□□□□□ -1.51
VPS13C-204ENST00000395898 GRK2P25098 689 aa5.64□□□□□ -1.51
VPS13C-204ENST00000395898 KLK7P49862 253 aa5.64□□□□□ -1.51
VPS13C-204ENST00000395898 BLVRAP53004 296 aa5.64□□□□□ -1.51
VPS13C-204ENST00000395898 ACTN3Q08043 901 aaPredicted RBP5.64□□□□□ -1.51
VPS13C-204ENST00000395898 SMAD1Q15797 465 aaKnown RBP5.64□□□□□ -1.51
VPS13C-204ENST00000395898 RSPH1Q8WYR4 309 aa5.64□□□□□ -1.51
VPS13C-204ENST00000395898 TUBGCP3Q96CW5 907 aa5.64□□□□□ -1.51
VPS13C-204ENST00000395898 YME1L1Q96TA2 773 aa5.64□□□□□ -1.51
VPS13C-204ENST00000395898 FAM167BQ9BTA0 163 aa5.64□□□□□ -1.51
VPS13C-204ENST00000395898 EPC1Q9H2F5 836 aa5.64□□□□□ -1.51
VPS13C-204ENST00000395898 PHF20L1A8MW92 1017 aa5.64□□□□□ -1.51
VPS13C-204ENST00000395898 M0R3G1 203 aa5.64□□□□□ -1.51
VPS13C-204ENST00000395898 VPS26AO75436 327 aa5.64□□□□□ -1.51
VPS13C-204ENST00000395898 ALOX15P16050 662 aaPredicted RBP5.64□□□□□ -1.51
VPS13C-204ENST00000395898 RRM2P31350 389 aa5.64□□□□□ -1.51
VPS13C-204ENST00000395898 USP49Q70CQ1 688 aa5.64□□□□□ -1.51
VPS13C-204ENST00000395898 IPPQ9Y573 584 aa5.64□□□□□ -1.51
VPS13C-204ENST00000395898 ADGRA3Q8IWK6 1321 aa5.64□□□□□ -1.51
VPS13C-204ENST00000395898 C2CD2LO14523 706 aa5.64□□□□□ -1.51
VPS13C-204ENST00000395898 CYB561D2O14569 222 aa5.64□□□□□ -1.51
VPS13C-204ENST00000395898 TFRCP02786 760 aaKnown RBP5.64□□□□□ -1.51
VPS13C-204ENST00000395898 ACO1P21399 889 aaKnown RBP5.64□□□□□ -1.51
VPS13C-204ENST00000395898 NUDT2P50583 147 aa5.64□□□□□ -1.51
VPS13C-204ENST00000395898 DSG1Q02413 1049 aa5.64□□□□□ -1.51
VPS13C-204ENST00000395898 DNAJC3Q13217 504 aa5.64□□□□□ -1.51
VPS13C-204ENST00000395898 CYLC2Q14093 348 aaPredicted RBP5.64□□□□□ -1.51
VPS13C-204ENST00000395898 ZNF284Q2VY69 593 aa5.64□□□□□ -1.51
VPS13C-204ENST00000395898 RAD9BQ6WBX8 426 aa5.64□□□□□ -1.51
VPS13C-204ENST00000395898 FBXL16Q8N461 479 aa5.64□□□□□ -1.51
VPS13C-204ENST00000395898 C1orf131Q8NDD1 294 aaKnown RBP5.64□□□□□ -1.51
VPS13C-204ENST00000395898 RFWD2Q8NHY2 731 aa5.64□□□□□ -1.51
VPS13C-204ENST00000395898 F8VZ95 297 aa5.63□□□□□ -1.51
VPS13C-204ENST00000395898 STRNO43815 780 aa5.63□□□□□ -1.51
VPS13C-204ENST00000395898 KCNJ1P48048 391 aa5.63□□□□□ -1.51
VPS13C-204ENST00000395898 IRAK1P51617 712 aa5.63□□□□□ -1.51
VPS13C-204ENST00000395898 PRKAA2P54646 552 aa5.63□□□□□ -1.51
VPS13C-204ENST00000395898 ANTXR2P58335 489 aa5.63□□□□□ -1.51
VPS13C-204ENST00000395898 ADRM1Q16186 407 aa5.63□□□□□ -1.51
VPS13C-204ENST00000395898 AMHR2Q16671 573 aa5.63□□□□□ -1.51
VPS13C-204ENST00000395898 BLOC1S5Q8TDH9 187 aa5.63□□□□□ -1.51
VPS13C-204ENST00000395898 USE1Q9NZ43 259 aa5.63□□□□□ -1.51
VPS13C-204ENST00000395898 AP4S1Q9Y587 144 aa5.63□□□□□ -1.51
VPS13C-204ENST00000395898 RBP1P09455 135 aa5.63□□□□□ -1.51
VPS13C-204ENST00000395898 TCF3P15923 654 aa5.63□□□□□ -1.51
VPS13C-204ENST00000395898 TCN1P20061 433 aaPredicted RBP5.63□□□□□ -1.51
VPS13C-204ENST00000395898 CALB2P22676 271 aa5.63□□□□□ -1.51
VPS13C-204ENST00000395898 CAMK2GQ13555 558 aaPredicted RBP5.63□□□□□ -1.51
VPS13C-204ENST00000395898 ACAP1Q15027 740 aa5.63□□□□□ -1.51
VPS13C-204ENST00000395898 IFNEQ86WN2 208 aa5.63□□□□□ -1.51
VPS13C-204ENST00000395898 KIAA2013Q8IYS2 634 aa5.63□□□□□ -1.51
VPS13C-204ENST00000395898 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.63□□□□□ -1.51
VPS13C-204ENST00000395898 TMC2Q8TDI7 906 aa5.63□□□□□ -1.51
VPS13C-204ENST00000395898 VPS50Q96JG6 964 aa5.63□□□□□ -1.51
VPS13C-204ENST00000395898 TAAR1Q96RJ0 339 aa5.63□□□□□ -1.51
VPS13C-204ENST00000395898 ENTPD7Q9NQZ7 604 aa5.63□□□□□ -1.51
VPS13C-204ENST00000395898 DDX28Q9NUL7 540 aaKnown RBP5.63□□□□□ -1.51
VPS13C-204ENST00000395898 FAM205CA6NFA0 338 aa5.63□□□□□ -1.51
VPS13C-204ENST00000395898 ZW10O43264 779 aa5.63□□□□□ -1.51
VPS13C-204ENST00000395898 MYO1HQ8N1T3 1032 aa5.63□□□□□ -1.51
VPS13C-204ENST00000395898 ENGASEQ8NFI3 743 aa5.63□□□□□ -1.51
VPS13C-204ENST00000395898 SIKE1Q9BRV8 207 aa5.63□□□□□ -1.51
VPS13C-204ENST00000395898 HPS5Q9UPZ3 1129 aa5.63□□□□□ -1.51
VPS13C-204ENST00000395898 TTLL13PA6NNM8 815 aa5.63□□□□□ -1.51
VPS13C-204ENST00000395898 E7ENQ6 273 aa5.63□□□□□ -1.51
VPS13C-204ENST00000395898 TK2O00142 265 aa5.63□□□□□ -1.51
VPS13C-204ENST00000395898 URODP06132 367 aa5.63□□□□□ -1.51
VPS13C-204ENST00000395898 CHI3L1P36222 383 aaPredicted RBP5.63□□□□□ -1.51
VPS13C-204ENST00000395898 CCNG2Q16589 344 aa5.63□□□□□ -1.51
VPS13C-204ENST00000395898 CCDC153Q494R4 210 aa5.63□□□□□ -1.51
VPS13C-204ENST00000395898 ARID3BQ8IVW6 561 aaPredicted RBP5.63□□□□□ -1.51
VPS13C-204ENST00000395898 KRT78Q8N1N4 520 aa5.63□□□□□ -1.51
VPS13C-204ENST00000395898 DNAJC9Q8WXX5 260 aa5.63□□□□□ -1.51
VPS13C-204ENST00000395898 ANKRD7Q92527 254 aa5.63□□□□□ -1.51
VPS13C-204ENST00000395898 ATG4CQ96DT6 458 aa5.63□□□□□ -1.51
VPS13C-204ENST00000395898 ARMC7Q9H6L4 198 aa5.63□□□□□ -1.51
VPS13C-204ENST00000395898 NDUFA13Q9P0J0 144 aa5.63□□□□□ -1.51
VPS13C-204ENST00000395898 CTNNAL1Q9UBT7 734 aa5.63□□□□□ -1.51
VPS13C-204ENST00000395898 GGT7Q9UJ14 662 aa5.63□□□□□ -1.51
VPS13C-204ENST00000395898 VANGL2Q9ULK5 521 aa5.63□□□□□ -1.51
VPS13C-204ENST00000395898 SERPINI2O75830 405 aa5.63□□□□□ -1.51
VPS13C-204ENST00000395898 RASSF9O75901 435 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms