RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 GRIA2P42262 883 aa22.48■■□□□ 1.19
TRAF4-203ENST00000394925 KIR2DL1P43626 348 aaPredicted RBP22.48■■□□□ 1.19
TRAF4-203ENST00000394925 DDX42Q86XP3 938 aaKnown RBP eCLIP22.48■■□□□ 1.193e-8■■■□□ 16.5
TRAF4-203ENST00000394925 KDF1Q8NAX2 398 aaPredicted RBP22.48■■□□□ 1.19
TRAF4-203ENST00000394925 SCNM1Q9BWG6 230 aa22.48■■□□□ 1.19
TRAF4-203ENST00000394925 TMEM121BQ9BXQ6 578 aaPredicted RBP22.48■■□□□ 1.19
TRAF4-203ENST00000394925 DPEP3Q9H4B8 488 aa22.48■■□□□ 1.19
TRAF4-203ENST00000394925 KIAA1586Q9HCI6 787 aa22.48■■□□□ 1.19
TRAF4-203ENST00000394925 ATRXP46100 2492 aa22.47■■□□□ 1.19
TRAF4-203ENST00000394925 A0A0A0MRY4 1105 aa22.47■■□□□ 1.19
TRAF4-203ENST00000394925 TCRBV21S2A2A0A5A6 115 aa22.47■■□□□ 1.19
TRAF4-203ENST00000394925 ADAM23O75077 832 aa22.47■■□□□ 1.19
TRAF4-203ENST00000394925 TACC1O75410 805 aa22.47■■□□□ 1.19
TRAF4-203ENST00000394925 TNFRSF4P43489 277 aa22.47■■□□□ 1.19
TRAF4-203ENST00000394925 TNNC1P63316 161 aa22.47■■□□□ 1.19
TRAF4-203ENST00000394925 MAP7D1Q3KQU3 841 aa22.47■■□□□ 1.19
TRAF4-203ENST00000394925 WDR72Q3MJ13 1102 aa22.47■■□□□ 1.19
TRAF4-203ENST00000394925 LY6G5CQ5SRR4 150 aa22.47■■□□□ 1.19
TRAF4-203ENST00000394925 SYT12Q8IV01 421 aa22.47■■□□□ 1.19
TRAF4-203ENST00000394925 ELOVL4Q9GZR5 314 aa22.47■■□□□ 1.19
TRAF4-203ENST00000394925 TBC1D14Q9P2M4 693 aa22.47■■□□□ 1.19
TRAF4-203ENST00000394925 ATXN2Q99700 1313 aaKnown RBP22.47■■□□□ 1.19
TRAF4-203ENST00000394925 PALM2-AKAP2B1ALY0 433 aaPredicted RBP22.46■■□□□ 1.19
TRAF4-203ENST00000394925 ENGP17813 658 aa22.46■■□□□ 1.19
TRAF4-203ENST00000394925 YWHAQP27348 245 aa22.46■■□□□ 1.19
TRAF4-203ENST00000394925 SNRNP35Q16560 246 aaKnown RBP22.46■■□□□ 1.19
TRAF4-203ENST00000394925 KIAA1211LQ6NV74 962 aa22.46■■□□□ 1.19
TRAF4-203ENST00000394925 NUP93Q8N1F7 819 aa22.46■■□□□ 1.19
TRAF4-203ENST00000394925 NAT16Q8N8M0 369 aa22.46■■□□□ 1.19
TRAF4-203ENST00000394925 FBXO32Q969P5 355 aa22.46■■□□□ 1.19
TRAF4-203ENST00000394925 USP28Q96RU2 1077 aa22.46■■□□□ 1.19
TRAF4-203ENST00000394925 B3GNT5Q9BYG0 378 aa22.46■■□□□ 1.19
TRAF4-203ENST00000394925 PLXND1Q9Y4D7 1925 aa22.46■■□□□ 1.19
TRAF4-203ENST00000394925 E2F8A0AVK6 867 aa22.45■■□□□ 1.18
TRAF4-203ENST00000394925 TBC1D3BA6NDS4 549 aa22.45■■□□□ 1.18
TRAF4-203ENST00000394925 A8MXQ7 604 aa22.45■■□□□ 1.18
TRAF4-203ENST00000394925 FAM163BP0C2L3 166 aa22.45■■□□□ 1.18
TRAF4-203ENST00000394925 GAD2Q05329 585 aa22.45■■□□□ 1.18
TRAF4-203ENST00000394925 CUL4AQ13619 759 aa22.45■■□□□ 1.18
TRAF4-203ENST00000394925 BYSLQ13895 437 aaKnown RBP22.45■■□□□ 1.18
TRAF4-203ENST00000394925 SLC39A14Q15043 492 aa22.45■■□□□ 1.18
TRAF4-203ENST00000394925 LYSMD4Q5XG99 296 aa22.45■■□□□ 1.18
TRAF4-203ENST00000394925 B3GALNT2Q8NCR0 500 aa22.45■■□□□ 1.18
TRAF4-203ENST00000394925 CCDC127Q96BQ5 260 aa22.45■■□□□ 1.18
TRAF4-203ENST00000394925 CGRRF1Q99675 332 aa22.45■■□□□ 1.18
TRAF4-203ENST00000394925 SLC32A1Q9H598 525 aa22.45■■□□□ 1.18
TRAF4-203ENST00000394925 NXF1Q9UBU9 619 aaKnown RBP22.45■■□□□ 1.18
TRAF4-203ENST00000394925 CHORDC1Q9UHD1 332 aaPredicted RBP22.45■■□□□ 1.18
TRAF4-203ENST00000394925 CEP192Q8TEP8 1941 aa22.45■■□□□ 1.18
TRAF4-203ENST00000394925 ADAMTS9Q9P2N4 1935 aa22.45■■□□□ 1.18
TRAF4-203ENST00000394925 CLIC2O15247 247 aa22.44■■□□□ 1.18
TRAF4-203ENST00000394925 COCHO43405 550 aa22.44■■□□□ 1.18
TRAF4-203ENST00000394925 RTN3O95197 1032 aaPredicted RBP22.44■■□□□ 1.18
TRAF4-203ENST00000394925 CFIP05156 583 aa22.44■■□□□ 1.18
TRAF4-203ENST00000394925 SYT1P21579 422 aa22.44■■□□□ 1.18
TRAF4-203ENST00000394925 ITPKAP23677 461 aa22.44■■□□□ 1.18
TRAF4-203ENST00000394925 CYP2J2P51589 502 aa22.44■■□□□ 1.18
TRAF4-203ENST00000394925 PSMD6Q15008 389 aa22.44■■□□□ 1.18
TRAF4-203ENST00000394925 BTBD8Q5XKL5 378 aa22.44■■□□□ 1.18
TRAF4-203ENST00000394925 SLC23A3Q6PIS1 610 aa22.44■■□□□ 1.18
TRAF4-203ENST00000394925 PHTF2Q8N3S3 785 aa22.44■■□□□ 1.18
TRAF4-203ENST00000394925 PDZD8Q8NEN9 1154 aa22.44■■□□□ 1.18
TRAF4-203ENST00000394925 GATA6Q92908 595 aa22.44■■□□□ 1.18
TRAF4-203ENST00000394925 ZFRQ96KR1 1074 aaKnown RBP22.44■■□□□ 1.18
TRAF4-203ENST00000394925 TNMDQ9H2S6 317 aa22.44■■□□□ 1.18
TRAF4-203ENST00000394925 FSCN3Q9NQT6 498 aa22.44■■□□□ 1.18
TRAF4-203ENST00000394925 AGPAT3Q9NRZ7 376 aa22.44■■□□□ 1.18
TRAF4-203ENST00000394925 PILRBQ9UKJ0 227 aa22.44■■□□□ 1.18
TRAF4-203ENST00000394925 SH3BP1Q9Y3L3 701 aa22.44■■□□□ 1.18
TRAF4-203ENST00000394925 BAHCC1Q9P281 2608 aa22.44■■□□□ 1.18
TRAF4-203ENST00000394925 WDFY3Q8IZQ1 3526 aa22.43■■□□□ 1.18
TRAF4-203ENST00000394925 TMEM8BA6NDV4 472 aa22.43■■□□□ 1.18
TRAF4-203ENST00000394925 EIF3DO15371 548 aaKnown RBP eCLIP22.43■■□□□ 1.18
TRAF4-203ENST00000394925 MYL6P60660 151 aa22.43■■□□□ 1.18
TRAF4-203ENST00000394925 CYP24A1Q07973 514 aa22.43■■□□□ 1.18
TRAF4-203ENST00000394925 TRPC3Q13507 836 aa22.43■■□□□ 1.18
TRAF4-203ENST00000394925 SPDYCQ5MJ68 293 aa22.43■■□□□ 1.18
TRAF4-203ENST00000394925 HECTD3Q5T447 861 aa22.43■■□□□ 1.18
TRAF4-203ENST00000394925 DEFB119Q8N690 84 aa22.43■■□□□ 1.18
TRAF4-203ENST00000394925 ZNF513Q8N8E2 541 aaPredicted RBP22.43■■□□□ 1.18
TRAF4-203ENST00000394925 SCAMP5Q8TAC9 235 aa22.43■■□□□ 1.18
TRAF4-203ENST00000394925 ZNF507Q8TCN5 953 aa22.43■■□□□ 1.18
TRAF4-203ENST00000394925 OTUB2Q96DC9 234 aa22.43■■□□□ 1.18
TRAF4-203ENST00000394925 KCNK16Q96T55 309 aa22.43■■□□□ 1.18
TRAF4-203ENST00000394925 LRRC27Q9C0I9 530 aa22.43■■□□□ 1.18
TRAF4-203ENST00000394925 MORC2Q9Y6X9 1032 aaPredicted RBP22.43■■□□□ 1.18
TRAF4-203ENST00000394925 PKD1L2Q7Z442 2459 aa22.43■■□□□ 1.18
TRAF4-203ENST00000394925 SPAARA0A1B0GVQ0 90 aa22.42■■□□□ 1.18
TRAF4-203ENST00000394925 TGFB1I1O43294 461 aa22.42■■□□□ 1.18
TRAF4-203ENST00000394925 HYAL3O43820 417 aaPredicted RBP22.42■■□□□ 1.18
TRAF4-203ENST00000394925 TULP3O75386 442 aa22.42■■□□□ 1.18
TRAF4-203ENST00000394925 DPP6P42658 865 aa22.42■■□□□ 1.18
TRAF4-203ENST00000394925 ATXN3P54252 364 aaPredicted RBP22.42■■□□□ 1.18
TRAF4-203ENST00000394925 ASIC1P78348 528 aa22.42■■□□□ 1.18
TRAF4-203ENST00000394925 ANO4Q32M45 955 aa22.42■■□□□ 1.18
TRAF4-203ENST00000394925 EPM2AIP1Q7L775 607 aaPredicted RBP22.42■■□□□ 1.18
TRAF4-203ENST00000394925 BBS7Q8IWZ6 715 aa22.42■■□□□ 1.18
TRAF4-203ENST00000394925 ETFBKMTQ8IXQ9 262 aa22.42■■□□□ 1.18
TRAF4-203ENST00000394925 OVCA2Q8WZ82 227 aa22.42■■□□□ 1.18
TRAF4-203ENST00000394925 ZNF516Q92618 1163 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms