RNA–Protein interactions for RNA: ENST00000394804.6

UBE2D3-209, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 4,166 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-209ENST00000394804 PRAMEF18Q5VWM3 479 aa12.13□□□□□ -0.47
UBE2D3-209ENST00000394804 DENND1BQ6P3S1 775 aa12.13□□□□□ -0.47
UBE2D3-209ENST00000394804 SCUBE1Q8IWY4 988 aa12.13□□□□□ -0.47
UBE2D3-209ENST00000394804 FAM13CQ8NE31 585 aa12.13□□□□□ -0.47
UBE2D3-209ENST00000394804 BEST2Q8NFU1 509 aa12.13□□□□□ -0.47
UBE2D3-209ENST00000394804 TEKT4Q8WW24 435 aa12.13□□□□□ -0.47
UBE2D3-209ENST00000394804 CLMNQ96JQ2 1002 aa12.13□□□□□ -0.47
UBE2D3-209ENST00000394804 HACL1Q9UJ83 578 aa12.13□□□□□ -0.47
UBE2D3-209ENST00000394804 SNX9Q9Y5X1 595 aa12.13□□□□□ -0.47
UBE2D3-209ENST00000394804 ENTPD5O75356 428 aa12.13□□□□□ -0.47
UBE2D3-209ENST00000394804 YBX3P16989 372 aaKnown RBP eCLIP12.13□□□□□ -0.471e-8■■□□□ 14.5
UBE2D3-209ENST00000394804 AQP5P55064 265 aa12.13□□□□□ -0.47
UBE2D3-209ENST00000394804 LAMTOR4Q0VGL1 99 aa12.13□□□□□ -0.47
UBE2D3-209ENST00000394804 ACAP1Q15027 740 aa12.13□□□□□ -0.47
UBE2D3-209ENST00000394804 HSP90AA5PQ58FG0 334 aa12.13□□□□□ -0.47
UBE2D3-209ENST00000394804 DPY19L2P1Q6NXN4 242 aa12.13□□□□□ -0.47
UBE2D3-209ENST00000394804 EFCAB12Q6NXP0 572 aa12.13□□□□□ -0.47
UBE2D3-209ENST00000394804 DRICH1Q6PGQ1 229 aaPredicted RBP12.13□□□□□ -0.47
UBE2D3-209ENST00000394804 CATSPER4Q7RTX7 472 aa12.13□□□□□ -0.47
UBE2D3-209ENST00000394804 TMEM176AQ96HP8 235 aa12.13□□□□□ -0.47
UBE2D3-209ENST00000394804 LRGUKQ96M69 825 aa12.13□□□□□ -0.47
UBE2D3-209ENST00000394804 EPB41L4BQ9H329 900 aa12.13□□□□□ -0.47
UBE2D3-209ENST00000394804 TNRC6CQ9HCJ0 1690 aaKnown RBP12.13□□□□□ -0.47
UBE2D3-209ENST00000394804 A0A0B4J269 797 aa12.12□□□□□ -0.47
UBE2D3-209ENST00000394804 CFLARO15519 480 aa12.12□□□□□ -0.47
UBE2D3-209ENST00000394804 SLC34A1Q06495 639 aa12.12□□□□□ -0.47
UBE2D3-209ENST00000394804 ART3Q13508 389 aa12.12□□□□□ -0.47
UBE2D3-209ENST00000394804 CUL3Q13618 768 aa12.12□□□□□ -0.47
UBE2D3-209ENST00000394804 BMPR2Q13873 1038 aa12.12□□□□□ -0.47
UBE2D3-209ENST00000394804 GOLGA7BQ2TAP0 167 aa12.12□□□□□ -0.47
UBE2D3-209ENST00000394804 C1orf220Q5T0J3 134 aa12.12□□□□□ -0.47
UBE2D3-209ENST00000394804 RNASEH2BQ5TBB1 312 aaKnown RBP12.12□□□□□ -0.47
UBE2D3-209ENST00000394804 ARMCX2Q7L311 632 aa12.12□□□□□ -0.47
UBE2D3-209ENST00000394804 ANKS1BQ7Z6G8 1248 aa12.12□□□□□ -0.47
UBE2D3-209ENST00000394804 TMPRSS6Q8IU80 811 aa12.12□□□□□ -0.47
UBE2D3-209ENST00000394804 DNERQ8NFT8 737 aa12.12□□□□□ -0.47
UBE2D3-209ENST00000394804 DDX1Q92499 740 aaKnown RBP12.12□□□□□ -0.47
UBE2D3-209ENST00000394804 CYP3A43Q9HB55 503 aa12.12□□□□□ -0.47
UBE2D3-209ENST00000394804 GPATCH2LQ9NWQ4 482 aa12.12□□□□□ -0.47
UBE2D3-209ENST00000394804 EPS15L1Q9UBC2 864 aa12.12□□□□□ -0.47
UBE2D3-209ENST00000394804 POLIQ9UNA4 740 aa12.12□□□□□ -0.47
UBE2D3-209ENST00000394804 MAGEA13PA6NCF6 341 aa12.12□□□□□ -0.47
UBE2D3-209ENST00000394804 YDJCA8MPS7 323 aa12.12□□□□□ -0.47
UBE2D3-209ENST00000394804 SRGAP2BP0DMP2 458 aa12.12□□□□□ -0.47
UBE2D3-209ENST00000394804 RPS12P25398 132 aaKnown RBP12.12□□□□□ -0.47
UBE2D3-209ENST00000394804 ADORA2BP29275 332 aa12.12□□□□□ -0.47
UBE2D3-209ENST00000394804 GCLCP48506 637 aaPredicted RBP12.12□□□□□ -0.47
UBE2D3-209ENST00000394804 EFHC2Q5JST6 749 aa12.12□□□□□ -0.47
UBE2D3-209ENST00000394804 NBPF12Q5TAG4 269 aaPredicted RBP12.12□□□□□ -0.47
UBE2D3-209ENST00000394804 PGBD4Q96DM1 585 aa12.12□□□□□ -0.47
UBE2D3-209ENST00000394804 OLFM3Q96PB7 478 aa12.12□□□□□ -0.47
UBE2D3-209ENST00000394804 FAM49BQ9NUQ9 324 aa12.12□□□□□ -0.47
UBE2D3-209ENST00000394804 TAGLN3Q9UI15 199 aa12.12□□□□□ -0.47
UBE2D3-209ENST00000394804 EFR3BQ9Y2G0 817 aa12.12□□□□□ -0.47
UBE2D3-209ENST00000394804 UMODL1Q5DID0 1318 aa12.12□□□□□ -0.47
UBE2D3-209ENST00000394804 CREB3O43889 395 aa12.12□□□□□ -0.47
UBE2D3-209ENST00000394804 HBP1O60381 514 aa12.12□□□□□ -0.47
UBE2D3-209ENST00000394804 CXCL8P10145 99 aa12.12□□□□□ -0.47
UBE2D3-209ENST00000394804 PTDSS1P48651 473 aaKnown RBP12.12□□□□□ -0.47
UBE2D3-209ENST00000394804 TRMT5Q32P41 509 aaKnown RBP12.12□□□□□ -0.47
UBE2D3-209ENST00000394804 MMEL1Q495T6 779 aa12.12□□□□□ -0.47
UBE2D3-209ENST00000394804 DCPSQ96C86 337 aaKnown RBP12.12□□□□□ -0.47
UBE2D3-209ENST00000394804 STRA6Q9BX79 667 aa12.12□□□□□ -0.47
UBE2D3-209ENST00000394804 XPNPEP1Q9NQW7 623 aa12.12□□□□□ -0.47
UBE2D3-209ENST00000394804 KIAA1257Q9ULG3 409 aa12.12□□□□□ -0.47
UBE2D3-209ENST00000394804 STAP1Q9ULZ2 295 aa12.12□□□□□ -0.47
UBE2D3-209ENST00000394804 CHKBQ9Y259 395 aa12.12□□□□□ -0.47
UBE2D3-209ENST00000394804 COMMD10Q9Y6G5 202 aa12.12□□□□□ -0.47
UBE2D3-209ENST00000394804 GPC4O75487 556 aa12.11□□□□□ -0.47
UBE2D3-209ENST00000394804 TXNP10599 105 aaKnown RBP12.11□□□□□ -0.47
UBE2D3-209ENST00000394804 CDKN2BP42772 138 aa12.11□□□□□ -0.47
UBE2D3-209ENST00000394804 CDH8P55286 799 aa12.11□□□□□ -0.47
UBE2D3-209ENST00000394804 DGKZQ13574 1117 aa12.11□□□□□ -0.47
UBE2D3-209ENST00000394804 KPNB1Q14974 876 aaKnown RBP12.11□□□□□ -0.47
UBE2D3-209ENST00000394804 SIX1Q15475 284 aaPredicted RBP12.11□□□□□ -0.47
UBE2D3-209ENST00000394804 RHBDF2Q6PJF5 856 aa12.11□□□□□ -0.47
UBE2D3-209ENST00000394804 PID1Q7Z2X4 250 aa12.11□□□□□ -0.47
UBE2D3-209ENST00000394804 AAASQ9NRG9 546 aa12.11□□□□□ -0.47
UBE2D3-209ENST00000394804 ARMCX1Q9P291 453 aa12.11□□□□□ -0.47
UBE2D3-209ENST00000394804 GSTA2P09210 222 aa12.11□□□□□ -0.47
UBE2D3-209ENST00000394804 GMPSP49915 693 aaPredicted RBP12.11□□□□□ -0.47
UBE2D3-209ENST00000394804 CAPSQ13938 189 aa12.11□□□□□ -0.47
UBE2D3-209ENST00000394804 LRRC74BQ6ZQY2 392 aa12.11□□□□□ -0.47
UBE2D3-209ENST00000394804 CLNKQ7Z7G1 428 aa12.11□□□□□ -0.47
UBE2D3-209ENST00000394804 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.11□□□□□ -0.47
UBE2D3-209ENST00000394804 FAM172AQ8WUF8 416 aa12.11□□□□□ -0.47
UBE2D3-209ENST00000394804 C7orf43Q8WVR3 580 aa12.11□□□□□ -0.47
UBE2D3-209ENST00000394804 CMTM5Q96DZ9 223 aa12.11□□□□□ -0.47
UBE2D3-209ENST00000394804 APOBEC3GQ9HC16 384 aaKnown RBP12.11□□□□□ -0.47
UBE2D3-209ENST00000394804 PPP1R12AO14974 1030 aaPredicted RBP12.11□□□□□ -0.47
UBE2D3-209ENST00000394804 GLRA3O75311 464 aa12.11□□□□□ -0.47
UBE2D3-209ENST00000394804 UBTFL6P0CB48 400 aaPredicted RBP12.11□□□□□ -0.47
UBE2D3-209ENST00000394804 LCP1P13796 627 aa12.11□□□□□ -0.47
UBE2D3-209ENST00000394804 TNFSF9P41273 254 aa12.11□□□□□ -0.47
UBE2D3-209ENST00000394804 MED21Q13503 144 aa12.11□□□□□ -0.47
UBE2D3-209ENST00000394804 EFTUD2Q15029 972 aaKnown RBP eCLIP12.11□□□□□ -0.474e-8■■■■■ 30.7
UBE2D3-209ENST00000394804 DBN1Q16643 649 aa12.11□□□□□ -0.47
UBE2D3-209ENST00000394804 ABHD15Q6UXT9 468 aa12.11□□□□□ -0.47
UBE2D3-209ENST00000394804 PAXIP1Q6ZW49 1069 aaPredicted RBP12.11□□□□□ -0.47
UBE2D3-209ENST00000394804 ACAD11Q709F0 780 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 114 ms