RNA–Protein interactions for RNA: ENST00000394320.7

PPARGC1B-203, Transcript of PPARG coactivator 1 beta, humanhuman

TSL 1 (best) BASIC

Gene PPARGC1B, Length 4,803 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1B-203ENST00000394320 CDYLQ9Y232 598 aa14.94□□□□□ -0.02
PPARGC1B-203ENST00000394320 TRIM49D1C9J1S8 452 aa14.94□□□□□ -0.02
PPARGC1B-203ENST00000394320 PJA2O43164 708 aa14.94□□□□□ -0.02
PPARGC1B-203ENST00000394320 PRPF4O43172 522 aaKnown RBP eCLIP14.94□□□□□ -0.02
PPARGC1B-203ENST00000394320 CLASP2O75122 1294 aaKnown RBP14.94□□□□□ -0.02
PPARGC1B-203ENST00000394320 MAP3K7CLP57077 242 aa14.94□□□□□ -0.02
PPARGC1B-203ENST00000394320 AMPD2Q01433 879 aa14.94□□□□□ -0.02
PPARGC1B-203ENST00000394320 TATDN2Q93075 761 aa14.94□□□□□ -0.02
PPARGC1B-203ENST00000394320 TBC1D13Q9NVG8 400 aa14.94□□□□□ -0.02
PPARGC1B-203ENST00000394320 SLC25A13Q9UJS0 675 aa14.94□□□□□ -0.02
PPARGC1B-203ENST00000394320 SNX5Q9Y5X3 404 aa14.94□□□□□ -0.02
PPARGC1B-203ENST00000394320 SLC12A8A0AV02 714 aa14.94□□□□□ -0.02
PPARGC1B-203ENST00000394320 C2CD2LO14523 706 aa14.94□□□□□ -0.02
PPARGC1B-203ENST00000394320 RENBPP51606 427 aa14.94□□□□□ -0.02
PPARGC1B-203ENST00000394320 PIP4K2CQ8TBX8 421 aa14.94□□□□□ -0.02
PPARGC1B-203ENST00000394320 SERPINB11Q96P15 392 aa14.94□□□□□ -0.02
PPARGC1B-203ENST00000394320 PACSIN1Q9BY11 444 aa14.94□□□□□ -0.02
PPARGC1B-203ENST00000394320 TRMT6Q9UJA5 497 aaKnown RBP14.94□□□□□ -0.02
PPARGC1B-203ENST00000394320 SUPT3HB4E1H0 165 aa14.94□□□□□ -0.02
PPARGC1B-203ENST00000394320 CRTAMO95727 393 aa14.94□□□□□ -0.02
PPARGC1B-203ENST00000394320 SYF2O95926 243 aaKnown RBP14.94□□□□□ -0.02
PPARGC1B-203ENST00000394320 YWHAZP63104 245 aaKnown RBP14.94□□□□□ -0.02
PPARGC1B-203ENST00000394320 MEA1Q16626 185 aa14.94□□□□□ -0.02
PPARGC1B-203ENST00000394320 RGS9BPQ6ZS82 235 aa14.94□□□□□ -0.02
PPARGC1B-203ENST00000394320 LCA5Q86VQ0 697 aa14.94□□□□□ -0.02
PPARGC1B-203ENST00000394320 SH2D3CQ8N5H7 860 aa14.94□□□□□ -0.02
PPARGC1B-203ENST00000394320 FAM118BQ9BPY3 351 aa14.94□□□□□ -0.02
PPARGC1B-203ENST00000394320 SLC39A10Q9ULF5 831 aa14.94□□□□□ -0.02
PPARGC1B-203ENST00000394320 LYPLA2O95372 231 aa14.93□□□□□ -0.02
PPARGC1B-203ENST00000394320 CHRM3P20309 590 aa14.93□□□□□ -0.02
PPARGC1B-203ENST00000394320 PRKCIP41743 596 aa14.93□□□□□ -0.02
PPARGC1B-203ENST00000394320 NR2C2P49116 596 aa14.93□□□□□ -0.02
PPARGC1B-203ENST00000394320 SERPINB8P50452 374 aa14.93□□□□□ -0.02
PPARGC1B-203ENST00000394320 PTENP60484 403 aa14.93□□□□□ -0.02
PPARGC1B-203ENST00000394320 COBLL1Q53SF7 1204 aa14.93□□□□□ -0.02
PPARGC1B-203ENST00000394320 SYCP2LQ5T4T6 812 aa14.93□□□□□ -0.02
PPARGC1B-203ENST00000394320 ERMARDQ5T6L9 678 aa14.93□□□□□ -0.02
PPARGC1B-203ENST00000394320 FAM9CQ8IZT9 166 aa14.93□□□□□ -0.02
PPARGC1B-203ENST00000394320 CASKIN2Q8WXE0 1202 aa14.93□□□□□ -0.02
PPARGC1B-203ENST00000394320 UROC1Q96N76 676 aa14.93□□□□□ -0.02
PPARGC1B-203ENST00000394320 KNDC1Q76NI1 1749 aa14.93□□□□□ -0.02
PPARGC1B-203ENST00000394320 VPS26AO75436 327 aa14.93□□□□□ -0.02
PPARGC1B-203ENST00000394320 RHOCP08134 193 aa14.93□□□□□ -0.02
PPARGC1B-203ENST00000394320 LSP1P33241 339 aa14.93□□□□□ -0.02
PPARGC1B-203ENST00000394320 LRRC8EQ6NSJ5 796 aa14.93□□□□□ -0.02
PPARGC1B-203ENST00000394320 LVRNQ6Q4G3 990 aa14.93□□□□□ -0.02
PPARGC1B-203ENST00000394320 ZNF557Q8N988 423 aaPredicted RBP14.93□□□□□ -0.02
PPARGC1B-203ENST00000394320 SLC4A7Q9Y6M7 1214 aa14.93□□□□□ -0.02
PPARGC1B-203ENST00000394320 FMN2Q9NZ56 1722 aa14.93□□□□□ -0.02
PPARGC1B-203ENST00000394320 TUFMP49411 452 aaKnown RBP14.93□□□□□ -0.02
PPARGC1B-203ENST00000394320 VCPP55072 806 aaKnown RBP14.93□□□□□ -0.02
PPARGC1B-203ENST00000394320 TBX2Q13207 712 aaPredicted RBP14.93□□□□□ -0.02
PPARGC1B-203ENST00000394320 GRIK5Q16478 980 aa14.93□□□□□ -0.02
PPARGC1B-203ENST00000394320 FAM131BQ86XD5 332 aa14.93□□□□□ -0.02
PPARGC1B-203ENST00000394320 HAS1Q92839 578 aa14.93□□□□□ -0.02
PPARGC1B-203ENST00000394320 MANSC1Q9H8J5 431 aa14.93□□□□□ -0.02
PPARGC1B-203ENST00000394320 CYP4F11Q9HBI6 524 aa14.93□□□□□ -0.02
PPARGC1B-203ENST00000394320 ALG13Q9NP73 1137 aaKnown RBP14.93□□□□□ -0.02
PPARGC1B-203ENST00000394320 ENTPD7Q9NQZ7 604 aa14.93□□□□□ -0.02
PPARGC1B-203ENST00000394320 GID8Q9NWU2 228 aa14.93□□□□□ -0.02
PPARGC1B-203ENST00000394320 UXTQ9UBK9 157 aaPredicted RBP14.93□□□□□ -0.02
PPARGC1B-203ENST00000394320 CHORDC1Q9UHD1 332 aaPredicted RBP14.93□□□□□ -0.02
PPARGC1B-203ENST00000394320 IPPQ9Y573 584 aa14.93□□□□□ -0.02
PPARGC1B-203ENST00000394320 ROBO3Q96MS0 1386 aa14.93□□□□□ -0.02
PPARGC1B-203ENST00000394320 LACTBL1A8MY62 500 aa14.92□□□□□ -0.02
PPARGC1B-203ENST00000394320 H0Y3Z8 333 aa14.92□□□□□ -0.02
PPARGC1B-203ENST00000394320 RAP1GAPP47736 663 aa14.92□□□□□ -0.02
PPARGC1B-203ENST00000394320 SMAD1Q15797 465 aaKnown RBP14.92□□□□□ -0.02
PPARGC1B-203ENST00000394320 KBTBD12Q3ZCT8 623 aa14.92□□□□□ -0.02
PPARGC1B-203ENST00000394320 RETSATQ6NUM9 610 aa14.92□□□□□ -0.02
PPARGC1B-203ENST00000394320 NLRP9Q7RTR0 991 aa14.92□□□□□ -0.02
PPARGC1B-203ENST00000394320 CCDC60Q8IWA6 550 aaPredicted RBP14.92□□□□□ -0.02
PPARGC1B-203ENST00000394320 PGBD3Q8N328 593 aa14.92□□□□□ -0.02
PPARGC1B-203ENST00000394320 VPS37AQ8NEZ2 397 aa14.92□□□□□ -0.02
PPARGC1B-203ENST00000394320 ADGRE3Q9BY15 652 aa14.92□□□□□ -0.02
PPARGC1B-203ENST00000394320 MRPL46Q9H2W6 279 aaKnown RBP14.92□□□□□ -0.02
PPARGC1B-203ENST00000394320 PDGFCQ9NRA1 345 aa14.92□□□□□ -0.02
PPARGC1B-203ENST00000394320 CHCHD3Q9NX63 227 aaKnown RBP14.92□□□□□ -0.02
PPARGC1B-203ENST00000394320 TRHDEQ9UKU6 1024 aa14.92□□□□□ -0.02
PPARGC1B-203ENST00000394320 MAFO75444 373 aaPredicted RBP14.92□□□□□ -0.02
PPARGC1B-203ENST00000394320 ADCYAP1R1P41586 468 aa14.92□□□□□ -0.02
PPARGC1B-203ENST00000394320 PLA2G4AP47712 749 aa14.92□□□□□ -0.02
PPARGC1B-203ENST00000394320 EFEMP1Q12805 493 aa14.92□□□□□ -0.02
PPARGC1B-203ENST00000394320 ORC1Q13415 861 aa14.92□□□□□ -0.02
PPARGC1B-203ENST00000394320 RRM2BQ7LG56 351 aa14.92□□□□□ -0.02
PPARGC1B-203ENST00000394320 PRPF18Q99633 342 aaKnown RBP14.92□□□□□ -0.02
PPARGC1B-203ENST00000394320 FHDC1Q9C0D6 1143 aaPredicted RBP14.92□□□□□ -0.02
PPARGC1B-203ENST00000394320 NMRK1Q9NWW6 199 aa14.92□□□□□ -0.02
PPARGC1B-203ENST00000394320 A0A087X0B3 334 aa14.92□□□□□ -0.02
PPARGC1B-203ENST00000394320 SPATA31C2B4DYI2 1134 aa14.92□□□□□ -0.02
PPARGC1B-203ENST00000394320 IRF6O14896 467 aa14.92□□□□□ -0.02
PPARGC1B-203ENST00000394320 ITGALP20701 1170 aa14.92□□□□□ -0.02
PPARGC1B-203ENST00000394320 SOX10P56693 466 aa14.92□□□□□ -0.02
PPARGC1B-203ENST00000394320 HIST2H2ACQ16777 129 aaPredicted RBP14.92□□□□□ -0.02
PPARGC1B-203ENST00000394320 HIST2H2AA3Q6FI13 130 aa14.92□□□□□ -0.02
PPARGC1B-203ENST00000394320 RIN2Q8WYP3 895 aaPredicted RBP14.92□□□□□ -0.02
PPARGC1B-203ENST00000394320 RUBCNLQ9H714 662 aa14.92□□□□□ -0.02
PPARGC1B-203ENST00000394320 NPHS2Q9NP85 383 aa14.92□□□□□ -0.02
PPARGC1B-203ENST00000394320 CDH2P19022 906 aaPredicted RBP14.92□□□□□ -0.02
PPARGC1B-203ENST00000394320 CYP2C18P33260 490 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 131 ms