RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.68■□□□□ 0.1
MKS1-202ENST00000393119 RAB27AP51159 221 aa15.67■□□□□ 0.1
MKS1-202ENST00000393119 HDAC4P56524 1084 aa15.67■□□□□ 0.1
MKS1-202ENST00000393119 ADCY1Q08828 1119 aa15.67■□□□□ 0.1
MKS1-202ENST00000393119 TUSC3Q13454 348 aa15.67■□□□□ 0.1
MKS1-202ENST00000393119 PPP1R7Q15435 360 aa15.67■□□□□ 0.1
MKS1-202ENST00000393119 STILQ15468 1287 aa15.67■□□□□ 0.1
MKS1-202ENST00000393119 ODF2Q5BJF6 829 aa15.67■□□□□ 0.1
MKS1-202ENST00000393119 EMBQ6PCB8 327 aa15.67■□□□□ 0.1
MKS1-202ENST00000393119 SLC24A5Q71RS6 500 aa15.67■□□□□ 0.1
MKS1-202ENST00000393119 KCTD6Q8NC69 237 aa15.67■□□□□ 0.1
MKS1-202ENST00000393119 ADAM32Q8TC27 787 aa15.67■□□□□ 0.1
MKS1-202ENST00000393119 FNIP1Q8TF40 1166 aa15.67■□□□□ 0.1
MKS1-202ENST00000393119 CAVIN3Q969G5 261 aa15.67■□□□□ 0.1
MKS1-202ENST00000393119 NT5C1B-RDH14C9J2C7 533 aa15.67■□□□□ 0.1
MKS1-202ENST00000393119 RNF8O76064 485 aa15.67■□□□□ 0.1
MKS1-202ENST00000393119 KRT14P02533 472 aa15.67■□□□□ 0.1
MKS1-202ENST00000393119 SELPP16109 830 aa15.67■□□□□ 0.1
MKS1-202ENST00000393119 PECAM1P16284 738 aaPredicted RBP15.67■□□□□ 0.1
MKS1-202ENST00000393119 OR1G1P47890 313 aa15.67■□□□□ 0.1
MKS1-202ENST00000393119 DHX34Q14147 1143 aaKnown RBP15.67■□□□□ 0.1
MKS1-202ENST00000393119 SYPL2Q5VXT5 272 aa15.67■□□□□ 0.1
MKS1-202ENST00000393119 TMCO2Q7Z6W1 182 aaPredicted RBP15.67■□□□□ 0.1
MKS1-202ENST00000393119 DEFB128Q7Z7B8 93 aa15.67■□□□□ 0.1
MKS1-202ENST00000393119 SUGP1Q8IWZ8 645 aaKnown RBP15.67■□□□□ 0.1
MKS1-202ENST00000393119 RSPH1Q8WYR4 309 aa15.67■□□□□ 0.1
MKS1-202ENST00000393119 FAM149B1Q96BN6 582 aa15.67■□□□□ 0.1
MKS1-202ENST00000393119 PGBD4Q96DM1 585 aa15.67■□□□□ 0.1
MKS1-202ENST00000393119 CNPY3Q9BT09 278 aa15.67■□□□□ 0.1
MKS1-202ENST00000393119 TBC1D13Q9NVG8 400 aa15.67■□□□□ 0.1
MKS1-202ENST00000393119 ENPP3O14638 875 aa15.66■□□□□ 0.1
MKS1-202ENST00000393119 CST8O60676 142 aa15.66■□□□□ 0.1
MKS1-202ENST00000393119 AP1G2O75843 785 aa15.66■□□□□ 0.1
MKS1-202ENST00000393119 ECEL1O95672 775 aa15.66■□□□□ 0.1
MKS1-202ENST00000393119 AMHP03971 560 aa15.66■□□□□ 0.1
MKS1-202ENST00000393119 NPR3P17342 541 aa15.66■□□□□ 0.1
MKS1-202ENST00000393119 BDNFP23560 247 aa15.66■□□□□ 0.1
MKS1-202ENST00000393119 MNX1P50219 401 aaPredicted RBP15.66■□□□□ 0.1
MKS1-202ENST00000393119 GTF2A1P52655 376 aaPredicted RBP15.66■□□□□ 0.1
MKS1-202ENST00000393119 GRIK3Q13003 919 aa15.66■□□□□ 0.1
MKS1-202ENST00000393119 TFDP3Q5H9I0 405 aa15.66■□□□□ 0.1
MKS1-202ENST00000393119 FAM35AQ86V20 835 aa15.66■□□□□ 0.1
MKS1-202ENST00000393119 DEFB106AQ8N104 65 aa15.66■□□□□ 0.1
MKS1-202ENST00000393119 PYROXD2Q8N2H3 581 aa15.66■□□□□ 0.1
MKS1-202ENST00000393119 C12orf50Q8NA57 414 aaPredicted RBP15.66■□□□□ 0.1
MKS1-202ENST00000393119 UHMK1Q8TAS1 419 aaKnown RBP15.66■□□□□ 0.1
MKS1-202ENST00000393119 PPM1EQ8WY54 764 aa15.66■□□□□ 0.1
MKS1-202ENST00000393119 MYLPFQ96A32 169 aa15.66■□□□□ 0.1
MKS1-202ENST00000393119 TMEM121Q9BTD3 319 aa15.66■□□□□ 0.1
MKS1-202ENST00000393119 PLVAPQ9BX97 442 aa15.66■□□□□ 0.1
MKS1-202ENST00000393119 ASNSD1Q9NWL6 643 aa15.66■□□□□ 0.1
MKS1-202ENST00000393119 DNM1LO00429 736 aa15.65■□□□□ 0.1
MKS1-202ENST00000393119 HSPA6P17066 643 aa15.65■□□□□ 0.1
MKS1-202ENST00000393119 CYP2C18P33260 490 aa15.65■□□□□ 0.1
MKS1-202ENST00000393119 CDH6P55285 790 aa15.65■□□□□ 0.1
MKS1-202ENST00000393119 LRRC38Q5VT99 294 aa15.65■□□□□ 0.1
MKS1-202ENST00000393119 CCDC185Q8N715 623 aa15.65■□□□□ 0.1
MKS1-202ENST00000393119 ARL8AQ96BM9 186 aa15.65■□□□□ 0.1
MKS1-202ENST00000393119 RBM41Q96IZ5 413 aaKnown RBP15.65■□□□□ 0.1
MKS1-202ENST00000393119 TSPAN18Q96SJ8 248 aa15.65■□□□□ 0.1
MKS1-202ENST00000393119 TBCBQ99426 244 aa15.65■□□□□ 0.1
MKS1-202ENST00000393119 ATP8A1Q9Y2Q0 1164 aa15.65■□□□□ 0.1
MKS1-202ENST00000393119 CDH23Q9H251 3354 aa15.65■□□□□ 0.1
MKS1-202ENST00000393119 GOLGA6BA6NDN3 693 aa15.65■□□□□ 0.1
MKS1-202ENST00000393119 FAM187AA6NFU0 413 aa15.65■□□□□ 0.1
MKS1-202ENST00000393119 XPO1O14980 1071 aaKnown RBP15.65■□□□□ 0.1
MKS1-202ENST00000393119 LIASO43766 372 aa15.65■□□□□ 0.1
MKS1-202ENST00000393119 USP17L7P0C7H9 530 aa15.65■□□□□ 0.1
MKS1-202ENST00000393119 IVDP26440 423 aa15.65■□□□□ 0.1
MKS1-202ENST00000393119 SDC4P31431 198 aa15.65■□□□□ 0.1
MKS1-202ENST00000393119 RPL9P32969 192 aaKnown RBP15.65■□□□□ 0.1
MKS1-202ENST00000393119 HSD17B3P37058 310 aa15.65■□□□□ 0.1
MKS1-202ENST00000393119 PGFP49763 221 aa15.65■□□□□ 0.1
MKS1-202ENST00000393119 TKTL1P51854 596 aa15.65■□□□□ 0.1
MKS1-202ENST00000393119 GDF10P55107 478 aa15.65■□□□□ 0.1
MKS1-202ENST00000393119 DHX9Q08211 1270 aaKnown RBP15.65■□□□□ 0.1
MKS1-202ENST00000393119 IFRD2Q12894 506 aaPredicted RBP15.65■□□□□ 0.1
MKS1-202ENST00000393119 CUL1Q13616 776 aa15.65■□□□□ 0.1
MKS1-202ENST00000393119 GLB1LQ6UWU2 654 aa15.65■□□□□ 0.1
MKS1-202ENST00000393119 FAM124BQ9H5Z6 455 aaPredicted RBP15.65■□□□□ 0.1
MKS1-202ENST00000393119 SAGE1Q9NXZ1 904 aa15.65■□□□□ 0.1
MKS1-202ENST00000393119 ASIC3Q9UHC3 531 aa15.65■□□□□ 0.1
MKS1-202ENST00000393119 NAALADL1Q9UQQ1 740 aa15.65■□□□□ 0.1
MKS1-202ENST00000393119 MFHAS1Q9Y4C4 1052 aa15.65■□□□□ 0.1
MKS1-202ENST00000393119 YJEFN3A6XGL0 299 aa15.64■□□□□ 0.09
MKS1-202ENST00000393119 E7ENQ6 273 aa15.64■□□□□ 0.09
MKS1-202ENST00000393119 IL4RP24394 825 aa15.64■□□□□ 0.09
MKS1-202ENST00000393119 CHKAP35790 457 aa15.64■□□□□ 0.09
MKS1-202ENST00000393119 FNTAP49354 379 aa15.64■□□□□ 0.09
MKS1-202ENST00000393119 PLCB3Q01970 1234 aa15.64■□□□□ 0.09
MKS1-202ENST00000393119 RNASELQ05823 741 aaKnown RBP15.64■□□□□ 0.09
MKS1-202ENST00000393119 HADHQ16836 314 aaKnown RBP15.64■□□□□ 0.09
MKS1-202ENST00000393119 DCAF6Q58WW2 860 aa15.64■□□□□ 0.09
MKS1-202ENST00000393119 PPP6R3Q5H9R7 873 aaPredicted RBP15.64■□□□□ 0.09
MKS1-202ENST00000393119 NOMO2Q5JPE7 1267 aa15.64■□□□□ 0.09
MKS1-202ENST00000393119 SDHAF4Q5VUM1 108 aa15.64■□□□□ 0.09
MKS1-202ENST00000393119 FAM131BQ86XD5 332 aa15.64■□□□□ 0.09
MKS1-202ENST00000393119 RFX6Q8HWS3 928 aa15.64■□□□□ 0.09
MKS1-202ENST00000393119 CMASQ8NFW8 434 aaPredicted RBP15.64■□□□□ 0.09
MKS1-202ENST00000393119 RUBCNQ92622 972 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms