RNA–Protein interactions for RNA: ENST00000393043.5

CLTC-202, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best) BASIC

Gene CLTC, Length 5,292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-202ENST00000393043 NFE2Q16621 373 aaPredicted RBP13.09□□□□□ -0.31
CLTC-202ENST00000393043 ERMARDQ5T6L9 678 aa13.09□□□□□ -0.31
CLTC-202ENST00000393043 FAM131BQ86XD5 332 aa13.09□□□□□ -0.31
CLTC-202ENST00000393043 DNAAF5Q86Y56 855 aa13.09□□□□□ -0.31
CLTC-202ENST00000393043 EPS8L1Q8TE68 723 aa13.09□□□□□ -0.31
CLTC-202ENST00000393043 UBE2OQ9C0C9 1292 aaKnown RBP13.09□□□□□ -0.31
CLTC-202ENST00000393043 SNTG2Q9NY99 539 aa13.09□□□□□ -0.31
CLTC-202ENST00000393043 SNX5Q9Y5X3 404 aa13.09□□□□□ -0.31
CLTC-202ENST00000393043 TM9SF1O15321 606 aa13.09□□□□□ -0.31
CLTC-202ENST00000393043 RIPK2O43353 540 aa13.09□□□□□ -0.31
CLTC-202ENST00000393043 UPP2O95045 317 aa13.09□□□□□ -0.31
CLTC-202ENST00000393043 HMGCRP04035 888 aa13.09□□□□□ -0.31
CLTC-202ENST00000393043 MDH1BQ5I0G3 518 aa13.09□□□□□ -0.31
CLTC-202ENST00000393043 MFN1Q8IWA4 741 aa13.09□□□□□ -0.31
CLTC-202ENST00000393043 CCDC60Q8IWA6 550 aaPredicted RBP13.09□□□□□ -0.31
CLTC-202ENST00000393043 GLIS3Q8NEA6 775 aa13.09□□□□□ -0.31
CLTC-202ENST00000393043 CCDC126Q96EE4 140 aa13.09□□□□□ -0.31
CLTC-202ENST00000393043 OSBPL1AQ9BXW6 950 aa13.09□□□□□ -0.31
CLTC-202ENST00000393043 PRDM5Q9NQX1 630 aaPredicted RBP13.09□□□□□ -0.31
CLTC-202ENST00000393043 PMPCBO75439 489 aa13.08□□□□□ -0.31
CLTC-202ENST00000393043 EGFRP00533 1210 aa13.08□□□□□ -0.31
CLTC-202ENST00000393043 RARAP10276 462 aa13.08□□□□□ -0.31
CLTC-202ENST00000393043 UBA1P22314 1058 aaKnown RBP13.08□□□□□ -0.31
CLTC-202ENST00000393043 MAP4P27816 1152 aaKnown RBP13.08□□□□□ -0.31
CLTC-202ENST00000393043 INPP1P49441 399 aa13.08□□□□□ -0.31
CLTC-202ENST00000393043 HDAC4P56524 1084 aa13.08□□□□□ -0.31
CLTC-202ENST00000393043 KCNMA1Q12791 1236 aa13.08□□□□□ -0.31
CLTC-202ENST00000393043 TWF1Q12792 350 aa13.08□□□□□ -0.31
CLTC-202ENST00000393043 COL9A3Q14050 684 aaPredicted RBP13.08□□□□□ -0.31
CLTC-202ENST00000393043 MRNIPQ6NTE8 343 aa13.08□□□□□ -0.31
CLTC-202ENST00000393043 RAB42Q8N4Z0 105 aa13.08□□□□□ -0.31
CLTC-202ENST00000393043 RPRD1AQ96P16 312 aaPredicted RBP13.08□□□□□ -0.31
CLTC-202ENST00000393043 SEMA4AQ9H3S1 761 aa13.08□□□□□ -0.31
CLTC-202ENST00000393043 EEF1DP29692 281 aaKnown RBP13.08□□□□□ -0.32
CLTC-202ENST00000393043 ALDH7A1P49419 539 aaKnown RBP13.08□□□□□ -0.32
CLTC-202ENST00000393043 RPL10AP62906 217 aaKnown RBP13.08□□□□□ -0.32
CLTC-202ENST00000393043 AGAP9Q5VTM2 703 aa13.08□□□□□ -0.32
CLTC-202ENST00000393043 THTPAQ9BU02 230 aa13.08□□□□□ -0.32
CLTC-202ENST00000393043 CINPQ9BW66 212 aaPredicted RBP13.08□□□□□ -0.32
CLTC-202ENST00000393043 ILKAPQ9H0C8 392 aaPredicted RBP13.08□□□□□ -0.32
CLTC-202ENST00000393043 TRIM45Q9H8W5 580 aaPredicted RBP13.08□□□□□ -0.32
CLTC-202ENST00000393043 DRG1Q9Y295 367 aaKnown RBP13.08□□□□□ -0.32
CLTC-202ENST00000393043 CFAP99D6REC4 459 aa13.08□□□□□ -0.32
CLTC-202ENST00000393043 ENO3P13929 434 aaPredicted RBP13.08□□□□□ -0.32
CLTC-202ENST00000393043 CYP2F1P24903 491 aa13.08□□□□□ -0.32
CLTC-202ENST00000393043 RTP1P59025 263 aa13.08□□□□□ -0.32
CLTC-202ENST00000393043 PTRHD1Q6GMV3 140 aaKnown RBP13.08□□□□□ -0.32
CLTC-202ENST00000393043 WDR59Q6PJI9 974 aa13.08□□□□□ -0.32
CLTC-202ENST00000393043 RFX8Q6ZV50 586 aa13.08□□□□□ -0.32
CLTC-202ENST00000393043 PRPF39Q86UA1 669 aaKnown RBP13.08□□□□□ -0.32
CLTC-202ENST00000393043 KATNAL2Q8IYT4 538 aa13.08□□□□□ -0.32
CLTC-202ENST00000393043 TMEM161BQ8NDZ6 487 aa13.08□□□□□ -0.32
CLTC-202ENST00000393043 BAP1Q92560 729 aa13.08□□□□□ -0.32
CLTC-202ENST00000393043 SH3KBP1Q96B97 665 aa13.08□□□□□ -0.32
CLTC-202ENST00000393043 FOPNLQ96NB1 174 aa13.08□□□□□ -0.32
CLTC-202ENST00000393043 CASS4Q9NQ75 786 aa13.08□□□□□ -0.32
CLTC-202ENST00000393043 LATS2Q9NRM7 1088 aa13.08□□□□□ -0.32
CLTC-202ENST00000393043 ADORA2AP29274 412 aa13.08□□□□□ -0.32
CLTC-202ENST00000393043 TKTL1P51854 596 aa13.08□□□□□ -0.32
CLTC-202ENST00000393043 TMEM51Q9NW97 253 aa13.08□□□□□ -0.32
CLTC-202ENST00000393043 PKP3Q9Y446 797 aa13.08□□□□□ -0.32
CLTC-202ENST00000393043 NID2Q14112 1375 aa13.08□□□□□ -0.32
CLTC-202ENST00000393043 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.07□□□□□ -0.32
CLTC-202ENST00000393043 ARHGAP10A1A4S6 786 aa13.07□□□□□ -0.32
CLTC-202ENST00000393043 LACTBL1A8MY62 500 aa13.07□□□□□ -0.32
CLTC-202ENST00000393043 RALBP11234 206 aa13.07□□□□□ -0.32
CLTC-202ENST00000393043 ZNF177Q13360 481 aaPredicted RBP13.07□□□□□ -0.32
CLTC-202ENST00000393043 ARHGEF7Q14155 803 aa13.07□□□□□ -0.32
CLTC-202ENST00000393043 THEMIS2Q5TEJ8 643 aa13.07□□□□□ -0.32
CLTC-202ENST00000393043 IQSEC1Q6DN90 963 aa13.07□□□□□ -0.32
CLTC-202ENST00000393043 UNC45BQ8IWX7 931 aa13.07□□□□□ -0.32
CLTC-202ENST00000393043 FBXO32Q969P5 355 aa13.07□□□□□ -0.32
CLTC-202ENST00000393043 FAR2Q96K12 515 aa13.07□□□□□ -0.32
CLTC-202ENST00000393043 PPP1R36Q96LQ0 422 aa13.07□□□□□ -0.32
CLTC-202ENST00000393043 GPR63Q9BZJ6 419 aa13.07□□□□□ -0.32
CLTC-202ENST00000393043 BRD8Q9H0E9 1235 aa13.07□□□□□ -0.32
CLTC-202ENST00000393043 KCTD10Q9H3F6 313 aa13.07□□□□□ -0.32
CLTC-202ENST00000393043 RIC8BQ9NVN3 520 aa13.07□□□□□ -0.32
CLTC-202ENST00000393043 TSR3Q9UJK0 312 aaKnown RBP13.07□□□□□ -0.32
CLTC-202ENST00000393043 SUPT3HB4E1H0 165 aa13.07□□□□□ -0.32
CLTC-202ENST00000393043 F5H5T6 163 aa13.07□□□□□ -0.32
CLTC-202ENST00000393043 IGF2BP3O00425 579 aaKnown RBP eCLIP13.07□□□□□ -0.32
CLTC-202ENST00000393043 SUPT3HO75486 399 aa13.07□□□□□ -0.32
CLTC-202ENST00000393043 MICAL2O94851 1124 aa13.07□□□□□ -0.32
CLTC-202ENST00000393043 TNFRSF8P28908 595 aa13.07□□□□□ -0.32
CLTC-202ENST00000393043 RPL21P46778 160 aaKnown RBP13.07□□□□□ -0.32
CLTC-202ENST00000393043 NR2C2P49116 596 aa13.07□□□□□ -0.32
CLTC-202ENST00000393043 MARSP56192 900 aaKnown RBP13.07□□□□□ -0.32
CLTC-202ENST00000393043 MAP3K7CLP57077 242 aa13.07□□□□□ -0.32
CLTC-202ENST00000393043 PPIL2Q13356 520 aa13.07□□□□□ -0.32
CLTC-202ENST00000393043 USP50Q70EL3 339 aaPredicted RBP13.07□□□□□ -0.32
CLTC-202ENST00000393043 LRRN4CLQ8ND94 238 aa13.07□□□□□ -0.32
CLTC-202ENST00000393043 SYT15Q9BQS2 421 aa13.07□□□□□ -0.32
CLTC-202ENST00000393043 MTG1Q9BT17 334 aaPredicted RBP13.07□□□□□ -0.32
CLTC-202ENST00000393043 SLC40A1Q9NP59 571 aa13.07□□□□□ -0.32
CLTC-202ENST00000393043 IRAK4Q9NWZ3 460 aa13.07□□□□□ -0.32
CLTC-202ENST00000393043 CPA4Q9UI42 421 aa13.07□□□□□ -0.32
CLTC-202ENST00000393043 CACNA1FO60840 1977 aa13.07□□□□□ -0.32
CLTC-202ENST00000393043 DISP2A7MBM2 1401 aa13.07□□□□□ -0.32
CLTC-202ENST00000393043 AKAP12Q02952 1782 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms