RNA–Protein interactions for RNA: ENST00000392556.8

TRAF3IP2-208, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best) BASIC

Gene TRAF3IP2, Length 2,188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-208ENST00000392556 INTS9Q9NV88 658 aaKnown RBP11.98□□□□□ -0.49
TRAF3IP2-208ENST00000392556 WRAP73Q9P2S5 460 aaPredicted RBP11.98□□□□□ -0.49
TRAF3IP2-208ENST00000392556 STOML1Q9UBI4 398 aa11.98□□□□□ -0.49
TRAF3IP2-208ENST00000392556 ZNF148Q9UQR1 794 aa11.98□□□□□ -0.49
TRAF3IP2-208ENST00000392556 BIRC5O15392 142 aa11.98□□□□□ -0.49
TRAF3IP2-208ENST00000392556 TSPAN1O60635 241 aa11.98□□□□□ -0.49
TRAF3IP2-208ENST00000392556 ADH1AP07327 375 aa11.98□□□□□ -0.49
TRAF3IP2-208ENST00000392556 ITGA2BP08514 1039 aa11.98□□□□□ -0.49
TRAF3IP2-208ENST00000392556 NAT1P18440 290 aa11.98□□□□□ -0.49
TRAF3IP2-208ENST00000392556 MUTP22033 750 aa11.98□□□□□ -0.49
TRAF3IP2-208ENST00000392556 KLRC2P26717 231 aa11.98□□□□□ -0.49
TRAF3IP2-208ENST00000392556 ARL2P36404 184 aa11.98□□□□□ -0.49
TRAF3IP2-208ENST00000392556 MAP7Q14244 749 aa11.98□□□□□ -0.49
TRAF3IP2-208ENST00000392556 TRADDQ15628 312 aa11.98□□□□□ -0.49
TRAF3IP2-208ENST00000392556 CLPPQ16740 277 aaPredicted RBP11.98□□□□□ -0.49
TRAF3IP2-208ENST00000392556 ATP11CQ8NB49 1132 aa11.98□□□□□ -0.49
TRAF3IP2-208ENST00000392556 KREMEN2Q8NCW0 462 aa11.98□□□□□ -0.49
TRAF3IP2-208ENST00000392556 UBLCP1Q8WVY7 318 aaPredicted RBP11.98□□□□□ -0.49
TRAF3IP2-208ENST00000392556 MS4A14Q96JA4 679 aa11.98□□□□□ -0.49
TRAF3IP2-208ENST00000392556 COLEC11Q9BWP8 271 aa11.98□□□□□ -0.49
TRAF3IP2-208ENST00000392556 DCLRE1BQ9H816 532 aa11.98□□□□□ -0.49
TRAF3IP2-208ENST00000392556 TUFT1Q9NNX1 390 aa11.98□□□□□ -0.49
TRAF3IP2-208ENST00000392556 DBR1Q9UK59 544 aaKnown RBP11.98□□□□□ -0.49
TRAF3IP2-208ENST00000392556 USP20Q9Y2K6 914 aa11.98□□□□□ -0.49
TRAF3IP2-208ENST00000392556 STK24Q9Y6E0 443 aa11.98□□□□□ -0.49
TRAF3IP2-208ENST00000392556 TECTAO75443 2155 aa11.97□□□□□ -0.49
TRAF3IP2-208ENST00000392556 MUC6Q6W4X9 2439 aa11.97□□□□□ -0.49
TRAF3IP2-208ENST00000392556 NRP1O14786 923 aa11.97□□□□□ -0.49
TRAF3IP2-208ENST00000392556 LILRB3O75022 631 aa11.97□□□□□ -0.49
TRAF3IP2-208ENST00000392556 PAPLNO95428 1278 aa11.97□□□□□ -0.49
TRAF3IP2-208ENST00000392556 SHBGP04278 402 aa11.97□□□□□ -0.49
TRAF3IP2-208ENST00000392556 AVPR2P30518 371 aa11.97□□□□□ -0.49
TRAF3IP2-208ENST00000392556 GRIN1Q05586 938 aa11.97□□□□□ -0.49
TRAF3IP2-208ENST00000392556 DSC1Q08554 894 aa11.97□□□□□ -0.49
TRAF3IP2-208ENST00000392556 CTTNQ14247 550 aaKnown RBP11.97□□□□□ -0.49
TRAF3IP2-208ENST00000392556 RCN2Q14257 317 aa11.97□□□□□ -0.49
TRAF3IP2-208ENST00000392556 RILPL1Q5EBL4 403 aa11.97□□□□□ -0.49
TRAF3IP2-208ENST00000392556 RARS2Q5T160 578 aaKnown RBP11.97□□□□□ -0.49
TRAF3IP2-208ENST00000392556 RNF43Q68DV7 783 aa11.97□□□□□ -0.49
TRAF3IP2-208ENST00000392556 KLC3Q6P597 504 aa11.97□□□□□ -0.49
TRAF3IP2-208ENST00000392556 PPP4R3CPQ6ZMV5 832 aa11.97□□□□□ -0.49
TRAF3IP2-208ENST00000392556 TMC3Q7Z5M5 1100 aa11.97□□□□□ -0.49
TRAF3IP2-208ENST00000392556 TMEM173Q86WV6 379 aaPredicted RBP11.97□□□□□ -0.49
TRAF3IP2-208ENST00000392556 IRF2BP1Q8IU81 584 aa11.97□□□□□ -0.49
TRAF3IP2-208ENST00000392556 CCNJLQ8IV13 435 aa11.97□□□□□ -0.49
TRAF3IP2-208ENST00000392556 INPP5DQ92835 1189 aa11.97□□□□□ -0.49
TRAF3IP2-208ENST00000392556 OLFM3Q96PB7 478 aa11.97□□□□□ -0.49
TRAF3IP2-208ENST00000392556 NOX5Q96PH1 765 aa11.97□□□□□ -0.49
TRAF3IP2-208ENST00000392556 CENPKQ9BS16 269 aa11.97□□□□□ -0.49
TRAF3IP2-208ENST00000392556 MINDY3Q9H8M7 445 aa11.97□□□□□ -0.49
TRAF3IP2-208ENST00000392556 XPNPEP1Q9NQW7 623 aa11.97□□□□□ -0.49
TRAF3IP2-208ENST00000392556 NMRK1Q9NWW6 199 aa11.97□□□□□ -0.49
TRAF3IP2-208ENST00000392556 DNAJB4Q9UDY4 337 aa11.97□□□□□ -0.49
TRAF3IP2-208ENST00000392556 IPPQ9Y573 584 aa11.97□□□□□ -0.49
TRAF3IP2-208ENST00000392556 ZNF318Q5VUA4 2279 aa11.97□□□□□ -0.49
TRAF3IP2-208ENST00000392556 C2CD4DB7Z1M9 353 aa11.96□□□□□ -0.49
TRAF3IP2-208ENST00000392556 INO80B-WBP1J3KQ70 363 aa11.96□□□□□ -0.49
TRAF3IP2-208ENST00000392556 WNT7AO00755 349 aa11.96□□□□□ -0.49
TRAF3IP2-208ENST00000392556 HNRNPRO43390 633 aaKnown RBP11.96□□□□□ -0.49
TRAF3IP2-208ENST00000392556 DDHD2O94830 711 aa11.96□□□□□ -0.49
TRAF3IP2-208ENST00000392556 ALOX15P16050 662 aaPredicted RBP11.96□□□□□ -0.49
TRAF3IP2-208ENST00000392556 RARRES1P49788 294 aa11.96□□□□□ -0.49
TRAF3IP2-208ENST00000392556 CLCN4P51793 760 aa11.96□□□□□ -0.49
TRAF3IP2-208ENST00000392556 CYP4A11Q02928 519 aa11.96□□□□□ -0.49
TRAF3IP2-208ENST00000392556 CCDC149Q6ZUS6 474 aa11.96□□□□□ -0.49
TRAF3IP2-208ENST00000392556 ZNF280BQ86YH2 543 aa11.96□□□□□ -0.49
TRAF3IP2-208ENST00000392556 NOSTRINQ8IVI9 506 aa11.96□□□□□ -0.49
TRAF3IP2-208ENST00000392556 SLC15A3Q8IY34 581 aa11.96□□□□□ -0.49
TRAF3IP2-208ENST00000392556 DIS3L2Q8IYB7 885 aaKnown RBP11.96□□□□□ -0.49
TRAF3IP2-208ENST00000392556 COLGALT2Q8IYK4 626 aa11.96□□□□□ -0.49
TRAF3IP2-208ENST00000392556 SMG8Q8ND04 991 aaKnown RBP11.96□□□□□ -0.49
TRAF3IP2-208ENST00000392556 STAMQ92783 540 aa11.96□□□□□ -0.49
TRAF3IP2-208ENST00000392556 DHTKD1Q96HY7 919 aaPredicted RBP11.96□□□□□ -0.49
TRAF3IP2-208ENST00000392556 DHRS1Q96LJ7 313 aa11.96□□□□□ -0.49
TRAF3IP2-208ENST00000392556 MTMR9Q96QG7 549 aa11.96□□□□□ -0.49
TRAF3IP2-208ENST00000392556 C2orf40Q9H1Z8 148 aa11.96□□□□□ -0.49
TRAF3IP2-208ENST00000392556 DPH5Q9H2P9 285 aa11.96□□□□□ -0.49
TRAF3IP2-208ENST00000392556 PRMT7Q9NVM4 692 aaPredicted RBP11.96□□□□□ -0.49
TRAF3IP2-208ENST00000392556 DDX43Q9NXZ2 648 aaKnown RBP11.96□□□□□ -0.49
TRAF3IP2-208ENST00000392556 TUBA8Q9NY65 449 aaPredicted RBP11.96□□□□□ -0.49
TRAF3IP2-208ENST00000392556 A0A0J9YVX5 310 aa11.96□□□□□ -0.5
TRAF3IP2-208ENST00000392556 ATP9BO43861 1147 aa11.96□□□□□ -0.5
TRAF3IP2-208ENST00000392556 NUDT17P0C025 328 aa11.96□□□□□ -0.5
TRAF3IP2-208ENST00000392556 EPCAMP16422 314 aa11.96□□□□□ -0.5
TRAF3IP2-208ENST00000392556 TOB1P50616 345 aaPredicted RBP11.96□□□□□ -0.5
TRAF3IP2-208ENST00000392556 HPCAP84074 193 aa11.96□□□□□ -0.5
TRAF3IP2-208ENST00000392556 MBTD1Q05BQ5 628 aa11.96□□□□□ -0.5
TRAF3IP2-208ENST00000392556 NR5A1Q13285 461 aa11.96□□□□□ -0.5
TRAF3IP2-208ENST00000392556 FAM187BQ17R55 369 aa11.96□□□□□ -0.5
TRAF3IP2-208ENST00000392556 TMEM259Q4ZIN3 620 aa11.96□□□□□ -0.5
TRAF3IP2-208ENST00000392556 LIN52Q52LA3 116 aa11.96□□□□□ -0.5
TRAF3IP2-208ENST00000392556 SLC27A1Q6PCB7 646 aa11.96□□□□□ -0.5
TRAF3IP2-208ENST00000392556 FITM2Q8N6M3 262 aa11.96□□□□□ -0.5
TRAF3IP2-208ENST00000392556 FAM13CQ8NE31 585 aa11.96□□□□□ -0.5
TRAF3IP2-208ENST00000392556 PRSS33Q8NF86 280 aa11.96□□□□□ -0.5
TRAF3IP2-208ENST00000392556 BCL7CQ8WUZ0 217 aaPredicted RBP11.96□□□□□ -0.5
TRAF3IP2-208ENST00000392556 NELFBQ8WX92 580 aa11.96□□□□□ -0.5
TRAF3IP2-208ENST00000392556 NXPE3Q969Y0 559 aa11.96□□□□□ -0.5
TRAF3IP2-208ENST00000392556 NACC1Q96RE7 527 aa11.96□□□□□ -0.5
TRAF3IP2-208ENST00000392556 PSMB7Q99436 277 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms