RNA–Protein interactions for RNA: ENST00000392351.7

HOMER3-202, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,557 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-202ENST00000392351 USP3Q9Y6I4 520 aa26.74■■□□□ 1.87
HOMER3-202ENST00000392351 FAM170AA1A519 330 aa26.73■■□□□ 1.87
HOMER3-202ENST00000392351 FAM92AA1XBS5 289 aa26.73■■□□□ 1.87
HOMER3-202ENST00000392351 TADA3O75528 432 aa26.73■■□□□ 1.87
HOMER3-202ENST00000392351 GABBR2O75899 941 aa26.73■■□□□ 1.87
HOMER3-202ENST00000392351 F11P03951 625 aa26.73■■□□□ 1.87
HOMER3-202ENST00000392351 IL9P15248 144 aa26.73■■□□□ 1.87
HOMER3-202ENST00000392351 TSR1Q2NL82 804 aaKnown RBP26.73■■□□□ 1.87
HOMER3-202ENST00000392351 ZNF571Q7Z3V5 609 aaPredicted RBP26.73■■□□□ 1.87
HOMER3-202ENST00000392351 SYT11Q9BT88 431 aa26.73■■□□□ 1.87
HOMER3-202ENST00000392351 SCML2Q9UQR0 700 aa26.73■■□□□ 1.87
HOMER3-202ENST00000392351 BZW2Q9Y6E2 419 aaKnown RBP26.73■■□□□ 1.87
HOMER3-202ENST00000392351 MOSPD3O75425 235 aa26.72■■□□□ 1.87
HOMER3-202ENST00000392351 SERPING1P05155 500 aa26.72■■□□□ 1.87
HOMER3-202ENST00000392351 USP17L7P0C7H9 530 aa26.72■■□□□ 1.87
HOMER3-202ENST00000392351 CEBPBP17676 345 aa26.72■■□□□ 1.87
HOMER3-202ENST00000392351 HNRNPH3P31942 346 aaKnown RBP26.72■■□□□ 1.87
HOMER3-202ENST00000392351 NOMO3P69849 1222 aa26.72■■□□□ 1.87
HOMER3-202ENST00000392351 ARID5BQ14865 1188 aa26.72■■□□□ 1.87
HOMER3-202ENST00000392351 NAA35Q5VZE5 725 aa26.72■■□□□ 1.87
HOMER3-202ENST00000392351 TRIM72Q6ZMU5 477 aa26.72■■□□□ 1.87
HOMER3-202ENST00000392351 ARHGAP30Q7Z6I6 1101 aaPredicted RBP26.72■■□□□ 1.87
HOMER3-202ENST00000392351 CPXM1Q96SM3 734 aa26.72■■□□□ 1.87
HOMER3-202ENST00000392351 PCDHB18PQ96TA0 734 aa26.72■■□□□ 1.87
HOMER3-202ENST00000392351 SLC4A5Q9BY07 1137 aa26.72■■□□□ 1.87
HOMER3-202ENST00000392351 ULBP1Q9BZM6 244 aa26.72■■□□□ 1.87
HOMER3-202ENST00000392351 GMIPQ9P107 970 aa26.72■■□□□ 1.87
HOMER3-202ENST00000392351 E5RJQ4 531 aa26.71■■□□□ 1.87
HOMER3-202ENST00000392351 ZBED1O96006 694 aa26.71■■□□□ 1.87
HOMER3-202ENST00000392351 CYP1A1P04798 512 aaPredicted RBP26.71■■□□□ 1.87
HOMER3-202ENST00000392351 TNFAIP3P21580 790 aa26.71■■□□□ 1.87
HOMER3-202ENST00000392351 ACADSBP45954 432 aa26.71■■□□□ 1.87
HOMER3-202ENST00000392351 RPL34P49207 117 aaKnown RBP26.71■■□□□ 1.87
HOMER3-202ENST00000392351 MRPS5P82675 430 aaKnown RBP26.71■■□□□ 1.87
HOMER3-202ENST00000392351 CYP4F8P98187 520 aa26.71■■□□□ 1.87
HOMER3-202ENST00000392351 TEAD2Q15562 447 aa26.71■■□□□ 1.87
HOMER3-202ENST00000392351 CCDC186Q7Z3E2 898 aa26.71■■□□□ 1.87
HOMER3-202ENST00000392351 SPC24Q8NBT2 197 aa26.71■■□□□ 1.87
HOMER3-202ENST00000392351 PDZD8Q8NEN9 1154 aa26.71■■□□□ 1.87
HOMER3-202ENST00000392351 ATXN2LQ8WWM7 1075 aaKnown RBP26.71■■□□□ 1.87
HOMER3-202ENST00000392351 CPA5Q8WXQ8 436 aa26.71■■□□□ 1.87
HOMER3-202ENST00000392351 PPP1R13BQ96KQ4 1090 aa26.71■■□□□ 1.87
HOMER3-202ENST00000392351 ZNHIT6Q9NWK9 470 aaKnown RBP26.71■■□□□ 1.87
HOMER3-202ENST00000392351 TRPM5Q9NZQ8 1165 aa26.71■■□□□ 1.87
HOMER3-202ENST00000392351 CHORDC1Q9UHD1 332 aaPredicted RBP26.71■■□□□ 1.87
HOMER3-202ENST00000392351 PLEKP08567 350 aaPredicted RBP26.71■■□□□ 1.87
HOMER3-202ENST00000392351 SP100P23497 879 aaPredicted RBP26.71■■□□□ 1.87
HOMER3-202ENST00000392351 MRE11P49959 708 aa26.71■■□□□ 1.87
HOMER3-202ENST00000392351 GSE1Q14687 1217 aa26.71■■□□□ 1.87
HOMER3-202ENST00000392351 PTPN20Q4JDL3 420 aa26.71■■□□□ 1.87
HOMER3-202ENST00000392351 TC2NQ8N9U0 490 aa26.71■■□□□ 1.87
HOMER3-202ENST00000392351 OLIG1Q8TAK6 271 aa26.71■■□□□ 1.87
HOMER3-202ENST00000392351 OVCA2Q8WZ82 227 aa26.71■■□□□ 1.87
HOMER3-202ENST00000392351 PHF7Q9BWX1 381 aaPredicted RBP26.71■■□□□ 1.87
HOMER3-202ENST00000392351 CYLDQ9NQC7 956 aa26.71■■□□□ 1.87
HOMER3-202ENST00000392351 CNGB3Q9NQW8 809 aa26.71■■□□□ 1.87
HOMER3-202ENST00000392351 TJP2Q9UDY2 1190 aa26.71■■□□□ 1.87
HOMER3-202ENST00000392351 TCF20Q9UGU0 1960 aaKnown RBP26.7■■□□□ 1.86
HOMER3-202ENST00000392351 ABL1P00519 1130 aa26.7■■□□□ 1.86
HOMER3-202ENST00000392351 PPP3CCP48454 512 aa26.7■■□□□ 1.86
HOMER3-202ENST00000392351 CLEC16AQ2KHT3 1053 aa26.7■■□□□ 1.86
HOMER3-202ENST00000392351 STXBP5Q5T5C0 1151 aa26.7■■□□□ 1.86
HOMER3-202ENST00000392351 WDR59Q6PJI9 974 aa26.7■■□□□ 1.86
HOMER3-202ENST00000392351 TMEM110Q86TL2 294 aa26.7■■□□□ 1.86
HOMER3-202ENST00000392351 NPAS3Q8IXF0 933 aa26.7■■□□□ 1.86
HOMER3-202ENST00000392351 MRPS31Q92665 395 aaKnown RBP26.7■■□□□ 1.86
HOMER3-202ENST00000392351 FGF13Q92913 245 aa26.7■■□□□ 1.86
HOMER3-202ENST00000392351 MIS12Q9H081 205 aa26.7■■□□□ 1.86
HOMER3-202ENST00000392351 SLITRK6Q9H5Y7 841 aa26.7■■□□□ 1.86
HOMER3-202ENST00000392351 SYNCQ9H7C4 482 aa26.7■■□□□ 1.86
HOMER3-202ENST00000392351 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP26.7■■□□□ 1.868e-6■■□□□ 11.6
HOMER3-202ENST00000392351 UNGP13051 313 aaPredicted RBP26.69■■□□□ 1.86
HOMER3-202ENST00000392351 GBP2P32456 591 aaPredicted RBP26.69■■□□□ 1.86
HOMER3-202ENST00000392351 ARHGAP15Q53QZ3 475 aa26.69■■□□□ 1.86
HOMER3-202ENST00000392351 PM20D1Q6GTS8 502 aa26.69■■□□□ 1.86
HOMER3-202ENST00000392351 SCUBE3Q8IX30 993 aa26.69■■□□□ 1.86
HOMER3-202ENST00000392351 IPO4Q8TEX9 1081 aaKnown RBP26.69■■□□□ 1.86
HOMER3-202ENST00000392351 NDRG1Q92597 394 aaKnown RBP26.69■■□□□ 1.86
HOMER3-202ENST00000392351 TLR8Q9NR97 1041 aaKnown RBP26.69■■□□□ 1.86
HOMER3-202ENST00000392351 ARHGAP20Q9P2F6 1191 aa26.69■■□□□ 1.86
HOMER3-202ENST00000392351 NCANO14594 1321 aa26.69■■□□□ 1.86
HOMER3-202ENST00000392351 ZNF840PA6NDX5 716 aa26.68■■□□□ 1.86
HOMER3-202ENST00000392351 FBXO21O94952 628 aa26.68■■□□□ 1.86
HOMER3-202ENST00000392351 PGFP49763 221 aa26.68■■□□□ 1.86
HOMER3-202ENST00000392351 GPR158Q5T848 1215 aa26.68■■□□□ 1.86
HOMER3-202ENST00000392351 ERICH1Q86X53 443 aa26.68■■□□□ 1.86
HOMER3-202ENST00000392351 SLC30A5Q8TAD4 765 aa26.68■■□□□ 1.86
HOMER3-202ENST00000392351 CLEC4CQ8WTT0 213 aa26.68■■□□□ 1.86
HOMER3-202ENST00000392351 MYADMQ96S97 322 aa26.68■■□□□ 1.86
HOMER3-202ENST00000392351 CDH7Q9ULB5 785 aa26.68■■□□□ 1.86
HOMER3-202ENST00000392351 NUP210Q8TEM1 1887 aaPredicted RBP26.68■■□□□ 1.86
HOMER3-202ENST00000392351 ERBB2P04626 1255 aa26.67■■□□□ 1.86
HOMER3-202ENST00000392351 ZDHHC11BP0C7U3 371 aa26.67■■□□□ 1.86
HOMER3-202ENST00000392351 NSFP46459 744 aaKnown RBP26.67■■□□□ 1.86
HOMER3-202ENST00000392351 SNX16P57768 344 aa26.67■■□□□ 1.86
HOMER3-202ENST00000392351 DAOAP59103 153 aa26.67■■□□□ 1.86
HOMER3-202ENST00000392351 CENPCQ03188 943 aa26.67■■□□□ 1.86
HOMER3-202ENST00000392351 TXNDC8Q6A555 127 aa26.67■■□□□ 1.86
HOMER3-202ENST00000392351 OTOP3Q7RTS5 596 aa26.67■■□□□ 1.86
HOMER3-202ENST00000392351 VPS36Q86VN1 386 aa26.67■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms