RNA–Protein interactions for RNA: ENST00000390462.1

TRAV35-201, Transcript of T cell receptor alpha variable 35, humanhuman

BASIC

Gene TRAV35, Length 330 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV35-201ENST00000390462 UNC5CO95185 931 aa6.94□□□□□ -1.3
TRAV35-201ENST00000390462 LY86O95711 162 aa6.94□□□□□ -1.3
TRAV35-201ENST00000390462 HLA-DPA1P20036 260 aa6.94□□□□□ -1.3
TRAV35-201ENST00000390462 MST1P26927 711 aa6.94□□□□□ -1.3
TRAV35-201ENST00000390462 THBS2P35442 1172 aa6.94□□□□□ -1.3
TRAV35-201ENST00000390462 KRT2P35908 639 aa6.94□□□□□ -1.3
TRAV35-201ENST00000390462 UCP3P55916 312 aa6.94□□□□□ -1.3
TRAV35-201ENST00000390462 MXRA7P84157 204 aa6.94□□□□□ -1.3
TRAV35-201ENST00000390462 PTP4A2Q12974 167 aa6.94□□□□□ -1.3
TRAV35-201ENST00000390462 C19orf54Q5BKX5 351 aa6.94□□□□□ -1.3
TRAV35-201ENST00000390462 PLEKHS1Q5SXH7 462 aa6.94□□□□□ -1.3
TRAV35-201ENST00000390462 ZDHHC24Q6UX98 284 aa6.94□□□□□ -1.3
TRAV35-201ENST00000390462 NUP54Q7Z3B4 507 aa6.94□□□□□ -1.3
TRAV35-201ENST00000390462 SLCO6A1Q86UG4 719 aa6.94□□□□□ -1.3
TRAV35-201ENST00000390462 VSIG10LQ86VR7 867 aa6.94□□□□□ -1.3
TRAV35-201ENST00000390462 DCP2Q8IU60 420 aaKnown RBP6.94□□□□□ -1.3
TRAV35-201ENST00000390462 KIAA2013Q8IYS2 634 aa6.94□□□□□ -1.3
TRAV35-201ENST00000390462 CCAR2Q8N163 923 aaKnown RBP6.94□□□□□ -1.3
TRAV35-201ENST00000390462 SVOPQ8N4V2 548 aa6.94□□□□□ -1.3
TRAV35-201ENST00000390462 AOPEPQ8N6M6 819 aa6.94□□□□□ -1.3
TRAV35-201ENST00000390462 UBE2FQ969M7 185 aa6.94□□□□□ -1.3
TRAV35-201ENST00000390462 ANP32EQ9BTT0 268 aa6.94□□□□□ -1.3
TRAV35-201ENST00000390462 ACAT2Q9BWD1 397 aa6.94□□□□□ -1.3
TRAV35-201ENST00000390462 CEP41Q9BYV8 373 aa6.94□□□□□ -1.3
TRAV35-201ENST00000390462 TRIM5Q9C035 493 aa6.94□□□□□ -1.3
TRAV35-201ENST00000390462 RANBP17Q9H2T7 1088 aaKnown RBP6.94□□□□□ -1.3
TRAV35-201ENST00000390462 VEZTQ9HBM0 779 aa6.94□□□□□ -1.3
TRAV35-201ENST00000390462 TMEM140Q9NV12 185 aa6.94□□□□□ -1.3
TRAV35-201ENST00000390462 ADPRHL2Q9NX46 363 aa6.94□□□□□ -1.3
TRAV35-201ENST00000390462 ZDHHC7Q9NXF8 308 aa6.94□□□□□ -1.3
TRAV35-201ENST00000390462 TAB2Q9NYJ8 693 aa6.94□□□□□ -1.3
TRAV35-201ENST00000390462 ARHGAP20Q9P2F6 1191 aa6.94□□□□□ -1.3
TRAV35-201ENST00000390462 PALD1Q9ULE6 856 aa6.94□□□□□ -1.3
TRAV35-201ENST00000390462 CORO1CQ9ULV4 474 aaPredicted RBP6.94□□□□□ -1.3
TRAV35-201ENST00000390462 SUPT6HQ7KZ85 1726 aaKnown RBP6.93□□□□□ -1.3
TRAV35-201ENST00000390462 A0A1W2PQ09 198 aa6.93□□□□□ -1.3
TRAV35-201ENST00000390462 NPIPB15A6NHN6 443 aaPredicted RBP6.93□□□□□ -1.3
TRAV35-201ENST00000390462 FAM90A20PA6NIJ5 464 aa6.93□□□□□ -1.3
TRAV35-201ENST00000390462 H3BS24 57 aa6.93□□□□□ -1.3
TRAV35-201ENST00000390462 GNB5O14775 395 aa6.93□□□□□ -1.3
TRAV35-201ENST00000390462 SGSM2O43147 1006 aa6.93□□□□□ -1.3
TRAV35-201ENST00000390462 GUCY1B2O75343 617 aa6.93□□□□□ -1.3
TRAV35-201ENST00000390462 METTL18O95568 372 aa6.93□□□□□ -1.3
TRAV35-201ENST00000390462 GNAI3P08754 354 aa6.93□□□□□ -1.3
TRAV35-201ENST00000390462 KRT10P13645 584 aa6.93□□□□□ -1.3
TRAV35-201ENST00000390462 ELNP15502 786 aa6.93□□□□□ -1.3
TRAV35-201ENST00000390462 TPH1P17752 444 aa6.93□□□□□ -1.3
TRAV35-201ENST00000390462 TACR1P25103 407 aa6.93□□□□□ -1.3
TRAV35-201ENST00000390462 MAP4P27816 1152 aaKnown RBP6.93□□□□□ -1.3
TRAV35-201ENST00000390462 CPT1AP50416 773 aa6.93□□□□□ -1.3
TRAV35-201ENST00000390462 WNT3AP56704 352 aa6.93□□□□□ -1.3
TRAV35-201ENST00000390462 PSMC6P62333 389 aa6.93□□□□□ -1.3
TRAV35-201ENST00000390462 GNAI1P63096 354 aa6.93□□□□□ -1.3
TRAV35-201ENST00000390462 SNRPNP63162 240 aaKnown RBP6.93□□□□□ -1.3
TRAV35-201ENST00000390462 TRIM28Q13263 835 aaKnown RBP6.93□□□□□ -1.3
TRAV35-201ENST00000390462 TRIM29Q14134 588 aa6.93□□□□□ -1.3
TRAV35-201ENST00000390462 SEMA3AQ14563 771 aa6.93□□□□□ -1.3
TRAV35-201ENST00000390462 SLMAPQ14BN4 828 aa6.93□□□□□ -1.3
TRAV35-201ENST00000390462 NRN1LQ496H8 165 aa6.93□□□□□ -1.3
TRAV35-201ENST00000390462 SLC2A7Q6PXP3 512 aa6.93□□□□□ -1.3
TRAV35-201ENST00000390462 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.93□□□□□ -1.3
TRAV35-201ENST00000390462 PIWIL3Q7Z3Z3 882 aaKnown RBP6.93□□□□□ -1.3
TRAV35-201ENST00000390462 ZNF804AQ7Z570 1209 aa6.93□□□□□ -1.3
TRAV35-201ENST00000390462 SCN4BQ8IWT1 228 aa6.93□□□□□ -1.3
TRAV35-201ENST00000390462 CCDC105Q8IYK2 499 aa6.93□□□□□ -1.3
TRAV35-201ENST00000390462 WDTC1Q8N5D0 677 aa6.93□□□□□ -1.3
TRAV35-201ENST00000390462 OTUD6BQ8N6M0 293 aa6.93□□□□□ -1.3
TRAV35-201ENST00000390462 UTP15Q8TED0 518 aaKnown RBP6.93□□□□□ -1.3
TRAV35-201ENST00000390462 FNIP1Q8TF40 1166 aa6.93□□□□□ -1.3
TRAV35-201ENST00000390462 DEPDC1BQ8WUY9 529 aa6.93□□□□□ -1.3
TRAV35-201ENST00000390462 ZNF480Q8WV37 535 aa6.93□□□□□ -1.3
TRAV35-201ENST00000390462 NCSTNQ92542 709 aa6.93□□□□□ -1.3
TRAV35-201ENST00000390462 PTP4A1Q93096 173 aa6.93□□□□□ -1.3
TRAV35-201ENST00000390462 VPS33AQ96AX1 596 aa6.93□□□□□ -1.3
TRAV35-201ENST00000390462 MED15Q96RN5 788 aa6.93□□□□□ -1.3
TRAV35-201ENST00000390462 PHF7Q9BWX1 381 aaPredicted RBP6.93□□□□□ -1.3
TRAV35-201ENST00000390462 MAK16Q9BXY0 300 aaKnown RBP6.93□□□□□ -1.3
TRAV35-201ENST00000390462 MS4A7Q9GZW8 240 aaPredicted RBP6.93□□□□□ -1.3
TRAV35-201ENST00000390462 AP5M1Q9H0R1 490 aa6.93□□□□□ -1.3
TRAV35-201ENST00000390462 SMARCAD1Q9H4L7 1026 aa6.93□□□□□ -1.3
TRAV35-201ENST00000390462 COPS7BQ9H9Q2 264 aaPredicted RBP6.93□□□□□ -1.3
TRAV35-201ENST00000390462 SLC39A2Q9NP94 309 aa6.93□□□□□ -1.3
TRAV35-201ENST00000390462 SLC35C2Q9NQQ7 365 aa6.93□□□□□ -1.3
TRAV35-201ENST00000390462 CNTN6Q9UQ52 1028 aa6.93□□□□□ -1.3
TRAV35-201ENST00000390462 PLEKHM1Q9Y4G2 1056 aa6.93□□□□□ -1.3
TRAV35-201ENST00000390462 KDM3AQ9Y4C1 1321 aa6.93□□□□□ -1.3
TRAV35-201ENST00000390462 GOLGA3Q08378 1498 aa6.92□□□□□ -1.3
TRAV35-201ENST00000390462 RAPGEF2Q9Y4G8 1499 aa6.92□□□□□ -1.3
TRAV35-201ENST00000390462 LOC102723971A0A1B0GUV8 181 aa6.92□□□□□ -1.3
TRAV35-201ENST00000390462 A8MV72 311 aaPredicted RBP6.92□□□□□ -1.3
TRAV35-201ENST00000390462 F8W031 263 aaPredicted RBP6.92□□□□□ -1.3
TRAV35-201ENST00000390462 FAM229AH3BQW9 127 aa6.92□□□□□ -1.3
TRAV35-201ENST00000390462 DDX39AO00148 427 aaKnown RBP6.92□□□□□ -1.3
TRAV35-201ENST00000390462 DNAJB5O75953 348 aa6.92□□□□□ -1.3
TRAV35-201ENST00000390462 ALX3O95076 343 aa6.92□□□□□ -1.3
TRAV35-201ENST00000390462 GUCA1CO95843 209 aa6.92□□□□□ -1.3
TRAV35-201ENST00000390462 GRPP07492 148 aa6.92□□□□□ -1.3
TRAV35-201ENST00000390462 PCSK1P29120 753 aa6.92□□□□□ -1.3
TRAV35-201ENST00000390462 TLX1P31314 330 aaPredicted RBP6.92□□□□□ -1.3
TRAV35-201ENST00000390462 SLC5A2P31639 672 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms