RNA–Protein interactions for RNA: ENST00000390399.3

TRBV27-201, Transcript of T cell receptor beta variable 27, humanhuman

APPRIS P1 BASIC

Gene TRBV27, Length 387 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27-201ENST00000390399 ATP2A3Q93084 1043 aa9.46□□□□□ -0.9
TRBV27-201ENST00000390399 NT5C1BQ96P26 610 aa9.46□□□□□ -0.9
TRBV27-201ENST00000390399 GBP4Q96PP9 640 aa9.46□□□□□ -0.9
TRBV27-201ENST00000390399 IER2Q9BTL4 223 aa9.46□□□□□ -0.9
TRBV27-201ENST00000390399 DUSP16Q9BY84 665 aa9.46□□□□□ -0.9
TRBV27-201ENST00000390399 NACA2Q9H009 215 aa9.46□□□□□ -0.9
TRBV27-201ENST00000390399 RNF38Q9H0F5 515 aa9.46□□□□□ -0.9
TRBV27-201ENST00000390399 CHRDQ9H2X0 955 aa9.46□□□□□ -0.9
TRBV27-201ENST00000390399 LMAN1LQ9HAT1 526 aa9.46□□□□□ -0.9
TRBV27-201ENST00000390399 PNPLA8Q9NP80 782 aa9.46□□□□□ -0.9
TRBV27-201ENST00000390399 SMPD4Q9NXE4 827 aa9.46□□□□□ -0.9
TRBV27-201ENST00000390399 IL37Q9NZH6 218 aa9.46□□□□□ -0.9
TRBV27-201ENST00000390399 CHORDC1Q9UHD1 332 aaPredicted RBP9.46□□□□□ -0.9
TRBV27-201ENST00000390399 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.46□□□□□ -0.9
TRBV27-201ENST00000390399 MUC6Q6W4X9 2439 aa9.46□□□□□ -0.9
TRBV27-201ENST00000390399 OTOL1A6NHN0 477 aaPredicted RBP9.45□□□□□ -0.9
TRBV27-201ENST00000390399 HHLA1C9JL84 531 aa9.45□□□□□ -0.9
TRBV27-201ENST00000390399 CYP26A1O43174 497 aa9.45□□□□□ -0.9
TRBV27-201ENST00000390399 COCHO43405 550 aa9.45□□□□□ -0.9
TRBV27-201ENST00000390399 AFPP02771 609 aaKnown RBP9.45□□□□□ -0.9
TRBV27-201ENST00000390399 ZDHHC11BP0C7U3 371 aa9.45□□□□□ -0.9
TRBV27-201ENST00000390399 SP9P0CG40 484 aa9.45□□□□□ -0.9
TRBV27-201ENST00000390399 CHRNB1P11230 501 aa9.45□□□□□ -0.9
TRBV27-201ENST00000390399 CD19P15391 556 aa9.45□□□□□ -0.9
TRBV27-201ENST00000390399 ACO1P21399 889 aaKnown RBP9.45□□□□□ -0.9
TRBV27-201ENST00000390399 NBL1P41271 181 aa9.45□□□□□ -0.9
TRBV27-201ENST00000390399 TUBP50607 506 aa9.45□□□□□ -0.9
TRBV27-201ENST00000390399 ZXDBP98169 803 aa9.45□□□□□ -0.9
TRBV27-201ENST00000390399 AMPD2Q01433 879 aa9.45□□□□□ -0.9
TRBV27-201ENST00000390399 KCNH2Q12809 1159 aa9.45□□□□□ -0.9
TRBV27-201ENST00000390399 MTAPQ13126 283 aa9.45□□□□□ -0.9
TRBV27-201ENST00000390399 GOLGA7BQ2TAP0 167 aa9.45□□□□□ -0.9
TRBV27-201ENST00000390399 EML3Q32P44 896 aa9.45□□□□□ -0.9
TRBV27-201ENST00000390399 DGKKQ5KSL6 1271 aa9.45□□□□□ -0.9
TRBV27-201ENST00000390399 SNX30Q5VWJ9 437 aa9.45□□□□□ -0.9
TRBV27-201ENST00000390399 ARHGAP17Q68EM7 881 aa9.45□□□□□ -0.9
TRBV27-201ENST00000390399 MAML2Q8IZL2 1156 aaPredicted RBP9.45□□□□□ -0.9
TRBV27-201ENST00000390399 PPM1KQ8N3J5 372 aa9.45□□□□□ -0.9
TRBV27-201ENST00000390399 CNOT6LQ96LI5 555 aaKnown RBP9.45□□□□□ -0.9
TRBV27-201ENST00000390399 CCSER2Q9H7U1 834 aa9.45□□□□□ -0.9
TRBV27-201ENST00000390399 TLR8Q9NR97 1041 aaKnown RBP9.45□□□□□ -0.9
TRBV27-201ENST00000390399 RBM12Q9NTZ6 932 aaKnown RBP9.45□□□□□ -0.9
TRBV27-201ENST00000390399 LMBRD1Q9NUN5 540 aa9.45□□□□□ -0.9
TRBV27-201ENST00000390399 CFAP97Q9P2B7 532 aa9.45□□□□□ -0.9
TRBV27-201ENST00000390399 FBXO4Q9UKT5 387 aa9.45□□□□□ -0.9
TRBV27-201ENST00000390399 SCML2Q9UQR0 700 aa9.45□□□□□ -0.9
TRBV27-201ENST00000390399 MYH10P35580 1976 aa9.44□□□□□ -0.9
TRBV27-201ENST00000390399 PROB1E7EW31 1015 aa9.44□□□□□ -0.9
TRBV27-201ENST00000390399 SCAMP3O14828 347 aaKnown RBP9.44□□□□□ -0.9
TRBV27-201ENST00000390399 TLR5O60602 858 aa9.44□□□□□ -0.9
TRBV27-201ENST00000390399 NFATC1O95644 943 aa9.44□□□□□ -0.9
TRBV27-201ENST00000390399 PGFP49763 221 aa9.44□□□□□ -0.9
TRBV27-201ENST00000390399 KIF11P52732 1056 aa9.44□□□□□ -0.9
TRBV27-201ENST00000390399 SLC8A3P57103 927 aa9.44□□□□□ -0.9
TRBV27-201ENST00000390399 CSTF1Q05048 431 aaKnown RBP9.44□□□□□ -0.9
TRBV27-201ENST00000390399 GRSF1Q12849 480 aaKnown RBP eCLIP9.44□□□□□ -0.9
TRBV27-201ENST00000390399 TPD52L1Q16890 204 aaPredicted RBP9.44□□□□□ -0.9
TRBV27-201ENST00000390399 DPCR1Q3MIW9 517 aa9.44□□□□□ -0.9
TRBV27-201ENST00000390399 SGO2Q562F6 1265 aa9.44□□□□□ -0.9
TRBV27-201ENST00000390399 ZC3H14Q6PJT7 736 aaKnown RBP9.44□□□□□ -0.9
TRBV27-201ENST00000390399 CREBRFQ8IUR6 639 aa9.44□□□□□ -0.9
TRBV27-201ENST00000390399 ARHGEF19Q8IW93 802 aa9.44□□□□□ -0.9
TRBV27-201ENST00000390399 UBR7Q8N806 425 aa9.44□□□□□ -0.9
TRBV27-201ENST00000390399 KIAA1958Q8N8K9 716 aa9.44□□□□□ -0.9
TRBV27-201ENST00000390399 LMO3Q8TAP4 145 aa9.44□□□□□ -0.9
TRBV27-201ENST00000390399 KAT5Q92993 513 aa9.44□□□□□ -0.9
TRBV27-201ENST00000390399 EXOC4Q96A65 974 aa9.44□□□□□ -0.9
TRBV27-201ENST00000390399 IPO9Q96P70 1041 aaKnown RBP9.44□□□□□ -0.9
TRBV27-201ENST00000390399 MED15Q96RN5 788 aa9.44□□□□□ -0.9
TRBV27-201ENST00000390399 INTS2Q9H0H0 1204 aaKnown RBP9.44□□□□□ -0.9
TRBV27-201ENST00000390399 ECT2Q9H8V3 914 aa9.44□□□□□ -0.9
TRBV27-201ENST00000390399 PRMT8Q9NR22 394 aaPredicted RBP9.44□□□□□ -0.9
TRBV27-201ENST00000390399 HESX1Q9UBX0 185 aa9.44□□□□□ -0.9
TRBV27-201ENST00000390399 DACH1Q9UI36 760 aa9.44□□□□□ -0.9
TRBV27-201ENST00000390399 PCDHB4Q9Y5E5 795 aa9.44□□□□□ -0.9
TRBV27-201ENST00000390399 A0A1W2PQH9 124 aa9.43□□□□□ -0.9
TRBV27-201ENST00000390399 E2F8A0AVK6 867 aa9.43□□□□□ -0.9
TRBV27-201ENST00000390399 GOLGA6L22H0YM25 854 aa9.43□□□□□ -0.9
TRBV27-201ENST00000390399 SLC9A3R1O14745 358 aaPredicted RBP9.43□□□□□ -0.9
TRBV27-201ENST00000390399 GFRA3O60609 400 aa9.43□□□□□ -0.9
TRBV27-201ENST00000390399 PAEPP09466 180 aa9.43□□□□□ -0.9
TRBV27-201ENST00000390399 IRF1P10914 325 aa9.43□□□□□ -0.9
TRBV27-201ENST00000390399 VDRP11473 427 aa9.43□□□□□ -0.9
TRBV27-201ENST00000390399 GJA4P35212 333 aa9.43□□□□□ -0.9
TRBV27-201ENST00000390399 MTIF2P46199 727 aaKnown RBP9.43□□□□□ -0.9
TRBV27-201ENST00000390399 CCR3P51677 355 aa9.43□□□□□ -0.9
TRBV27-201ENST00000390399 BCAT1P54687 386 aa9.43□□□□□ -0.9
TRBV27-201ENST00000390399 GCNT1Q02742 428 aa9.43□□□□□ -0.9
TRBV27-201ENST00000390399 BST2Q10589 180 aaKnown RBP9.43□□□□□ -0.9
TRBV27-201ENST00000390399 NR1H3Q13133 447 aa9.43□□□□□ -0.9
TRBV27-201ENST00000390399 CCINQ13939 588 aa9.43□□□□□ -0.9
TRBV27-201ENST00000390399 PPP2R5DQ14738 602 aa9.43□□□□□ -0.9
TRBV27-201ENST00000390399 ZNF528Q3MIS6 628 aa9.43□□□□□ -0.9
TRBV27-201ENST00000390399 TMEM196Q5HYL7 178 aa9.43□□□□□ -0.9
TRBV27-201ENST00000390399 FSTL4Q6MZW2 842 aa9.43□□□□□ -0.9
TRBV27-201ENST00000390399 TMEM270Q6UE05 265 aa9.43□□□□□ -0.9
TRBV27-201ENST00000390399 Q6ZS52 159 aa9.43□□□□□ -0.9
TRBV27-201ENST00000390399 RRAGAQ7L523 313 aa9.43□□□□□ -0.9
TRBV27-201ENST00000390399 CCDC186Q7Z3E2 898 aa9.43□□□□□ -0.9
TRBV27-201ENST00000390399 PIGZQ86VD9 579 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms