RNA–Protein interactions for RNA: ENST00000389805.8

SQSTM1-202, Transcript of sequestosome 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQSTM1, Length 2,986 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-202ENST00000389805 B4GALT5O43286 388 aa18.45■□□□□ 0.54
SQSTM1-202ENST00000389805 HNRNPRO43390 633 aaKnown RBP18.45■□□□□ 0.54
SQSTM1-202ENST00000389805 OR6B1O95007 311 aa18.45■□□□□ 0.54
SQSTM1-202ENST00000389805 IFNB1P01574 187 aa18.45■□□□□ 0.54
SQSTM1-202ENST00000389805 ABHD2P08910 425 aa18.45■□□□□ 0.54
SQSTM1-202ENST00000389805 MYL2P10916 166 aa18.45■□□□□ 0.54
SQSTM1-202ENST00000389805 EDNRBP24530 442 aa18.45■□□□□ 0.54
SQSTM1-202ENST00000389805 ARSEP51690 589 aa18.45■□□□□ 0.54
SQSTM1-202ENST00000389805 ARL4CP56559 192 aa18.45■□□□□ 0.54
SQSTM1-202ENST00000389805 USP46P62068 366 aa18.45■□□□□ 0.54
SQSTM1-202ENST00000389805 PABPC1LQ4VXU2 614 aaKnown RBP18.45■□□□□ 0.54
SQSTM1-202ENST00000389805 RIPOR1Q6ZS17 1223 aa18.45■□□□□ 0.54
SQSTM1-202ENST00000389805 RHOT1Q8IXI2 618 aa18.45■□□□□ 0.54
SQSTM1-202ENST00000389805 BBOF1Q8ND07 529 aa18.45■□□□□ 0.54
SQSTM1-202ENST00000389805 TRIM11Q96F44 468 aa18.45■□□□□ 0.54
SQSTM1-202ENST00000389805 THTPAQ9BU02 230 aa18.45■□□□□ 0.54
SQSTM1-202ENST00000389805 KCNK13Q9HB14 408 aa18.45■□□□□ 0.54
SQSTM1-202ENST00000389805 DNAAF2Q9NVR5 837 aaKnown RBP18.45■□□□□ 0.54
SQSTM1-202ENST00000389805 DNPEPQ9ULA0 475 aa18.45■□□□□ 0.54
SQSTM1-202ENST00000389805 PPM1HQ9ULR3 514 aa18.45■□□□□ 0.54
SQSTM1-202ENST00000389805 ASS1P00966 412 aaKnown RBP18.45■□□□□ 0.54
SQSTM1-202ENST00000389805 KLRC2P26717 231 aa18.45■□□□□ 0.54
SQSTM1-202ENST00000389805 TFDP1Q14186 410 aa18.45■□□□□ 0.54
SQSTM1-202ENST00000389805 WDR78Q5VTH9 848 aa18.45■□□□□ 0.54
SQSTM1-202ENST00000389805 PHF13Q86YI8 300 aaPredicted RBP18.45■□□□□ 0.54
SQSTM1-202ENST00000389805 BRSK2Q8IWQ3 736 aa18.45■□□□□ 0.54
SQSTM1-202ENST00000389805 FEZF2Q8TBJ5 459 aa18.45■□□□□ 0.54
SQSTM1-202ENST00000389805 DTNBP1Q96EV8 351 aa18.45■□□□□ 0.54
SQSTM1-202ENST00000389805 DNAJC1Q96KC8 554 aaKnown RBP18.45■□□□□ 0.54
SQSTM1-202ENST00000389805 NLRP4Q96MN2 994 aa18.45■□□□□ 0.54
SQSTM1-202ENST00000389805 NR1H4Q96RI1 486 aaPredicted RBP18.45■□□□□ 0.54
SQSTM1-202ENST00000389805 PPP1R16BQ96T49 567 aa18.45■□□□□ 0.54
SQSTM1-202ENST00000389805 CENPKQ9BS16 269 aa18.45■□□□□ 0.54
SQSTM1-202ENST00000389805 PSMC3IPQ9P2W1 217 aaPredicted RBP18.45■□□□□ 0.54
SQSTM1-202ENST00000389805 ANGPTL2Q9UKU9 493 aa18.45■□□□□ 0.54
SQSTM1-202ENST00000389805 PHF24Q9UPV7 400 aa18.45■□□□□ 0.54
SQSTM1-202ENST00000389805 ZBTB42B2RXF5 422 aa18.44■□□□□ 0.54
SQSTM1-202ENST00000389805 TOM1L1O75674 476 aa18.44■□□□□ 0.54
SQSTM1-202ENST00000389805 RARBP10826 455 aa18.44■□□□□ 0.54
SQSTM1-202ENST00000389805 CDK16Q00536 496 aa18.44■□□□□ 0.54
SQSTM1-202ENST00000389805 OGDHQ02218 1023 aa18.44■□□□□ 0.54
SQSTM1-202ENST00000389805 CDC16Q13042 620 aa18.44■□□□□ 0.54
SQSTM1-202ENST00000389805 ORC1Q13415 861 aa18.44■□□□□ 0.54
SQSTM1-202ENST00000389805 GSTA3Q16772 222 aa18.44■□□□□ 0.54
SQSTM1-202ENST00000389805 CYP4A22Q5TCH4 519 aa18.44■□□□□ 0.54
SQSTM1-202ENST00000389805 METTL7BQ6UX53 244 aa18.44■□□□□ 0.54
SQSTM1-202ENST00000389805 SESTD1Q86VW0 696 aa18.44■□□□□ 0.54
SQSTM1-202ENST00000389805 TMEM192Q8IY95 271 aa18.44■□□□□ 0.54
SQSTM1-202ENST00000389805 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.44■□□□□ 0.54
SQSTM1-202ENST00000389805 TFAP2BQ92481 460 aa18.44■□□□□ 0.54
SQSTM1-202ENST00000389805 TTC25Q96NG3 672 aa18.44■□□□□ 0.54
SQSTM1-202ENST00000389805 ACO2Q99798 780 aaKnown RBP18.44■□□□□ 0.54
SQSTM1-202ENST00000389805 IMPG2Q9BZV3 1241 aa18.44■□□□□ 0.54
SQSTM1-202ENST00000389805 MRPL47Q9HD33 250 aaKnown RBP18.44■□□□□ 0.54
SQSTM1-202ENST00000389805 CISHQ9NSE2 258 aa18.44■□□□□ 0.54
SQSTM1-202ENST00000389805 CLIC5Q9NZA1 410 aa18.44■□□□□ 0.54
SQSTM1-202ENST00000389805 ATF7P17544 494 aaPredicted RBP18.44■□□□□ 0.54
SQSTM1-202ENST00000389805 BGNP21810 368 aa18.44■□□□□ 0.54
SQSTM1-202ENST00000389805 TBXAS1P24557 533 aaPredicted RBP18.44■□□□□ 0.54
SQSTM1-202ENST00000389805 ABCD1P33897 745 aa18.44■□□□□ 0.54
SQSTM1-202ENST00000389805 CDK7P50613 346 aa18.44■□□□□ 0.54
SQSTM1-202ENST00000389805 ZNF252P-AS1Q0IIN9 211 aa18.44■□□□□ 0.54
SQSTM1-202ENST00000389805 CCNG2Q16589 344 aa18.44■□□□□ 0.54
SQSTM1-202ENST00000389805 FAM160B1Q5W0V3 765 aa18.44■□□□□ 0.54
SQSTM1-202ENST00000389805 RAPH1Q70E73 1250 aa18.44■□□□□ 0.54
SQSTM1-202ENST00000389805 ZNF276Q8N554 614 aa18.44■□□□□ 0.54
SQSTM1-202ENST00000389805 SKA1Q96BD8 255 aa18.44■□□□□ 0.54
SQSTM1-202ENST00000389805 MCEEQ96PE7 176 aa18.44■□□□□ 0.54
SQSTM1-202ENST00000389805 PANX3Q96QZ0 392 aa18.44■□□□□ 0.54
SQSTM1-202ENST00000389805 NDE1Q9NXR1 346 aa18.44■□□□□ 0.54
SQSTM1-202ENST00000389805 CNTN6Q9UQ52 1028 aa18.44■□□□□ 0.54
SQSTM1-202ENST00000389805 IVNS1ABPQ9Y6Y0 642 aa18.44■□□□□ 0.54
SQSTM1-202ENST00000389805 SOCS7O14512 581 aa18.43■□□□□ 0.54
SQSTM1-202ENST00000389805 MMP8P22894 467 aa18.43■□□□□ 0.54
SQSTM1-202ENST00000389805 RASA2Q15283 850 aa18.43■□□□□ 0.54
SQSTM1-202ENST00000389805 FBXO16Q8IX29 292 aaPredicted RBP18.43■□□□□ 0.54
SQSTM1-202ENST00000389805 GPC2Q8N158 579 aa18.43■□□□□ 0.54
SQSTM1-202ENST00000389805 ARHGAP18Q8N392 663 aa18.43■□□□□ 0.54
SQSTM1-202ENST00000389805 WDTC1Q8N5D0 677 aa18.43■□□□□ 0.54
SQSTM1-202ENST00000389805 HIC2Q96JB3 615 aa18.43■□□□□ 0.54
SQSTM1-202ENST00000389805 MRPL4Q9BYD3 311 aaKnown RBP18.43■□□□□ 0.54
SQSTM1-202ENST00000389805 SENP1Q9P0U3 644 aa18.43■□□□□ 0.54
SQSTM1-202ENST00000389805 NXF1Q9UBU9 619 aaKnown RBP18.43■□□□□ 0.54
SQSTM1-202ENST00000389805 TJP2Q9UDY2 1190 aa18.43■□□□□ 0.54
SQSTM1-202ENST00000389805 CSADQ9Y600 493 aa18.43■□□□□ 0.54
SQSTM1-202ENST00000389805 STK10O94804 968 aaKnown RBP18.43■□□□□ 0.54
SQSTM1-202ENST00000389805 PRKCBP05771 671 aa18.43■□□□□ 0.54
SQSTM1-202ENST00000389805 SPDYAQ5MJ70 313 aa18.43■□□□□ 0.54
SQSTM1-202ENST00000389805 FAM182AQ5T1J6 154 aa18.43■□□□□ 0.54
SQSTM1-202ENST00000389805 MARK2Q7KZI7 788 aaKnown RBP18.43■□□□□ 0.54
SQSTM1-202ENST00000389805 SATL1Q86VE3 508 aa18.43■□□□□ 0.54
SQSTM1-202ENST00000389805 RBM15BQ8NDT2 890 aaKnown RBP18.43■□□□□ 0.54
SQSTM1-202ENST00000389805 GPR20Q99678 358 aa18.43■□□□□ 0.54
SQSTM1-202ENST00000389805 C10orf88Q9H8K7 445 aa18.43■□□□□ 0.54
SQSTM1-202ENST00000389805 PARVAQ9NVD7 372 aa18.43■□□□□ 0.54
SQSTM1-202ENST00000389805 NOP56O00567 594 aaKnown RBP18.42■□□□□ 0.54
SQSTM1-202ENST00000389805 DNALI1O14645 258 aaPredicted RBP18.42■□□□□ 0.54
SQSTM1-202ENST00000389805 ITGBL1O95965 494 aaPredicted RBP18.42■□□□□ 0.54
SQSTM1-202ENST00000389805 LSAMPQ13449 338 aa18.42■□□□□ 0.54
SQSTM1-202ENST00000389805 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.42■□□□□ 0.548e-7■■□□□ 14.1
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms