RNA–Protein interactions for RNA: ENST00000389195.6

LTN1-203, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 2,714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-203ENST00000389195 ANKMY2Q8IV38 441 aa10.64□□□□□ -0.71
LTN1-203ENST00000389195 RCOR2Q8IZ40 523 aa10.64□□□□□ -0.71
LTN1-203ENST00000389195 ATL2Q8NHH9 583 aa10.64□□□□□ -0.71
LTN1-203ENST00000389195 SCLYQ96I15 445 aa10.64□□□□□ -0.71
LTN1-203ENST00000389195 PGLYRP2Q96PD5 576 aa10.64□□□□□ -0.71
LTN1-203ENST00000389195 TRIM56Q9BRZ2 755 aaKnown RBP10.64□□□□□ -0.71
LTN1-203ENST00000389195 FAM114A2Q9NRY5 505 aa10.64□□□□□ -0.71
LTN1-203ENST00000389195 KRT82Q9NSB4 513 aa10.64□□□□□ -0.71
LTN1-203ENST00000389195 ETNK2Q9NVF9 386 aa10.64□□□□□ -0.71
LTN1-203ENST00000389195 MYO7AQ13402 2215 aa10.63□□□□□ -0.71
LTN1-203ENST00000389195 AVILO75366 819 aa10.63□□□□□ -0.71
LTN1-203ENST00000389195 CD4P01730 458 aa10.63□□□□□ -0.71
LTN1-203ENST00000389195 IL4RP24394 825 aa10.63□□□□□ -0.71
LTN1-203ENST00000389195 ZNF143P52747 638 aaPredicted RBP10.63□□□□□ -0.71
LTN1-203ENST00000389195 SLC6A3Q01959 620 aa10.63□□□□□ -0.71
LTN1-203ENST00000389195 LHX8Q68G74 356 aa10.63□□□□□ -0.71
LTN1-203ENST00000389195 NME8Q8N427 588 aa10.63□□□□□ -0.71
LTN1-203ENST00000389195 LRRC52Q8N7C0 313 aa10.63□□□□□ -0.71
LTN1-203ENST00000389195 SCAMP5Q8TAC9 235 aa10.63□□□□□ -0.71
LTN1-203ENST00000389195 TBCBQ99426 244 aa10.63□□□□□ -0.71
LTN1-203ENST00000389195 SH3GL2Q99962 352 aa10.63□□□□□ -0.71
LTN1-203ENST00000389195 ADAM7Q9H2U9 754 aa10.63□□□□□ -0.71
LTN1-203ENST00000389195 DHX35Q9H5Z1 703 aaKnown RBP10.63□□□□□ -0.71
LTN1-203ENST00000389195 ANLNQ9NQW6 1124 aa10.63□□□□□ -0.71
LTN1-203ENST00000389195 RASAL2Q9UJF2 1139 aa10.63□□□□□ -0.71
LTN1-203ENST00000389195 ANAPC5Q9UJX4 755 aa10.63□□□□□ -0.71
LTN1-203ENST00000389195 TRIM17Q9Y577 477 aa10.63□□□□□ -0.71
LTN1-203ENST00000389195 NUP205Q92621 2012 aa10.63□□□□□ -0.71
LTN1-203ENST00000389195 SOAT2O75908 522 aa10.63□□□□□ -0.71
LTN1-203ENST00000389195 DDHD2O94830 711 aa10.63□□□□□ -0.71
LTN1-203ENST00000389195 CSPG5O95196 566 aa10.63□□□□□ -0.71
LTN1-203ENST00000389195 BDNFP23560 247 aa10.63□□□□□ -0.71
LTN1-203ENST00000389195 GABRB2P47870 512 aa10.63□□□□□ -0.71
LTN1-203ENST00000389195 MAGOHP61326 146 aaKnown RBP10.63□□□□□ -0.71
LTN1-203ENST00000389195 CALCOCO2Q13137 446 aa10.63□□□□□ -0.71
LTN1-203ENST00000389195 TCTN1Q2MV58 587 aa10.63□□□□□ -0.71
LTN1-203ENST00000389195 IZUMO3Q5VZ72 239 aa10.63□□□□□ -0.71
LTN1-203ENST00000389195 RSPH3Q86UC2 560 aa10.63□□□□□ -0.71
LTN1-203ENST00000389195 CD302Q8IX05 232 aa10.63□□□□□ -0.71
LTN1-203ENST00000389195 DEFB106AQ8N104 65 aa10.63□□□□□ -0.71
LTN1-203ENST00000389195 SPATA18Q8TC71 538 aa10.63□□□□□ -0.71
LTN1-203ENST00000389195 ART4Q93070 314 aa10.63□□□□□ -0.71
LTN1-203ENST00000389195 PLVAPQ9BX97 442 aa10.63□□□□□ -0.71
LTN1-203ENST00000389195 CDC42EP4Q9H3Q1 356 aaKnown RBP10.63□□□□□ -0.71
LTN1-203ENST00000389195 MED4Q9NPJ6 270 aa10.63□□□□□ -0.71
LTN1-203ENST00000389195 USP34Q70CQ2 3546 aa10.62□□□□□ -0.71
LTN1-203ENST00000389195 ZNF236Q9UL36 1845 aa10.62□□□□□ -0.71
LTN1-203ENST00000389195 A0A1W2PQ45 241 aaPredicted RBP10.62□□□□□ -0.71
LTN1-203ENST00000389195 A0A1W2PQY0 241 aa10.62□□□□□ -0.71
LTN1-203ENST00000389195 YJEFN3A6XGL0 299 aa10.62□□□□□ -0.71
LTN1-203ENST00000389195 E7ENQ6 273 aa10.62□□□□□ -0.71
LTN1-203ENST00000389195 PRPSAP2O60256 369 aa10.62□□□□□ -0.71
LTN1-203ENST00000389195 PQBP1O60828 265 aaKnown RBP10.62□□□□□ -0.71
LTN1-203ENST00000389195 TJP3O95049 919 aa10.62□□□□□ -0.71
LTN1-203ENST00000389195 ATF2P15336 505 aa10.62□□□□□ -0.71
LTN1-203ENST00000389195 AXLP30530 894 aa10.62□□□□□ -0.71
LTN1-203ENST00000389195 SDC4P31431 198 aa10.62□□□□□ -0.71
LTN1-203ENST00000389195 SEC24CP53992 1094 aa10.62□□□□□ -0.71
LTN1-203ENST00000389195 CDC42EP1Q00587 391 aa10.62□□□□□ -0.71
LTN1-203ENST00000389195 KYAT1Q16773 422 aa10.62□□□□□ -0.71
LTN1-203ENST00000389195 UPP1Q16831 310 aa10.62□□□□□ -0.71
LTN1-203ENST00000389195 XKR4Q5GH76 650 aa10.62□□□□□ -0.71
LTN1-203ENST00000389195 CLEC20AQ6ZU45 233 aa10.62□□□□□ -0.71
LTN1-203ENST00000389195 CEP57Q86XR8 500 aa10.62□□□□□ -0.71
LTN1-203ENST00000389195 ANKRD52Q8NB46 1076 aa10.62□□□□□ -0.71
LTN1-203ENST00000389195 FAM76AQ8TAV0 307 aa10.62□□□□□ -0.71
LTN1-203ENST00000389195 LINC01599Q8WXQ3 324 aa10.62□□□□□ -0.71
LTN1-203ENST00000389195 GLT1D1Q96MS3 346 aa10.62□□□□□ -0.71
LTN1-203ENST00000389195 RTP3Q9BQQ7 232 aa10.62□□□□□ -0.71
LTN1-203ENST00000389195 SNRNP25Q9BV90 132 aaKnown RBP10.62□□□□□ -0.71
LTN1-203ENST00000389195 SLC4A5Q9BY07 1137 aa10.62□□□□□ -0.71
LTN1-203ENST00000389195 ACBD3Q9H3P7 528 aa10.62□□□□□ -0.71
LTN1-203ENST00000389195 RSAD1Q9HA92 442 aa10.62□□□□□ -0.71
LTN1-203ENST00000389195 NEU2Q9Y3R4 380 aa10.62□□□□□ -0.71
LTN1-203ENST00000389195 FAM187AA6NFU0 413 aa10.62□□□□□ -0.71
LTN1-203ENST00000389195 I6L893 689 aaPredicted RBP10.62□□□□□ -0.71
LTN1-203ENST00000389195 CCL23P55773 120 aa10.62□□□□□ -0.71
LTN1-203ENST00000389195 ARPP19P56211 112 aa10.62□□□□□ -0.71
LTN1-203ENST00000389195 GBE1Q04446 702 aa10.62□□□□□ -0.71
LTN1-203ENST00000389195 GABPB1Q06547 395 aaPredicted RBP10.62□□□□□ -0.71
LTN1-203ENST00000389195 DPYSL3Q14195 570 aa10.62□□□□□ -0.71
LTN1-203ENST00000389195 KRT81Q14533 505 aa10.62□□□□□ -0.71
LTN1-203ENST00000389195 CCNG2Q16589 344 aa10.62□□□□□ -0.71
LTN1-203ENST00000389195 RNF180Q86T96 592 aa10.62□□□□□ -0.71
LTN1-203ENST00000389195 TMEM110Q86TL2 294 aa10.62□□□□□ -0.71
LTN1-203ENST00000389195 ZMIZ2Q8NF64 920 aa10.62□□□□□ -0.71
LTN1-203ENST00000389195 OR10T2Q8NGX3 314 aa10.62□□□□□ -0.71
LTN1-203ENST00000389195 TXLNGYQ9BZA5 131 aa10.62□□□□□ -0.71
LTN1-203ENST00000389195 UNC93B1Q9H1C4 597 aa10.62□□□□□ -0.71
LTN1-203ENST00000389195 UPF3AQ9H1J1 476 aaKnown RBP10.62□□□□□ -0.71
LTN1-203ENST00000389195 STARD7Q9NQZ5 370 aa10.62□□□□□ -0.71
LTN1-203ENST00000389195 GPR182O15218 404 aa10.61□□□□□ -0.71
LTN1-203ENST00000389195 CREB3O43889 395 aa10.61□□□□□ -0.71
LTN1-203ENST00000389195 PPFIA2O75334 1257 aa10.61□□□□□ -0.71
LTN1-203ENST00000389195 AP1G2O75843 785 aa10.61□□□□□ -0.71
LTN1-203ENST00000389195 UPP2O95045 317 aa10.61□□□□□ -0.71
LTN1-203ENST00000389195 KLRC2P26717 231 aa10.61□□□□□ -0.71
LTN1-203ENST00000389195 FNTAP49354 379 aa10.61□□□□□ -0.71
LTN1-203ENST00000389195 TKTL1P51854 596 aa10.61□□□□□ -0.71
LTN1-203ENST00000389195 DMTNQ08495 405 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms