RNA–Protein interactions for RNA: ENST00000381551.8

PDGFB-202, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 5 BASIC

Gene PDGFB, Length 1,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-202ENST00000381551 ST7Q9NRC1 585 aa16.29■□□□□ 0.2
PDGFB-202ENST00000381551 ZNHIT6Q9NWK9 470 aaKnown RBP16.29■□□□□ 0.2
PDGFB-202ENST00000381551 SCML2Q9UQR0 700 aa16.29■□□□□ 0.2
PDGFB-202ENST00000381551 C2orf16Q68DN1 1984 aa16.29■□□□□ 0.2
PDGFB-202ENST00000381551 PIK3R2O00459 728 aa16.28■□□□□ 0.2
PDGFB-202ENST00000381551 NRG2O14511 850 aaPredicted RBP16.28■□□□□ 0.2
PDGFB-202ENST00000381551 ZBED1O96006 694 aa16.28■□□□□ 0.2
PDGFB-202ENST00000381551 USP17L7P0C7H9 530 aa16.28■□□□□ 0.2
PDGFB-202ENST00000381551 ZDHHC11BP0C7U3 371 aa16.28■□□□□ 0.2
PDGFB-202ENST00000381551 FSHRP23945 695 aa16.28■□□□□ 0.2
PDGFB-202ENST00000381551 ACADSBP45954 432 aa16.28■□□□□ 0.2
PDGFB-202ENST00000381551 PPP3CCP48454 512 aa16.28■□□□□ 0.2
PDGFB-202ENST00000381551 CDK17Q00537 523 aa16.28■□□□□ 0.2
PDGFB-202ENST00000381551 ADIGQ0VDE8 80 aa16.28■□□□□ 0.2
PDGFB-202ENST00000381551 CLEC16AQ2KHT3 1053 aa16.28■□□□□ 0.2
PDGFB-202ENST00000381551 NAA35Q5VZE5 725 aa16.28■□□□□ 0.2
PDGFB-202ENST00000381551 PTCRAQ6ISU1 281 aaPredicted RBP16.28■□□□□ 0.2
PDGFB-202ENST00000381551 CCDC186Q7Z3E2 898 aa16.28■□□□□ 0.2
PDGFB-202ENST00000381551 SCML4Q8N228 414 aa16.28■□□□□ 0.2
PDGFB-202ENST00000381551 SHKBP1Q8TBC3 707 aa16.28■□□□□ 0.2
PDGFB-202ENST00000381551 SLITRK1Q96PX8 696 aa16.28■□□□□ 0.2
PDGFB-202ENST00000381551 CPXM1Q96SM3 734 aa16.28■□□□□ 0.2
PDGFB-202ENST00000381551 CHP1Q99653 195 aa16.28■□□□□ 0.2
PDGFB-202ENST00000381551 ULBP1Q9BZM6 244 aa16.28■□□□□ 0.2
PDGFB-202ENST00000381551 POMKQ9H5K3 350 aa16.28■□□□□ 0.2
PDGFB-202ENST00000381551 CNGB3Q9NQW8 809 aa16.28■□□□□ 0.2
PDGFB-202ENST00000381551 SEPT11Q9NVA2 429 aaKnown RBP16.28■□□□□ 0.2
PDGFB-202ENST00000381551 ADAMTS1Q9UHI8 967 aa16.28■□□□□ 0.2
PDGFB-202ENST00000381551 MRPS23Q9Y3D9 190 aaKnown RBP16.28■□□□□ 0.2
PDGFB-202ENST00000381551 NCANO14594 1321 aa16.27■□□□□ 0.2
PDGFB-202ENST00000381551 CLUHO75153 1309 aa16.27■□□□□ 0.2
PDGFB-202ENST00000381551 PATJQ8NI35 1801 aa16.27■□□□□ 0.2
PDGFB-202ENST00000381551 A0A1W2PRU2 124 aa16.27■□□□□ 0.2
PDGFB-202ENST00000381551 ZNF840PA6NDX5 716 aa16.27■□□□□ 0.2
PDGFB-202ENST00000381551 E5RJQ4 531 aa16.27■□□□□ 0.2
PDGFB-202ENST00000381551 DDX3XO00571 662 aaKnown RBP eCLIP16.27■□□□□ 0.2
PDGFB-202ENST00000381551 GZMAP12544 262 aa16.27■□□□□ 0.2
PDGFB-202ENST00000381551 GJA1P17302 382 aa16.27■□□□□ 0.2
PDGFB-202ENST00000381551 CDC25CP30307 473 aa16.27■□□□□ 0.2
PDGFB-202ENST00000381551 EIF4A3P38919 411 aaKnown RBP16.27■□□□□ 0.2
PDGFB-202ENST00000381551 PGFP49763 221 aa16.27■□□□□ 0.2
PDGFB-202ENST00000381551 SMAD2Q15796 467 aaKnown RBP16.27■□□□□ 0.2
PDGFB-202ENST00000381551 PTPN20Q4JDL3 420 aa16.27■□□□□ 0.2
PDGFB-202ENST00000381551 TDRD12Q587J7 1177 aaKnown RBP16.27■□□□□ 0.2
PDGFB-202ENST00000381551 SNX30Q5VWJ9 437 aa16.27■□□□□ 0.2
PDGFB-202ENST00000381551 POTEHQ6S545 545 aa16.27■□□□□ 0.2
PDGFB-202ENST00000381551 MON1AQ86VX9 555 aa16.27■□□□□ 0.2
PDGFB-202ENST00000381551 ERICH1Q86X53 443 aa16.27■□□□□ 0.2
PDGFB-202ENST00000381551 SIX6OS1Q8N1H7 587 aa16.27■□□□□ 0.2
PDGFB-202ENST00000381551 ITFG1Q8TB96 612 aa16.27■□□□□ 0.2
PDGFB-202ENST00000381551 OVCA2Q8WZ82 227 aa16.27■□□□□ 0.2
PDGFB-202ENST00000381551 NDRG1Q92597 394 aaKnown RBP16.27■□□□□ 0.2
PDGFB-202ENST00000381551 FBXO32Q969P5 355 aa16.27■□□□□ 0.2
PDGFB-202ENST00000381551 PANX2Q96RD6 677 aa16.27■□□□□ 0.2
PDGFB-202ENST00000381551 ATXN3LQ9H3M9 355 aa16.27■□□□□ 0.2
PDGFB-202ENST00000381551 TRPM5Q9NZQ8 1165 aa16.27■□□□□ 0.2
PDGFB-202ENST00000381551 THEGQ9P2T0 379 aa16.27■□□□□ 0.2
PDGFB-202ENST00000381551 TJP2Q9UDY2 1190 aa16.27■□□□□ 0.2
PDGFB-202ENST00000381551 ZNF638Q14966 1978 aaKnown RBP16.26■□□□□ 0.19
PDGFB-202ENST00000381551 PAPSS1O43252 624 aaPredicted RBP16.26■□□□□ 0.19
PDGFB-202ENST00000381551 TADA3O75528 432 aa16.26■□□□□ 0.19
PDGFB-202ENST00000381551 FBXO21O94952 628 aa16.26■□□□□ 0.19
PDGFB-202ENST00000381551 ERBB2P04626 1255 aa16.26■□□□□ 0.19
PDGFB-202ENST00000381551 MMP8P22894 467 aa16.26■□□□□ 0.19
PDGFB-202ENST00000381551 GABRB2P47870 512 aa16.26■□□□□ 0.19
PDGFB-202ENST00000381551 SNX16P57768 344 aa16.26■□□□□ 0.19
PDGFB-202ENST00000381551 CENPCQ03188 943 aa16.26■□□□□ 0.19
PDGFB-202ENST00000381551 MAPK8IP2Q13387 824 aaPredicted RBP16.26■□□□□ 0.19
PDGFB-202ENST00000381551 TEAD2Q15562 447 aa16.26■□□□□ 0.19
PDGFB-202ENST00000381551 AAK1Q2M2I8 961 aa16.26■□□□□ 0.19
PDGFB-202ENST00000381551 ASTE1Q2TB18 679 aaPredicted RBP16.26■□□□□ 0.19
PDGFB-202ENST00000381551 ACAD10Q6JQN1 1059 aa16.26■□□□□ 0.19
PDGFB-202ENST00000381551 BHLHA9Q7RTU4 235 aa16.26■□□□□ 0.19
PDGFB-202ENST00000381551 SCD5Q86SK9 330 aa16.26■□□□□ 0.19
PDGFB-202ENST00000381551 PHF13Q86YI8 300 aaPredicted RBP16.26■□□□□ 0.19
PDGFB-202ENST00000381551 PDZD8Q8NEN9 1154 aa16.26■□□□□ 0.19
PDGFB-202ENST00000381551 C18orf8Q96DM3 657 aa16.26■□□□□ 0.19
PDGFB-202ENST00000381551 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.26■□□□□ 0.19
PDGFB-202ENST00000381551 MIS12Q9H081 205 aa16.26■□□□□ 0.19
PDGFB-202ENST00000381551 NMUR1Q9HB89 426 aa16.26■□□□□ 0.19
PDGFB-202ENST00000381551 TAS2R14Q9NYV8 317 aa16.26■□□□□ 0.19
PDGFB-202ENST00000381551 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.26■□□□□ 0.19
PDGFB-202ENST00000381551 GMIPQ9P107 970 aa16.26■□□□□ 0.19
PDGFB-202ENST00000381551 A0A087X0T9 212 aa16.25■□□□□ 0.19
PDGFB-202ENST00000381551 SSU72P8A0A1W2PR75 194 aa16.25■□□□□ 0.19
PDGFB-202ENST00000381551 FAM170AA1A519 330 aa16.25■□□□□ 0.19
PDGFB-202ENST00000381551 YJEFN3A6XGL0 299 aa16.25■□□□□ 0.19
PDGFB-202ENST00000381551 SOBPA7XYQ1 873 aa16.25■□□□□ 0.19
PDGFB-202ENST00000381551 E7ENQ6 273 aa16.25■□□□□ 0.19
PDGFB-202ENST00000381551 FAM228BP0C875 321 aa16.25■□□□□ 0.19
PDGFB-202ENST00000381551 NSFP46459 744 aaKnown RBP16.25■□□□□ 0.19
PDGFB-202ENST00000381551 DAOAP59103 153 aa16.25■□□□□ 0.19
PDGFB-202ENST00000381551 MRPS5P82675 430 aaKnown RBP16.25■□□□□ 0.19
PDGFB-202ENST00000381551 PTP4A2Q12974 167 aa16.25■□□□□ 0.19
PDGFB-202ENST00000381551 VPS36Q86VN1 386 aa16.25■□□□□ 0.19
PDGFB-202ENST00000381551 CLEC4CQ8WTT0 213 aa16.25■□□□□ 0.19
PDGFB-202ENST00000381551 ATXN2LQ8WWM7 1075 aaKnown RBP16.25■□□□□ 0.19
PDGFB-202ENST00000381551 IRGQQ8WZA9 623 aa16.25■□□□□ 0.19
PDGFB-202ENST00000381551 MRPS31Q92665 395 aaKnown RBP16.25■□□□□ 0.19
PDGFB-202ENST00000381551 FGF13Q92913 245 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms