RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 HECTD3Q5T447 861 aa13.78□□□□□ -0.2
RPAIN-202ENST00000381208 SNX30Q5VWJ9 437 aa13.78□□□□□ -0.2
RPAIN-202ENST00000381208 CEP135Q66GS9 1140 aa13.78□□□□□ -0.2
RPAIN-202ENST00000381208 FAM35AQ86V20 835 aa13.78□□□□□ -0.2
RPAIN-202ENST00000381208 C11orf74Q86VG3 221 aa13.78□□□□□ -0.2
RPAIN-202ENST00000381208 SPRYD3Q8NCJ5 442 aa13.78□□□□□ -0.2
RPAIN-202ENST00000381208 PLEKHO2Q8TD55 490 aa13.78□□□□□ -0.2
RPAIN-202ENST00000381208 DPEP3Q9H4B8 488 aa13.78□□□□□ -0.2
RPAIN-202ENST00000381208 FBXO44Q9H4M3 255 aa13.78□□□□□ -0.2
RPAIN-202ENST00000381208 SMYD3Q9H7B4 428 aa13.78□□□□□ -0.2
RPAIN-202ENST00000381208 PARD6AQ9NPB6 346 aa13.78□□□□□ -0.2
RPAIN-202ENST00000381208 SEMA4GQ9NTN9 838 aa13.78□□□□□ -0.2
RPAIN-202ENST00000381208 IL37Q9NZH6 218 aa13.78□□□□□ -0.2
RPAIN-202ENST00000381208 PCDHGA5Q9Y5G8 931 aa13.78□□□□□ -0.2
RPAIN-202ENST00000381208 CPQQ9Y646 472 aa13.78□□□□□ -0.2
RPAIN-202ENST00000381208 OBSL1O75147 1896 aa13.78□□□□□ -0.2
RPAIN-202ENST00000381208 E2F8A0AVK6 867 aa13.77□□□□□ -0.21
RPAIN-202ENST00000381208 FAM92AA1XBS5 289 aa13.77□□□□□ -0.21
RPAIN-202ENST00000381208 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.77□□□□□ -0.21
RPAIN-202ENST00000381208 CLDN5O00501 218 aa13.77□□□□□ -0.21
RPAIN-202ENST00000381208 RIOK3O14730 519 aaKnown RBP13.77□□□□□ -0.21
RPAIN-202ENST00000381208 AXIN1O15169 862 aa13.77□□□□□ -0.21
RPAIN-202ENST00000381208 VNN1O95497 513 aa13.77□□□□□ -0.21
RPAIN-202ENST00000381208 APBB3O95704 486 aa13.77□□□□□ -0.21
RPAIN-202ENST00000381208 ADH1CP00326 375 aa13.77□□□□□ -0.21
RPAIN-202ENST00000381208 ASS1P00966 412 aaKnown RBP13.77□□□□□ -0.21
RPAIN-202ENST00000381208 MBL2P11226 248 aaPredicted RBP13.77□□□□□ -0.21
RPAIN-202ENST00000381208 KRT13P13646 458 aa13.77□□□□□ -0.21
RPAIN-202ENST00000381208 VAMP7P51809 220 aa13.77□□□□□ -0.21
RPAIN-202ENST00000381208 ATXN1P54253 815 aaKnown RBP13.77□□□□□ -0.21
RPAIN-202ENST00000381208 CDH8P55286 799 aa13.77□□□□□ -0.21
RPAIN-202ENST00000381208 PKN3Q6P5Z2 889 aa13.77□□□□□ -0.21
RPAIN-202ENST00000381208 PRR23CQ6ZRP0 262 aa13.77□□□□□ -0.21
RPAIN-202ENST00000381208 SV2AQ7L0J3 742 aa13.77□□□□□ -0.21
RPAIN-202ENST00000381208 CRYBG2Q8N1P7 616 aa13.77□□□□□ -0.21
RPAIN-202ENST00000381208 GUF1Q8N442 669 aaKnown RBP13.77□□□□□ -0.21
RPAIN-202ENST00000381208 FAM160A2Q8N612 972 aaPredicted RBP13.77□□□□□ -0.21
RPAIN-202ENST00000381208 CCDC150Q8NCX0 1101 aa13.77□□□□□ -0.21
RPAIN-202ENST00000381208 RPLP0P6Q8NHW5 317 aa13.77□□□□□ -0.21
RPAIN-202ENST00000381208 DDX1Q92499 740 aaKnown RBP13.77□□□□□ -0.21
RPAIN-202ENST00000381208 RNF25Q96BH1 459 aaPredicted RBP13.77□□□□□ -0.21
RPAIN-202ENST00000381208 FAXDC2Q96IV6 333 aa13.77□□□□□ -0.21
RPAIN-202ENST00000381208 ZC3H10Q96K80 434 aaKnown RBP13.77□□□□□ -0.21
RPAIN-202ENST00000381208 RNF38Q9H0F5 515 aa13.77□□□□□ -0.21
RPAIN-202ENST00000381208 LINC00597Q9H2U6 94 aa13.77□□□□□ -0.21
RPAIN-202ENST00000381208 CYP3A43Q9HB55 503 aa13.77□□□□□ -0.21
RPAIN-202ENST00000381208 FBRSL1Q9HCM7 1045 aaKnown RBP13.77□□□□□ -0.21
RPAIN-202ENST00000381208 C2orf42Q9NWW7 574 aa13.77□□□□□ -0.21
RPAIN-202ENST00000381208 EBF1Q9UH73 591 aa13.77□□□□□ -0.21
RPAIN-202ENST00000381208 PTPRDP23468 1912 aa13.76□□□□□ -0.21
RPAIN-202ENST00000381208 ANAPC1Q9H1A4 1944 aa13.76□□□□□ -0.21
RPAIN-202ENST00000381208 NCOR2Q9Y618 2525 aa13.76□□□□□ -0.21
RPAIN-202ENST00000381208 AP1G2O75843 785 aa13.76□□□□□ -0.21
RPAIN-202ENST00000381208 NR2F2P24468 414 aa13.76□□□□□ -0.21
RPAIN-202ENST00000381208 PIK3CAP42336 1068 aa13.76□□□□□ -0.21
RPAIN-202ENST00000381208 NDUFA8P51970 172 aa13.76□□□□□ -0.21
RPAIN-202ENST00000381208 SLC5A3P53794 718 aa13.76□□□□□ -0.21
RPAIN-202ENST00000381208 MRPS21P82921 87 aaKnown RBP13.76□□□□□ -0.21
RPAIN-202ENST00000381208 IFRD2Q12894 506 aaPredicted RBP13.76□□□□□ -0.21
RPAIN-202ENST00000381208 SRSF5Q13243 272 aaKnown RBP13.76□□□□□ -0.21
RPAIN-202ENST00000381208 DMC1Q14565 340 aa13.76□□□□□ -0.21
RPAIN-202ENST00000381208 NUDT18Q6ZVK8 323 aa13.76□□□□□ -0.21
RPAIN-202ENST00000381208 FILIP1Q7Z7B0 1213 aa13.76□□□□□ -0.21
RPAIN-202ENST00000381208 ADGRG2Q8IZP9 1017 aa13.76□□□□□ -0.21
RPAIN-202ENST00000381208 TTC39CQ8N584 583 aa13.76□□□□□ -0.21
RPAIN-202ENST00000381208 FAM124BQ9H5Z6 455 aaPredicted RBP13.76□□□□□ -0.21
RPAIN-202ENST00000381208 CFAP97Q9P2B7 532 aa13.76□□□□□ -0.21
RPAIN-202ENST00000381208 GREB1Q4ZG55 1949 aa13.76□□□□□ -0.21
RPAIN-202ENST00000381208 SDK1Q7Z5N4 2213 aa13.76□□□□□ -0.21
RPAIN-202ENST00000381208 SPTBN2O15020 2390 aa13.75□□□□□ -0.21
RPAIN-202ENST00000381208 TNFRSF10BO14763 440 aa13.75□□□□□ -0.21
RPAIN-202ENST00000381208 SLC30A4O14863 429 aa13.75□□□□□ -0.21
RPAIN-202ENST00000381208 RHOBTB1O94844 696 aa13.75□□□□□ -0.21
RPAIN-202ENST00000381208 CYP17A1P05093 508 aa13.75□□□□□ -0.21
RPAIN-202ENST00000381208 GTF2H1P32780 548 aa13.75□□□□□ -0.21
RPAIN-202ENST00000381208 PSMC2P35998 433 aaKnown RBP13.75□□□□□ -0.21
RPAIN-202ENST00000381208 RAP1GAPP47736 663 aa13.75□□□□□ -0.21
RPAIN-202ENST00000381208 NDST1P52848 882 aa13.75□□□□□ -0.21
RPAIN-202ENST00000381208 CACNA2D1P54289 1103 aa13.75□□□□□ -0.21
RPAIN-202ENST00000381208 ZXDBP98169 803 aa13.75□□□□□ -0.21
RPAIN-202ENST00000381208 DPYDQ12882 1025 aa13.75□□□□□ -0.21
RPAIN-202ENST00000381208 DHCR24Q15392 516 aa13.75□□□□□ -0.21
RPAIN-202ENST00000381208 ELF2Q15723 593 aa13.75□□□□□ -0.21
RPAIN-202ENST00000381208 SCARA5Q6ZMJ2 495 aa13.75□□□□□ -0.21
RPAIN-202ENST00000381208 KRBA2Q6ZNG9 492 aa13.75□□□□□ -0.21
RPAIN-202ENST00000381208 ACOT1Q86TX2 421 aa13.75□□□□□ -0.21
RPAIN-202ENST00000381208 FUKQ8N0W3 1084 aa13.75□□□□□ -0.21
RPAIN-202ENST00000381208 TSTD1Q8NFU3 115 aa13.75□□□□□ -0.21
RPAIN-202ENST00000381208 USP33Q8TEY7 942 aa13.75□□□□□ -0.21
RPAIN-202ENST00000381208 KCNK16Q96T55 309 aa13.75□□□□□ -0.21
RPAIN-202ENST00000381208 GTPBP4Q9BZE4 634 aaKnown RBP13.75□□□□□ -0.21
RPAIN-202ENST00000381208 NACA2Q9H009 215 aa13.75□□□□□ -0.21
RPAIN-202ENST00000381208 CSNK1G1Q9HCP0 422 aa13.75□□□□□ -0.21
RPAIN-202ENST00000381208 PNPLA8Q9NP80 782 aa13.75□□□□□ -0.21
RPAIN-202ENST00000381208 KRT82Q9NSB4 513 aa13.75□□□□□ -0.21
RPAIN-202ENST00000381208 TMEM30AQ9NV96 361 aa13.75□□□□□ -0.21
RPAIN-202ENST00000381208 SMPD4Q9NXE4 827 aa13.75□□□□□ -0.21
RPAIN-202ENST00000381208 SH3BP1Q9Y3L3 701 aa13.75□□□□□ -0.21
RPAIN-202ENST00000381208 DNAH14Q0VDD8 3507 aa13.75□□□□□ -0.21
RPAIN-202ENST00000381208 ALDH1A2O94788 518 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms