RNA–Protein interactions for RNA: ENST00000381196.8

PTPRD-203, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-203ENST00000381196 ABHD8Q96I13 439 aa5.05□□□□□ -1.6
PTPRD-203ENST00000381196 MMTAG2Q9BU76 263 aaKnown RBP5.05□□□□□ -1.6
PTPRD-203ENST00000381196 USE1Q9NZ43 259 aa5.05□□□□□ -1.6
PTPRD-203ENST00000381196 ITGA11Q9UKX5 1188 aa5.05□□□□□ -1.6
PTPRD-203ENST00000381196 CCDC154A6NI56 674 aa5.05□□□□□ -1.6
PTPRD-203ENST00000381196 TCP11X1B4DZS4 312 aa5.05□□□□□ -1.6
PTPRD-203ENST00000381196 F8VZ95 297 aa5.05□□□□□ -1.6
PTPRD-203ENST00000381196 ENC1O14682 589 aa5.05□□□□□ -1.6
PTPRD-203ENST00000381196 GNB5O14775 395 aa5.05□□□□□ -1.6
PTPRD-203ENST00000381196 VEGFAP15692 232 aaPredicted RBP5.05□□□□□ -1.6
PTPRD-203ENST00000381196 HARS2P49590 506 aaKnown RBP5.05□□□□□ -1.6
PTPRD-203ENST00000381196 HADHBP55084 474 aaKnown RBP5.05□□□□□ -1.6
PTPRD-203ENST00000381196 RNASE9P60153 205 aaKnown RBP5.05□□□□□ -1.6
PTPRD-203ENST00000381196 TMPRSS15P98073 1019 aa5.05□□□□□ -1.6
PTPRD-203ENST00000381196 C2orf54Q08AI8 447 aa5.05□□□□□ -1.6
PTPRD-203ENST00000381196 TRAP1Q12931 704 aaKnown RBP5.05□□□□□ -1.6
PTPRD-203ENST00000381196 FBXO43Q4G163 708 aa5.05□□□□□ -1.6
PTPRD-203ENST00000381196 SPANXN2Q5MJ10 180 aa5.05□□□□□ -1.6
PTPRD-203ENST00000381196 U2AF1L4Q8WU68 220 aaKnown RBP5.05□□□□□ -1.6
PTPRD-203ENST00000381196 ACOT12Q8WYK0 555 aa5.05□□□□□ -1.6
PTPRD-203ENST00000381196 TRIM8Q9BZR9 551 aa5.05□□□□□ -1.6
PTPRD-203ENST00000381196 MANSC1Q9H8J5 431 aa5.05□□□□□ -1.6
PTPRD-203ENST00000381196 IGSF9Q9P2J2 1179 aa5.05□□□□□ -1.6
PTPRD-203ENST00000381196 TPRKBQ9Y3C4 175 aa5.05□□□□□ -1.6
PTPRD-203ENST00000381196 MFHAS1Q9Y4C4 1052 aa5.05□□□□□ -1.6
PTPRD-203ENST00000381196 GPC6Q9Y625 555 aaPredicted RBP5.05□□□□□ -1.6
PTPRD-203ENST00000381196 TIMM44O43615 452 aa5.05□□□□□ -1.6
PTPRD-203ENST00000381196 SIN3BO75182 1162 aa5.05□□□□□ -1.6
PTPRD-203ENST00000381196 BAG2O95816 211 aa5.05□□□□□ -1.6
PTPRD-203ENST00000381196 C6orf222P0C671 652 aaPredicted RBP5.05□□□□□ -1.6
PTPRD-203ENST00000381196 RALBP11234 206 aa5.05□□□□□ -1.6
PTPRD-203ENST00000381196 PTDSS1P48651 473 aaKnown RBP5.05□□□□□ -1.6
PTPRD-203ENST00000381196 C21orf59P57076 290 aa5.05□□□□□ -1.6
PTPRD-203ENST00000381196 AP3S2P59780 193 aa5.05□□□□□ -1.6
PTPRD-203ENST00000381196 TBL3Q12788 808 aaKnown RBP5.05□□□□□ -1.6
PTPRD-203ENST00000381196 MTERF2Q49AM1 385 aa5.05□□□□□ -1.6
PTPRD-203ENST00000381196 ZC2HC1CQ53FD0 456 aaPredicted RBP5.05□□□□□ -1.6
PTPRD-203ENST00000381196 FBXW10Q5XX13 1052 aa5.05□□□□□ -1.6
PTPRD-203ENST00000381196 KCTD1Q719H9 257 aa5.05□□□□□ -1.6
PTPRD-203ENST00000381196 CIDECQ96AQ7 238 aaPredicted RBP5.05□□□□□ -1.6
PTPRD-203ENST00000381196 RAPGEFL1Q9UHV5 662 aa5.05□□□□□ -1.6
PTPRD-203ENST00000381196 ARIH1Q9Y4X5 557 aaPredicted RBP5.05□□□□□ -1.6
PTPRD-203ENST00000381196 PALMO75781 387 aa5.05□□□□□ -1.6
PTPRD-203ENST00000381196 SUPT7LO94864 414 aa5.05□□□□□ -1.6
PTPRD-203ENST00000381196 DPEP1P16444 411 aa5.05□□□□□ -1.6
PTPRD-203ENST00000381196 ARL4DP49703 201 aa5.05□□□□□ -1.6
PTPRD-203ENST00000381196 TNFAIP2Q03169 654 aa5.05□□□□□ -1.6
PTPRD-203ENST00000381196 TOB2Q14106 344 aaPredicted RBP5.05□□□□□ -1.6
PTPRD-203ENST00000381196 TMED2Q15363 201 aa5.05□□□□□ -1.6
PTPRD-203ENST00000381196 HABP4Q5JVS0 413 aaKnown RBP5.05□□□□□ -1.6
PTPRD-203ENST00000381196 TTC33Q6PID6 262 aaPredicted RBP5.05□□□□□ -1.6
PTPRD-203ENST00000381196 MB21D2Q8IYB1 491 aaPredicted RBP5.05□□□□□ -1.6
PTPRD-203ENST00000381196 THNSL1Q8IYQ7 743 aa5.05□□□□□ -1.6
PTPRD-203ENST00000381196 CHPFQ8IZ52 775 aa5.05□□□□□ -1.6
PTPRD-203ENST00000381196 GJD3Q8N144 294 aa5.05□□□□□ -1.6
PTPRD-203ENST00000381196 AMER2Q8N7J2 671 aa5.05□□□□□ -1.6
PTPRD-203ENST00000381196 FBXL13Q8NEE6 735 aa5.05□□□□□ -1.6
PTPRD-203ENST00000381196 ATP6V1E2Q96A05 226 aa5.05□□□□□ -1.6
PTPRD-203ENST00000381196 APOPT1Q96IL0 206 aa5.05□□□□□ -1.6
PTPRD-203ENST00000381196 TCEAL7Q9BRU2 100 aa5.05□□□□□ -1.6
PTPRD-203ENST00000381196 SLC7A5P2Q9GIP4 190 aa5.05□□□□□ -1.6
PTPRD-203ENST00000381196 MAP3K20Q9NYL2 800 aaKnown RBP5.05□□□□□ -1.6
PTPRD-203ENST00000381196 GGA3Q9NZ52 723 aa5.05□□□□□ -1.6
PTPRD-203ENST00000381196 GRID1Q9ULK0 1009 aa5.05□□□□□ -1.6
PTPRD-203ENST00000381196 L3MBTL1Q9Y468 752 aa5.05□□□□□ -1.6
PTPRD-203ENST00000381196 LRRC42Q9Y546 428 aa5.05□□□□□ -1.6
PTPRD-203ENST00000381196 TRIM17Q9Y577 477 aa5.05□□□□□ -1.6
PTPRD-203ENST00000381196 LOC110117498-PIK3R3F6TDL0 507 aa5.04□□□□□ -1.6
PTPRD-203ENST00000381196 LRP6O75581 1613 aa5.04□□□□□ -1.6
PTPRD-203ENST00000381196 PSMG1O95456 288 aa5.04□□□□□ -1.6
PTPRD-203ENST00000381196 S100A9P06702 114 aaKnown RBP5.04□□□□□ -1.6
PTPRD-203ENST00000381196 WEE2P0C1S8 567 aa5.04□□□□□ -1.6
PTPRD-203ENST00000381196 UMPSP11172 480 aa5.04□□□□□ -1.6
PTPRD-203ENST00000381196 NR4A1P22736 598 aa5.04□□□□□ -1.6
PTPRD-203ENST00000381196 NR2F2P24468 414 aa5.04□□□□□ -1.6
PTPRD-203ENST00000381196 RPS12P25398 132 aaKnown RBP5.04□□□□□ -1.6
PTPRD-203ENST00000381196 STAT3P40763 770 aa5.04□□□□□ -1.6
PTPRD-203ENST00000381196 PLTPP55058 493 aa5.04□□□□□ -1.6
PTPRD-203ENST00000381196 CDC42EP1Q00587 391 aa5.04□□□□□ -1.6
PTPRD-203ENST00000381196 CAMK1Q14012 370 aa5.04□□□□□ -1.6
PTPRD-203ENST00000381196 NCAPHQ15003 741 aa5.04□□□□□ -1.6
PTPRD-203ENST00000381196 EFTUD2Q15029 972 aaKnown RBP eCLIP5.04□□□□□ -1.6
PTPRD-203ENST00000381196 ARHGAP44Q17R89 818 aa5.04□□□□□ -1.6
PTPRD-203ENST00000381196 RELL1Q8IUW5 271 aa5.04□□□□□ -1.6
PTPRD-203ENST00000381196 ERI1Q8IV48 349 aaKnown RBP5.04□□□□□ -1.6
PTPRD-203ENST00000381196 PIK3R3Q92569 461 aa5.04□□□□□ -1.6
PTPRD-203ENST00000381196 GPR101Q96P66 508 aaPredicted RBP5.04□□□□□ -1.6
PTPRD-203ENST00000381196 ELAC2Q9BQ52 826 aaKnown RBP5.04□□□□□ -1.6
PTPRD-203ENST00000381196 VPS54Q9P1Q0 977 aa5.04□□□□□ -1.6
PTPRD-203ENST00000381196 GSAPA4D1B5 854 aa5.04□□□□□ -1.6
PTPRD-203ENST00000381196 MPZL2O60487 215 aa5.04□□□□□ -1.6
PTPRD-203ENST00000381196 SLC4A1P02730 911 aa5.04□□□□□ -1.6
PTPRD-203ENST00000381196 RPS17P08708 135 aaKnown RBP5.04□□□□□ -1.6
PTPRD-203ENST00000381196 PORP16435 677 aaPredicted RBP5.04□□□□□ -1.6
PTPRD-203ENST00000381196 PRKCIP41743 596 aa5.04□□□□□ -1.6
PTPRD-203ENST00000381196 GRIA2P42262 883 aa5.04□□□□□ -1.6
PTPRD-203ENST00000381196 ATP6V0D1P61421 351 aa5.04□□□□□ -1.6
PTPRD-203ENST00000381196 GRIK3Q13003 919 aa5.04□□□□□ -1.6
PTPRD-203ENST00000381196 TCEAL1Q15170 157 aa5.04□□□□□ -1.6
PTPRD-203ENST00000381196 NFIL3Q16649 462 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms