RNA–Protein interactions for RNA: ENST00000381118.7

ERCC8-202, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 2

Gene ERCC8, Length 2,236 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-202ENST00000381118 ATXN1P54253 815 aaKnown RBP8.38□□□□□ -1.07
ERCC8-202ENST00000381118 SLC25A11Q02978 314 aaKnown RBP8.38□□□□□ -1.07
ERCC8-202ENST00000381118 FPGSQ05932 587 aa8.38□□□□□ -1.07
ERCC8-202ENST00000381118 SDHAF4Q5VUM1 108 aa8.38□□□□□ -1.07
ERCC8-202ENST00000381118 KAZNQ674X7 775 aa8.38□□□□□ -1.07
ERCC8-202ENST00000381118 C8orf74Q6P047 294 aa8.38□□□□□ -1.07
ERCC8-202ENST00000381118 KCNT2Q6UVM3 1135 aa8.38□□□□□ -1.07
ERCC8-202ENST00000381118 RSPO2Q6UXX9 243 aaPredicted RBP8.38□□□□□ -1.07
ERCC8-202ENST00000381118 HFE2Q6ZVN8 426 aa8.38□□□□□ -1.07
ERCC8-202ENST00000381118 SLC26A9Q7LBE3 791 aa8.38□□□□□ -1.07
ERCC8-202ENST00000381118 ZNF572Q7Z3I7 529 aaPredicted RBP8.38□□□□□ -1.07
ERCC8-202ENST00000381118 DCP1BQ8IZD4 617 aaKnown RBP8.38□□□□□ -1.07
ERCC8-202ENST00000381118 TTC9BQ8N6N2 239 aa8.38□□□□□ -1.07
ERCC8-202ENST00000381118 SCAMP5Q8TAC9 235 aa8.38□□□□□ -1.07
ERCC8-202ENST00000381118 FAM172AQ8WUF8 416 aa8.38□□□□□ -1.07
ERCC8-202ENST00000381118 KCTD13Q8WZ19 329 aa8.38□□□□□ -1.07
ERCC8-202ENST00000381118 HSPH1Q92598 858 aa8.38□□□□□ -1.07
ERCC8-202ENST00000381118 LRRC1Q9BTT6 524 aa8.38□□□□□ -1.07
ERCC8-202ENST00000381118 TTPALQ9BTX7 342 aa8.38□□□□□ -1.07
ERCC8-202ENST00000381118 PLVAPQ9BX97 442 aa8.38□□□□□ -1.07
ERCC8-202ENST00000381118 DMAP1Q9NPF5 467 aaPredicted RBP8.38□□□□□ -1.07
ERCC8-202ENST00000381118 CYLDQ9NQC7 956 aa8.38□□□□□ -1.07
ERCC8-202ENST00000381118 COX16Q9P0S2 106 aa8.38□□□□□ -1.07
ERCC8-202ENST00000381118 LCMT1Q9UIC8 334 aa8.38□□□□□ -1.07
ERCC8-202ENST00000381118 USP18Q9UMW8 372 aa8.38□□□□□ -1.07
ERCC8-202ENST00000381118 MRPL42Q9Y6G3 142 aaKnown RBP8.38□□□□□ -1.07
ERCC8-202ENST00000381118 LRRD1A4D1F6 860 aa8.38□□□□□ -1.07
ERCC8-202ENST00000381118 YJEFN3A6XGL0 299 aa8.38□□□□□ -1.07
ERCC8-202ENST00000381118 HHLA1C9JL84 531 aa8.38□□□□□ -1.07
ERCC8-202ENST00000381118 E7ENQ6 273 aa8.38□□□□□ -1.07
ERCC8-202ENST00000381118 CAPN9O14815 690 aa8.38□□□□□ -1.07
ERCC8-202ENST00000381118 EFCAB14O75071 495 aa8.38□□□□□ -1.07
ERCC8-202ENST00000381118 SOAT2O75908 522 aa8.38□□□□□ -1.07
ERCC8-202ENST00000381118 BAIAP3O94812 1187 aa8.38□□□□□ -1.07
ERCC8-202ENST00000381118 CSPG5O95196 566 aa8.38□□□□□ -1.07
ERCC8-202ENST00000381118 ZRANB2O95218 330 aaKnown RBP eCLIP8.38□□□□□ -1.07
ERCC8-202ENST00000381118 FGBP02675 491 aa8.38□□□□□ -1.07
ERCC8-202ENST00000381118 EPHB4P54760 987 aa8.38□□□□□ -1.07
ERCC8-202ENST00000381118 ELAVL2Q12926 359 aaKnown RBP8.38□□□□□ -1.07
ERCC8-202ENST00000381118 DDR2Q16832 855 aa8.38□□□□□ -1.07
ERCC8-202ENST00000381118 HADHQ16836 314 aaKnown RBP8.38□□□□□ -1.07
ERCC8-202ENST00000381118 DCAF6Q58WW2 860 aa8.38□□□□□ -1.07
ERCC8-202ENST00000381118 EFHC1Q5JVL4 640 aa8.38□□□□□ -1.07
ERCC8-202ENST00000381118 KIAA1841Q6NSI8 718 aa8.38□□□□□ -1.07
ERCC8-202ENST00000381118 ANKS1BQ7Z6G8 1248 aa8.38□□□□□ -1.07
ERCC8-202ENST00000381118 SLC13A5Q86YT5 568 aaPredicted RBP8.38□□□□□ -1.07
ERCC8-202ENST00000381118 DEFB106AQ8N104 65 aa8.38□□□□□ -1.07
ERCC8-202ENST00000381118 GPR161Q8N6U8 529 aaKnown RBP8.38□□□□□ -1.07
ERCC8-202ENST00000381118 ATAD1Q8NBU5 361 aa8.38□□□□□ -1.07
ERCC8-202ENST00000381118 GPR152Q8TDT2 470 aa8.38□□□□□ -1.07
ERCC8-202ENST00000381118 HDAC7Q8WUI4 952 aa8.38□□□□□ -1.07
ERCC8-202ENST00000381118 RIN2Q8WYP3 895 aaPredicted RBP8.38□□□□□ -1.07
ERCC8-202ENST00000381118 TMEM169Q96HH4 297 aa8.38□□□□□ -1.07
ERCC8-202ENST00000381118 IGSF21Q96ID5 467 aa8.38□□□□□ -1.07
ERCC8-202ENST00000381118 PEBP4Q96S96 227 aa8.38□□□□□ -1.07
ERCC8-202ENST00000381118 PNKPQ96T60 521 aa8.38□□□□□ -1.07
ERCC8-202ENST00000381118 HERPUD2Q9BSE4 406 aa8.38□□□□□ -1.07
ERCC8-202ENST00000381118 CNPY3Q9BT09 278 aa8.38□□□□□ -1.07
ERCC8-202ENST00000381118 VN1R3Q9BXE9 311 aa8.38□□□□□ -1.07
ERCC8-202ENST00000381118 ADAM33Q9BZ11 813 aa8.38□□□□□ -1.07
ERCC8-202ENST00000381118 RC3H2Q9HBD1 1191 aaKnown RBP8.38□□□□□ -1.07
ERCC8-202ENST00000381118 CSNK1G1Q9HCP0 422 aa8.38□□□□□ -1.07
ERCC8-202ENST00000381118 CXXC1Q9P0U4 656 aaPredicted RBP8.38□□□□□ -1.07
ERCC8-202ENST00000381118 ZMYND8Q9ULU4 1186 aaPredicted RBP8.38□□□□□ -1.07
ERCC8-202ENST00000381118 CDY1Q9Y6F8 540 aa8.38□□□□□ -1.07
ERCC8-202ENST00000381118 GREB1Q4ZG55 1949 aa8.38□□□□□ -1.07
ERCC8-202ENST00000381118 HSF2BPO75031 334 aa8.37□□□□□ -1.07
ERCC8-202ENST00000381118 RALAP11233 206 aa8.37□□□□□ -1.07
ERCC8-202ENST00000381118 KRT10P13645 584 aa8.37□□□□□ -1.07
ERCC8-202ENST00000381118 CAPN2P17655 700 aa8.37□□□□□ -1.07
ERCC8-202ENST00000381118 DNAJB2P25686 324 aa8.37□□□□□ -1.07
ERCC8-202ENST00000381118 SULT1E1P49888 294 aa8.37□□□□□ -1.07
ERCC8-202ENST00000381118 SLC5A3P53794 718 aa8.37□□□□□ -1.07
ERCC8-202ENST00000381118 DAOAP59103 153 aa8.37□□□□□ -1.07
ERCC8-202ENST00000381118 YWHAZP63104 245 aaKnown RBP8.37□□□□□ -1.07
ERCC8-202ENST00000381118 PITX1P78337 314 aaPredicted RBP8.37□□□□□ -1.07
ERCC8-202ENST00000381118 ITIH3Q06033 890 aa8.37□□□□□ -1.07
ERCC8-202ENST00000381118 PPIGQ13427 754 aaKnown RBP eCLIP8.37□□□□□ -1.07
ERCC8-202ENST00000381118 MRPL58Q14197 206 aaKnown RBP8.37□□□□□ -1.07
ERCC8-202ENST00000381118 USP41Q3LFD5 358 aa8.37□□□□□ -1.07
ERCC8-202ENST00000381118 RAB41Q5JT25 222 aa8.37□□□□□ -1.07
ERCC8-202ENST00000381118 KATNAL2Q8IYT4 538 aa8.37□□□□□ -1.07
ERCC8-202ENST00000381118 ZDHHC14Q8IZN3 488 aa8.37□□□□□ -1.07
ERCC8-202ENST00000381118 ADAM32Q8TC27 787 aa8.37□□□□□ -1.07
ERCC8-202ENST00000381118 RAPGEF5Q92565 580 aa8.37□□□□□ -1.07
ERCC8-202ENST00000381118 ZNF558Q96NG5 402 aa8.37□□□□□ -1.07
ERCC8-202ENST00000381118 NAP1L3Q99457 506 aaPredicted RBP8.37□□□□□ -1.07
ERCC8-202ENST00000381118 FAM118BQ9BPY3 351 aa8.37□□□□□ -1.07
ERCC8-202ENST00000381118 ZBED2Q9BTP6 218 aa8.37□□□□□ -1.07
ERCC8-202ENST00000381118 PARD6BQ9BYG5 372 aa8.37□□□□□ -1.07
ERCC8-202ENST00000381118 POPDC2Q9HBU9 364 aa8.37□□□□□ -1.07
ERCC8-202ENST00000381118 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.37□□□□□ -1.07
ERCC8-202ENST00000381118 CALCOCO1Q9P1Z2 691 aa8.37□□□□□ -1.07
ERCC8-202ENST00000381118 TTC7AQ9ULT0 858 aaPredicted RBP8.37□□□□□ -1.07
ERCC8-202ENST00000381118 NAALADL1Q9UQQ1 740 aa8.37□□□□□ -1.07
ERCC8-202ENST00000381118 SLC27A5Q9Y2P5 690 aa8.37□□□□□ -1.07
ERCC8-202ENST00000381118 PLXNA4Q9HCM2 1894 aa8.37□□□□□ -1.07
ERCC8-202ENST00000381118 GOLGA6L10A0A0M3HER8 536 aa8.37□□□□□ -1.07
ERCC8-202ENST00000381118 PRPSAP2O60256 369 aa8.37□□□□□ -1.07
ERCC8-202ENST00000381118 ZBED1O96006 694 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms