RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 PPM1EQ8WY54 764 aa8.33□□□□□ -1.08
PDLIM5-204ENST00000380176 SNX27Q96L92 541 aa8.33□□□□□ -1.08
PDLIM5-204ENST00000380176 WDR83Q9BRX9 315 aaKnown RBP8.33□□□□□ -1.08
PDLIM5-204ENST00000380176 CCDC134Q9H6E4 229 aa8.33□□□□□ -1.08
PDLIM5-204ENST00000380176 ASNSD1Q9NWL6 643 aa8.33□□□□□ -1.08
PDLIM5-204ENST00000380176 GPATCH2LQ9NWQ4 482 aa8.33□□□□□ -1.08
PDLIM5-204ENST00000380176 KLK14Q9P0G3 267 aa8.33□□□□□ -1.08
PDLIM5-204ENST00000380176 GGA2Q9UJY4 613 aa8.33□□□□□ -1.08
PDLIM5-204ENST00000380176 ZMIZ1Q9ULJ6 1067 aa8.33□□□□□ -1.08
PDLIM5-204ENST00000380176 ZNF638Q14966 1978 aaKnown RBP8.33□□□□□ -1.08
PDLIM5-204ENST00000380176 EXOC1LA0A1B0GW35 172 aa8.33□□□□□ -1.08
PDLIM5-204ENST00000380176 POC1B-GALNT4F8VUJ3 575 aa8.33□□□□□ -1.08
PDLIM5-204ENST00000380176 CDH16O75309 829 aa8.33□□□□□ -1.08
PDLIM5-204ENST00000380176 VIMP08670 466 aaKnown RBP8.33□□□□□ -1.08
PDLIM5-204ENST00000380176 CDH6P55285 790 aa8.33□□□□□ -1.08
PDLIM5-204ENST00000380176 EIF3EP60228 445 aaKnown RBP8.33□□□□□ -1.08
PDLIM5-204ENST00000380176 STAT4Q14765 748 aa8.33□□□□□ -1.08
PDLIM5-204ENST00000380176 TMED2Q15363 201 aa8.33□□□□□ -1.08
PDLIM5-204ENST00000380176 FAM110CQ1W6H9 321 aa8.33□□□□□ -1.08
PDLIM5-204ENST00000380176 ZC3H12AQ5D1E8 599 aaKnown RBP8.33□□□□□ -1.08
PDLIM5-204ENST00000380176 SYCP2LQ5T4T6 812 aa8.33□□□□□ -1.08
PDLIM5-204ENST00000380176 ZNF618Q5T7W0 954 aa8.33□□□□□ -1.08
PDLIM5-204ENST00000380176 TMEM164Q5U3C3 297 aa8.33□□□□□ -1.08
PDLIM5-204ENST00000380176 SPRYD7Q5W111 196 aa8.33□□□□□ -1.08
PDLIM5-204ENST00000380176 OLFML2BQ68BL8 750 aa8.33□□□□□ -1.08
PDLIM5-204ENST00000380176 PIGWQ7Z7B1 504 aa8.33□□□□□ -1.08
PDLIM5-204ENST00000380176 NT5DC4Q86YG4 428 aa8.33□□□□□ -1.08
PDLIM5-204ENST00000380176 LRRN4Q8WUT4 740 aa8.33□□□□□ -1.08
PDLIM5-204ENST00000380176 MAML1Q92585 1016 aa8.33□□□□□ -1.08
PDLIM5-204ENST00000380176 ELAC2Q9BQ52 826 aaKnown RBP8.33□□□□□ -1.08
PDLIM5-204ENST00000380176 CNPY3Q9BT09 278 aa8.33□□□□□ -1.08
PDLIM5-204ENST00000380176 ANKRD33BA6NCL7 494 aa8.33□□□□□ -1.08
PDLIM5-204ENST00000380176 APOC4-APOC2K7ER74 178 aa8.33□□□□□ -1.08
PDLIM5-204ENST00000380176 DNM1LO00429 736 aa8.33□□□□□ -1.08
PDLIM5-204ENST00000380176 SPTLC1O15269 473 aa8.33□□□□□ -1.08
PDLIM5-204ENST00000380176 ALOX15BO15296 676 aa8.33□□□□□ -1.08
PDLIM5-204ENST00000380176 RECQL4O94761 1208 aa8.33□□□□□ -1.08
PDLIM5-204ENST00000380176 ENDOD1O94919 500 aa8.33□□□□□ -1.08
PDLIM5-204ENST00000380176 MAP3K6O95382 1288 aa8.33□□□□□ -1.08
PDLIM5-204ENST00000380176 APOC2P02655 101 aa8.33□□□□□ -1.08
PDLIM5-204ENST00000380176 ABHD2P08910 425 aa8.33□□□□□ -1.08
PDLIM5-204ENST00000380176 RBP3P10745 1247 aa8.33□□□□□ -1.08
PDLIM5-204ENST00000380176 GPX6P59796 221 aa8.33□□□□□ -1.08
PDLIM5-204ENST00000380176 DPYSL3Q14195 570 aa8.33□□□□□ -1.08
PDLIM5-204ENST00000380176 CCL14Q16627 93 aa8.33□□□□□ -1.08
PDLIM5-204ENST00000380176 SOWAHAQ2M3V2 549 aa8.33□□□□□ -1.08
PDLIM5-204ENST00000380176 DCAF4L1Q3SXM0 396 aa8.33□□□□□ -1.08
PDLIM5-204ENST00000380176 OLFML1Q6UWY5 402 aa8.33□□□□□ -1.08
PDLIM5-204ENST00000380176 ALKAL1Q6UXT8 129 aa8.33□□□□□ -1.08
PDLIM5-204ENST00000380176 ZC3H18Q86VM9 953 aaKnown RBP8.33□□□□□ -1.08
PDLIM5-204ENST00000380176 TAX1BP1Q86VP1 789 aa8.33□□□□□ -1.08
PDLIM5-204ENST00000380176 NAT8LQ8N9F0 302 aa8.33□□□□□ -1.08
PDLIM5-204ENST00000380176 SPATA18Q8TC71 538 aa8.33□□□□□ -1.08
PDLIM5-204ENST00000380176 CLEC4CQ8WTT0 213 aa8.33□□□□□ -1.08
PDLIM5-204ENST00000380176 SLC35F5Q8WV83 523 aa8.33□□□□□ -1.08
PDLIM5-204ENST00000380176 RSAD2Q8WXG1 361 aa8.33□□□□□ -1.08
PDLIM5-204ENST00000380176 MAGEB5Q9BZ81 275 aa8.33□□□□□ -1.08
PDLIM5-204ENST00000380176 GCOM2Q9BZD3 368 aaPredicted RBP8.33□□□□□ -1.08
PDLIM5-204ENST00000380176 FOXP3Q9BZS1 431 aa8.33□□□□□ -1.08
PDLIM5-204ENST00000380176 MIS12Q9H081 205 aa8.33□□□□□ -1.08
PDLIM5-204ENST00000380176 VPS37BQ9H9H4 285 aa8.33□□□□□ -1.08
PDLIM5-204ENST00000380176 KIF9Q9HAQ2 790 aa8.33□□□□□ -1.08
PDLIM5-204ENST00000380176 GOLGA2P5Q9HBQ8 144 aa8.33□□□□□ -1.08
PDLIM5-204ENST00000380176 HMX1Q9NP08 348 aaPredicted RBP8.33□□□□□ -1.08
PDLIM5-204ENST00000380176 SLC5A4Q9NY91 659 aa8.33□□□□□ -1.08
PDLIM5-204ENST00000380176 SHOC2Q9UQ13 582 aa8.33□□□□□ -1.08
PDLIM5-204ENST00000380176 CAPN7Q9Y6W3 813 aa8.33□□□□□ -1.08
PDLIM5-204ENST00000380176 CLUHO75153 1309 aa8.32□□□□□ -1.08
PDLIM5-204ENST00000380176 RRN3P2A6NIE6 340 aa8.32□□□□□ -1.08
PDLIM5-204ENST00000380176 RASA4BC9J798 803 aa8.32□□□□□ -1.08
PDLIM5-204ENST00000380176 PAPSS1O43252 624 aaPredicted RBP8.32□□□□□ -1.08
PDLIM5-204ENST00000380176 TREHO43280 583 aa8.32□□□□□ -1.08
PDLIM5-204ENST00000380176 RASA4O43374 803 aa8.32□□□□□ -1.08
PDLIM5-204ENST00000380176 TMEM63AO94886 807 aa8.32□□□□□ -1.08
PDLIM5-204ENST00000380176 F2P00734 622 aa8.32□□□□□ -1.08
PDLIM5-204ENST00000380176 PDGFRBP09619 1106 aa8.32□□□□□ -1.08
PDLIM5-204ENST00000380176 FGFR1P11362 822 aa8.32□□□□□ -1.08
PDLIM5-204ENST00000380176 CYP2C9P11712 490 aa8.32□□□□□ -1.08
PDLIM5-204ENST00000380176 IL4RP24394 825 aa8.32□□□□□ -1.08
PDLIM5-204ENST00000380176 LMO2P25791 158 aa8.32□□□□□ -1.08
PDLIM5-204ENST00000380176 SSTR1P30872 391 aa8.32□□□□□ -1.08
PDLIM5-204ENST00000380176 PCK1P35558 622 aa8.32□□□□□ -1.08
PDLIM5-204ENST00000380176 ACAP1Q15027 740 aa8.32□□□□□ -1.08
PDLIM5-204ENST00000380176 ZKSCAN8Q15776 578 aaPredicted RBP8.32□□□□□ -1.08
PDLIM5-204ENST00000380176 GPR162Q16538 588 aa8.32□□□□□ -1.08
PDLIM5-204ENST00000380176 CA9Q16790 459 aa8.32□□□□□ -1.08
PDLIM5-204ENST00000380176 C9orf57Q5W0N0 161 aa8.32□□□□□ -1.08
PDLIM5-204ENST00000380176 FBXW10Q5XX13 1052 aa8.32□□□□□ -1.08
PDLIM5-204ENST00000380176 SCYL2Q6P3W7 929 aa8.32□□□□□ -1.08
PDLIM5-204ENST00000380176 NPAS4Q8IUM7 802 aa8.32□□□□□ -1.08
PDLIM5-204ENST00000380176 C7orf31Q8N865 590 aa8.32□□□□□ -1.08
PDLIM5-204ENST00000380176 TTC13Q8NBP0 860 aa8.32□□□□□ -1.08
PDLIM5-204ENST00000380176 DYDC1Q8WWB3 177 aa8.32□□□□□ -1.08
PDLIM5-204ENST00000380176 PARK7Q99497 189 aaKnown RBP8.32□□□□□ -1.08
PDLIM5-204ENST00000380176 PLEKHA5Q9HAU0 1116 aa8.32□□□□□ -1.08
PDLIM5-204ENST00000380176 NGRNQ9NPE2 291 aaKnown RBP8.32□□□□□ -1.08
PDLIM5-204ENST00000380176 KIAA1257Q9ULG3 409 aa8.32□□□□□ -1.08
PDLIM5-204ENST00000380176 NRCAMQ92823 1304 aa8.32□□□□□ -1.08
PDLIM5-204ENST00000380176 TCP11X1B4DZS4 312 aa8.32□□□□□ -1.08
PDLIM5-204ENST00000380176 ATP2C2O75185 946 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms