RNA–Protein interactions for RNA: ENST00000380075.6

TRIM54-202, Transcript of tripartite motif containing 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM54, Length 1,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-202ENST00000380075 C2CD4BA6NLJ0 364 aa22.53■■□□□ 1.2
TRIM54-202ENST00000380075 DESP17661 470 aa22.53■■□□□ 1.2
TRIM54-202ENST00000380075 ZBTB6Q15916 424 aa22.53■■□□□ 1.2
TRIM54-202ENST00000380075 QPCTQ16769 361 aa22.53■■□□□ 1.2
TRIM54-202ENST00000380075 UNC93AQ86WB7 457 aa22.53■■□□□ 1.2
TRIM54-202ENST00000380075 TMEM130Q8N3G9 435 aa22.53■■□□□ 1.2
TRIM54-202ENST00000380075 CABS1Q96KC9 395 aa22.53■■□□□ 1.2
TRIM54-202ENST00000380075 CITO14578 2027 aa22.53■■□□□ 1.2
TRIM54-202ENST00000380075 ANKRD65E5RJM6 399 aa22.52■■□□□ 1.2
TRIM54-202ENST00000380075 DPYSL4O14531 572 aa22.52■■□□□ 1.2
TRIM54-202ENST00000380075 ALOX15BO15296 676 aa22.52■■□□□ 1.2
TRIM54-202ENST00000380075 ENDOD1O94919 500 aa22.52■■□□□ 1.2
TRIM54-202ENST00000380075 OR6B2Q6IFH4 312 aa22.52■■□□□ 1.2
TRIM54-202ENST00000380075 SLC39A5Q6ZMH5 540 aa22.52■■□□□ 1.2
TRIM54-202ENST00000380075 PPIL6Q8IXY8 311 aa22.52■■□□□ 1.2
TRIM54-202ENST00000380075 RSAD2Q8WXG1 361 aa22.52■■□□□ 1.2
TRIM54-202ENST00000380075 EURLQ9NYK6 297 aa22.52■■□□□ 1.2
TRIM54-202ENST00000380075 FARP1Q9Y4F1 1045 aaPredicted RBP22.52■■□□□ 1.2
TRIM54-202ENST00000380075 ETS1P14921 441 aa22.52■■□□□ 1.2
TRIM54-202ENST00000380075 CYP3A5P20815 502 aa22.52■■□□□ 1.2
TRIM54-202ENST00000380075 TFDP2Q14188 446 aa22.52■■□□□ 1.2
TRIM54-202ENST00000380075 GOLGA7BQ2TAP0 167 aa22.52■■□□□ 1.2
TRIM54-202ENST00000380075 CCDC38Q502W7 563 aa22.52■■□□□ 1.2
TRIM54-202ENST00000380075 PKDCCQ504Y2 493 aa22.52■■□□□ 1.2
TRIM54-202ENST00000380075 FAM47CQ5HY64 1035 aa22.52■■□□□ 1.2
TRIM54-202ENST00000380075 VSIG1Q86XK7 387 aa22.52■■□□□ 1.2
TRIM54-202ENST00000380075 RFX6Q8HWS3 928 aa22.52■■□□□ 1.2
TRIM54-202ENST00000380075 ZDHHC17Q8IUH5 632 aa22.52■■□□□ 1.2
TRIM54-202ENST00000380075 STK32AQ8WU08 396 aa22.52■■□□□ 1.2
TRIM54-202ENST00000380075 PRCCQ92733 491 aaPredicted RBP22.52■■□□□ 1.2
TRIM54-202ENST00000380075 PRMT1Q99873 361 aaKnown RBP22.52■■□□□ 1.2
TRIM54-202ENST00000380075 SNTG2Q9NY99 539 aa22.52■■□□□ 1.2
TRIM54-202ENST00000380075 CNTN3Q9P232 1028 aa22.52■■□□□ 1.2
TRIM54-202ENST00000380075 PCSK1NQ9UHG2 260 aa22.52■■□□□ 1.2
TRIM54-202ENST00000380075 TMEM120BA0PK00 339 aa22.51■■□□□ 1.19
TRIM54-202ENST00000380075 E5RJQ4 531 aa22.51■■□□□ 1.19
TRIM54-202ENST00000380075 MCF2LO15068 1137 aa22.51■■□□□ 1.19
TRIM54-202ENST00000380075 CAPN15O75808 1086 aa22.51■■□□□ 1.19
TRIM54-202ENST00000380075 IFNB1P01574 187 aa22.51■■□□□ 1.19
TRIM54-202ENST00000380075 PFKMP08237 780 aa22.51■■□□□ 1.19
TRIM54-202ENST00000380075 SMIM10L2AP0DMW4 78 aa22.51■■□□□ 1.19
TRIM54-202ENST00000380075 SMIM10L2BP0DMW5 78 aa22.51■■□□□ 1.19
TRIM54-202ENST00000380075 DARSP14868 501 aaKnown RBP22.51■■□□□ 1.19
TRIM54-202ENST00000380075 PDGFRAP16234 1089 aa22.51■■□□□ 1.19
TRIM54-202ENST00000380075 DYNLT1P63172 113 aa22.51■■□□□ 1.19
TRIM54-202ENST00000380075 RASA2Q15283 850 aa22.51■■□□□ 1.19
TRIM54-202ENST00000380075 FAM183BPQ6ZVS7 135 aa22.51■■□□□ 1.19
TRIM54-202ENST00000380075 RXFP2Q8WXD0 754 aa22.51■■□□□ 1.19
TRIM54-202ENST00000380075 DNAI2Q9GZS0 605 aa22.51■■□□□ 1.19
TRIM54-202ENST00000380075 NAALADL1Q9UQQ1 740 aa22.51■■□□□ 1.19
TRIM54-202ENST00000380075 PPARDQ03181 441 aa22.5■■□□□ 1.19
TRIM54-202ENST00000380075 IFT88Q13099 833 aa22.5■■□□□ 1.19
TRIM54-202ENST00000380075 VSTM1Q6UX27 236 aa22.5■■□□□ 1.19
TRIM54-202ENST00000380075 DPH6Q7L8W6 267 aa22.5■■□□□ 1.19
TRIM54-202ENST00000380075 SESTD1Q86VW0 696 aa22.5■■□□□ 1.19
TRIM54-202ENST00000380075 MAP7D3Q8IWC1 876 aa22.5■■□□□ 1.19
TRIM54-202ENST00000380075 C7orf31Q8N865 590 aa22.5■■□□□ 1.19
TRIM54-202ENST00000380075 ANKS4BQ8N8V4 417 aa22.5■■□□□ 1.19
TRIM54-202ENST00000380075 SLC43A3Q8NBI5 491 aa22.5■■□□□ 1.19
TRIM54-202ENST00000380075 HSPH1Q92598 858 aa22.5■■□□□ 1.19
TRIM54-202ENST00000380075 MAK16Q9BXY0 300 aaKnown RBP22.5■■□□□ 1.19
TRIM54-202ENST00000380075 UBN1Q9NPG3 1134 aa22.5■■□□□ 1.19
TRIM54-202ENST00000380075 HESX1Q9UBX0 185 aa22.5■■□□□ 1.19
TRIM54-202ENST00000380075 UBQLN1Q9UMX0 589 aaKnown RBP22.5■■□□□ 1.19
TRIM54-202ENST00000380075 SNX9Q9Y5X1 595 aa22.5■■□□□ 1.19
TRIM54-202ENST00000380075 ARVCFO00192 962 aa22.5■■□□□ 1.19
TRIM54-202ENST00000380075 PRPSAP2O60256 369 aa22.5■■□□□ 1.19
TRIM54-202ENST00000380075 STIP1P31948 543 aaKnown RBP22.5■■□□□ 1.19
TRIM54-202ENST00000380075 PDK2Q15119 407 aa22.5■■□□□ 1.19
TRIM54-202ENST00000380075 BOLA3Q53S33 107 aa22.5■■□□□ 1.19
TRIM54-202ENST00000380075 ARHGAP17Q68EM7 881 aa22.5■■□□□ 1.19
TRIM54-202ENST00000380075 ALKAL1Q6UXT8 129 aa22.5■■□□□ 1.19
TRIM54-202ENST00000380075 CCDC121Q6ZUS5 278 aa22.5■■□□□ 1.19
TRIM54-202ENST00000380075 TMEM110Q86TL2 294 aa22.5■■□□□ 1.19
TRIM54-202ENST00000380075 TEKT4Q8WW24 435 aa22.5■■□□□ 1.19
TRIM54-202ENST00000380075 SLC4A5Q9BY07 1137 aa22.5■■□□□ 1.19
TRIM54-202ENST00000380075 FAM49AQ9H0Q0 323 aaPredicted RBP22.5■■□□□ 1.19
TRIM54-202ENST00000380075 CTNNAL1Q9UBT7 734 aa22.5■■□□□ 1.19
TRIM54-202ENST00000380075 EXOC1LA0A1B0GW35 172 aa22.49■■□□□ 1.19
TRIM54-202ENST00000380075 XPOTO43592 962 aaKnown RBP22.49■■□□□ 1.19
TRIM54-202ENST00000380075 FSBPO95073 299 aa22.49■■□□□ 1.19
TRIM54-202ENST00000380075 CD4P01730 458 aa22.49■■□□□ 1.19
TRIM54-202ENST00000380075 BRAFP15056 766 aa22.49■■□□□ 1.19
TRIM54-202ENST00000380075 CDK7P50613 346 aa22.49■■□□□ 1.19
TRIM54-202ENST00000380075 ARL4CP56559 192 aa22.49■■□□□ 1.19
TRIM54-202ENST00000380075 EIF3EP60228 445 aaKnown RBP22.49■■□□□ 1.19
TRIM54-202ENST00000380075 HIC1Q14526 733 aa22.49■■□□□ 1.19
TRIM54-202ENST00000380075 HIF1AQ16665 826 aa22.49■■□□□ 1.19
TRIM54-202ENST00000380075 LRRC26Q2I0M4 334 aa22.49■■□□□ 1.19
TRIM54-202ENST00000380075 CCDC197Q8NCU1 140 aa22.49■■□□□ 1.19
TRIM54-202ENST00000380075 DYDC1Q8WWB3 177 aa22.49■■□□□ 1.19
TRIM54-202ENST00000380075 ZMAT2Q96NC0 199 aaKnown RBP22.49■■□□□ 1.19
TRIM54-202ENST00000380075 TBCBQ99426 244 aa22.49■■□□□ 1.19
TRIM54-202ENST00000380075 MRPL45Q9BRJ2 306 aaKnown RBP22.49■■□□□ 1.19
TRIM54-202ENST00000380075 CALN1Q9BXU9 219 aa22.49■■□□□ 1.19
TRIM54-202ENST00000380075 ACTR5Q9H9F9 607 aaPredicted RBP22.49■■□□□ 1.19
TRIM54-202ENST00000380075 SAMD15Q9P1V8 674 aa22.49■■□□□ 1.19
TRIM54-202ENST00000380075 FETUBQ9UGM5 382 aa22.49■■□□□ 1.19
TRIM54-202ENST00000380075 SCN10AQ9Y5Y9 1956 aa22.49■■□□□ 1.19
TRIM54-202ENST00000380075 KAT6AQ92794 2004 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms